##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934317.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1539937 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.38504432324179 33.0 31.0 34.0 31.0 34.0 2 32.56122360849827 34.0 31.0 34.0 31.0 34.0 3 32.60790408958289 34.0 31.0 34.0 31.0 34.0 4 36.076295328964754 37.0 35.0 37.0 35.0 37.0 5 35.141435656133986 37.0 35.0 37.0 35.0 37.0 6 25.867613415354004 37.0 0.0 37.0 0.0 37.0 7 30.984370139817408 37.0 19.0 37.0 17.0 37.0 8 34.73554177865718 37.0 32.0 37.0 32.0 37.0 9 37.261616546650934 39.0 37.0 39.0 35.0 39.0 10 37.43473401833971 39.0 37.0 39.0 35.0 39.0 11 37.471113428666236 39.0 37.0 39.0 35.0 39.0 12 37.092688207374714 39.0 37.0 39.0 34.0 39.0 13 37.05986348792191 39.0 37.0 39.0 33.0 39.0 14 37.94739005556721 40.0 37.0 41.0 33.0 41.0 15 38.16680162889781 40.0 37.0 41.0 33.0 41.0 16 38.337974865205524 40.0 37.0 41.0 33.0 41.0 17 38.364813625492474 40.0 37.0 41.0 34.0 41.0 18 38.34411862303458 40.0 37.0 41.0 34.0 41.0 19 38.32876474816827 40.0 37.0 41.0 34.0 41.0 20 38.23409139464796 40.0 37.0 41.0 34.0 41.0 21 38.12855136281549 40.0 36.0 41.0 34.0 41.0 22 38.161593623635255 40.0 36.0 41.0 34.0 41.0 23 38.13125601891506 40.0 36.0 41.0 34.0 41.0 24 38.083206001284466 40.0 36.0 41.0 34.0 41.0 25 37.94121253012298 40.0 36.0 41.0 34.0 41.0 26 37.88928443176572 40.0 35.0 41.0 34.0 41.0 27 37.85185887474618 40.0 35.0 41.0 34.0 41.0 28 37.751886603153245 40.0 35.0 41.0 34.0 41.0 29 37.706449030057726 40.0 35.0 41.0 33.0 41.0 30 37.45730766907997 40.0 35.0 41.0 33.0 41.0 31 37.410131713180476 39.0 35.0 41.0 33.0 41.0 32 37.32904462974784 39.0 35.0 41.0 33.0 41.0 33 37.23463752088559 39.0 35.0 41.0 33.0 41.0 34 37.06977947799163 39.0 35.0 41.0 32.0 41.0 35 36.99121132877514 39.0 35.0 41.0 32.0 41.0 36 36.89854390147129 39.0 35.0 41.0 32.0 41.0 37 36.798587864308736 39.0 35.0 41.0 31.0 41.0 38 36.69251534316014 39.0 35.0 41.0 31.0 41.0 39 36.63698255188362 39.0 35.0 41.0 31.0 41.0 40 36.51273396249327 39.0 35.0 41.0 31.0 41.0 41 36.37175806542735 39.0 35.0 41.0 31.0 41.0 42 36.32019946270529 39.0 35.0 40.0 31.0 41.0 43 36.2352966387586 38.0 35.0 40.0 31.0 41.0 44 36.096997474572014 38.0 35.0 40.0 30.0 41.0 45 36.082397526652066 38.0 35.0 40.0 30.0 41.0 46 36.058982932418665 38.0 35.0 40.0 30.0 41.0 47 35.972763171480395 38.0 35.0 40.0 30.0 41.0 48 35.90340838618723 38.0 35.0 40.0 30.0 41.0 49 35.85677790714815 38.0 35.0 40.0 30.0 41.0 50 35.74605909202779 37.0 35.0 40.0 30.0 41.0 51 34.66689221701927 36.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 11.0 10 25.0 11 12.0 12 10.0 13 15.0 14 16.0 15 49.0 16 78.0 17 159.0 18 309.0 19 574.0 20 996.0 21 1697.0 22 2491.0 23 3846.0 24 6040.0 25 8953.0 26 11924.0 27 13949.0 28 15905.0 29 19172.0 30 24261.0 31 32666.0 32 46814.0 33 77645.0 34 113070.0 35 128237.0 36 151449.0 37 244970.0 38 320232.0 39 314129.0 40 226.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.735946990039203 4.330761583103724 53.84928084720349 17.084010579653583 2 21.69387448967068 4.115428098681959 51.61847530126232 22.572222110385034 3 22.02849856844793 4.2497193066989105 51.03572418871681 22.686057936136347 4 19.65437547120434 4.694477761103214 50.46232410806416 25.188822659628286 5 18.079246099028726 8.100136564028269 49.07298155703772 24.747635779905284 6 16.60613388729539 31.664152494550102 38.282150503559556 13.44756311459495 7 83.35847505449898 2.1664522639562525 9.944757480338481 4.530315201206283 8 84.668593585322 2.487179670337163 8.516257483260679 4.3279692610801614 9 78.79504161533882 4.595447735848934 10.99804732271515 5.611463326097107 10 45.03190714944832 22.48611469170492 17.836054332092807 14.64592382675395 11 33.5529310614655 22.228571688322315 25.16265275787256 19.05584449233962 12 30.27604376023175 19.57437219834318 29.97635617560978 20.173227865815292 13 27.90971318956555 19.693662792698664 31.834614013430418 20.56201000430537 14 21.690822416761204 20.994754980236205 35.308847050236466 22.005575552766118 15 19.86776082398176 21.388732136444546 36.424866731561096 22.3186403080126 16 26.06983272692324 21.863881444500652 30.635603924056632 21.43068190451947 17 25.778587046093442 22.722812686493018 28.379277853574532 23.119322413839008 18 26.19451315216142 21.633936972746287 30.536508961080877 21.635040914011416 19 25.471756312108873 24.060464811222797 28.34245816549638 22.125320711171952 20 25.175640302168205 27.27760940869659 27.892699506538253 19.65405078259695 21 25.082779360454353 25.338309294471138 30.586900632947973 18.992010712126536 22 24.056113983883755 21.660366625387923 31.816496389138 22.467023001590324 23 22.992044479741704 22.89061175879273 30.65203316759062 23.465310593874943 24 23.190753907465044 24.149429489647954 29.702254053250233 22.95756254963677 25 24.612110755180243 24.19176888405175 26.774601818126325 24.421518542641678 26 22.672291139182967 24.658216537429777 27.04019709897223 25.629295224415028 27 22.680343416646267 23.402256066319595 30.520209592989843 23.397190924044295 28 20.250308941209934 24.690230834118537 28.681887635663017 26.377572589008512 29 22.300133057391307 25.925735922963085 27.448005989855428 24.32612502979018 30 25.980348546726262 23.509987746251955 28.039913321129372 22.46975038589241 31 25.050310499715252 25.025504290110568 27.36436620459149 22.559819005582696 32 26.55011211497613 25.344673191176003 25.14518451079492 22.960030183052943 33 27.452421754915946 24.243719061234323 24.879394416784585 23.424464767065146 34 23.189325277592527 25.324997061568105 28.37395296041332 23.111724700426056 35 23.35615028407006 28.1414759175213 25.395649302536405 23.106724495872232 36 26.00970039683442 28.441812879358054 23.84006618452573 21.708420539281803 37 24.174690263302978 28.467528217063425 24.783286588996823 22.574494930636774 38 23.866430899445888 27.191372114573518 25.637996879093105 23.30420010688749 39 23.764153988117695 24.98433377469338 25.437599070611327 25.813913166577596 40 26.535825816250924 24.013579776315524 26.818629593288556 22.631964814144993 41 23.33835734838503 24.66730781843673 26.041000378586915 25.953334454591324 42 23.381670808611002 24.277876302731865 27.935168776385005 24.405284112272124 43 23.371215835453008 22.965095325328242 29.11171041412733 24.551978425091416 44 23.715450697009032 23.213676923146856 27.077341475657768 25.99353090418634 45 22.946588074706952 23.170428400642365 26.132952192200072 27.750031332450614 46 22.965809640264503 23.641291819080912 27.625480782655394 25.76741775799919 47 21.05099104703634 25.45870383009175 29.401397589641654 24.088907533230255 48 21.42269456477765 26.237696736944432 28.25122066681949 24.08838803145843 49 24.28417526171525 23.69811232537435 28.013483668487737 24.00422874442266 50 22.08447488436215 24.115142372707453 27.39956244963268 26.400820293297713 51 21.104694542698823 24.43703865807497 25.945671803456893 28.51259499576931 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 339.0 1 1026.0 2 1713.0 3 8464.5 4 15216.0 5 9559.5 6 3903.0 7 3739.0 8 3575.0 9 3603.0 10 3631.0 11 3577.5 12 3524.0 13 3524.5 14 3525.0 15 3483.0 16 3441.0 17 3296.5 18 3152.0 19 3321.5 20 3491.0 21 3847.0 22 4203.0 23 4934.5 24 5666.0 25 6819.0 26 8953.0 27 9934.0 28 12052.0 29 14170.0 30 15995.0 31 17820.0 32 21727.5 33 25635.0 34 29127.0 35 32619.0 36 34405.0 37 36191.0 38 40320.0 39 44449.0 40 49826.0 41 55203.0 42 62043.5 43 68884.0 44 78619.5 45 88355.0 46 103840.5 47 119326.0 48 136661.5 49 153997.0 50 154274.0 51 154551.0 52 140541.0 53 126531.0 54 115658.0 55 104785.0 56 98144.0 57 91503.0 58 88020.0 59 84537.0 60 76256.0 61 67975.0 62 60218.5 63 52462.0 64 46051.5 65 39641.0 66 34737.5 67 29834.0 68 26145.5 69 22457.0 70 18272.0 71 14087.0 72 11937.0 73 9787.0 74 7901.0 75 4484.0 76 2953.0 77 2270.5 78 1588.0 79 1151.0 80 714.0 81 530.0 82 346.0 83 250.5 84 155.0 85 101.0 86 47.0 87 30.5 88 14.0 89 9.5 90 5.0 91 7.0 92 9.0 93 6.0 94 3.0 95 3.0 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1539937.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.5016241357239 #Duplication Level Percentage of deduplicated Percentage of total 1 72.73175338927442 25.093636181689092 2 10.366734696838204 7.153383680501589 3 3.758683046330219 3.890420091294088 4 1.929077700373527 2.662252549875762 5 1.2921898037149713 2.2291323459894397 6 0.9331113117460672 1.9316313452793061 7 0.8116378306475807 1.9601976357136013 8 0.7069569521739514 1.951293043523409 9 0.6182610735607399 1.9197910059967616 >10 6.6777182355964975 42.531007999001815 >50 0.11460497341674997 2.7535132805221103 >100 0.0542266491863451 3.368285457545064 >500 0.0027323492845959243 0.6540196396109633 >1k 0.0021018071419968646 1.3836732169216976 >5k 2.101807141996865E-4 0.5177625265353452 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7140 0.4636553313544645 No Hit CTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCTGCT 2859 0.18565694570622043 No Hit CCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCTGC 2792 0.18130611836717994 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2765 0.1795527998872681 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2131 0.13838228447007897 No Hit GCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCTGC 2018 0.13104432194304053 No Hit TCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCTGC 1697 0.1101993133485331 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.19883930316629836 0.0 2 0.0 0.0 0.0 0.6684039671752805 0.0 3 0.0 0.0 0.0 0.9999759730430531 0.0 4 0.0 0.0 0.0 1.374601688250883 0.0 5 0.0 0.0 0.0 2.1132682700655936 0.0 6 0.0 0.0 0.0 2.8531037308669123 0.0 7 0.0 0.0 0.0 3.7109310315941495 0.0 8 0.0 0.0 0.0 5.011633592802823 0.0 9 0.0 0.0 0.0 5.804133545722975 0.0 10 0.0 0.0 0.0 6.94307624272941 0.0 11 0.0 0.0 0.0 8.811074738771781 0.0 12 0.0 0.0 0.0 10.225743001174724 0.0 13 0.0 0.0 0.0 10.750180039832799 0.0 14 0.0 0.0 0.0 11.022593781433915 0.0 15 0.0 0.0 0.0 11.31403427542815 0.0 16 0.0 0.0 0.0 11.861199516603602 0.0 17 0.0 0.0 0.0 12.564864666541553 0.0 18 0.0 0.0 0.0 13.306258632658349 0.0 19 0.0 0.0 0.0 13.860437147753448 0.0 20 0.0 0.0 0.0 14.498060634948054 0.0 21 0.0 0.0 0.0 15.371018424779715 0.0 22 0.0 0.0 0.0 16.279821836867352 0.0 23 0.0 0.0 0.0 17.13219436899042 0.0 24 6.493772147821631E-5 0.0 0.0 17.793585062246052 0.0 25 6.493772147821631E-5 0.0 0.0 18.428351289695616 0.0 26 6.493772147821631E-5 0.0 0.0 18.978503666059066 0.0 27 6.493772147821631E-5 0.0 0.0 19.617490845404713 0.0 28 6.493772147821631E-5 0.0 0.0 20.173422678979726 0.0 29 6.493772147821631E-5 0.0 0.0 20.831046984389623 0.0 30 6.493772147821631E-5 0.0 0.0 21.67536723904939 0.0 31 6.493772147821631E-5 0.0 0.0 22.301431811820873 0.0 32 6.493772147821631E-5 0.0 0.0 22.905742247897155 0.0 33 6.493772147821631E-5 0.0 0.0 23.490766180694404 0.0 34 6.493772147821631E-5 0.0 0.0 24.158780521540816 0.0 35 6.493772147821631E-5 0.0 0.0 24.880433420328234 0.0 36 6.493772147821631E-5 0.0 0.0 25.49883534196529 0.0 37 6.493772147821631E-5 0.0 0.0 26.123276471699818 0.0 38 6.493772147821631E-5 0.0 0.0 26.86226774212192 0.0 39 6.493772147821631E-5 0.0 0.0 28.22920677923837 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACATA 20 7.034034E-4 45.0 26 CGTTAGG 410 0.0 43.353657 2 TCGTTAG 220 0.0 42.954548 1 CGTTTAT 1320 0.0 42.78409 1 TTTAGGG 5755 0.0 41.403126 3 TTAGGGA 2535 0.0 41.094677 4 CTTTAGG 1670 0.0 41.092815 2 CGTTTTT 2685 0.0 40.223465 1 TAGGGAC 1090 0.0 40.04587 5 TTTTAGG 3250 0.0 39.807693 2 TGTAGGG 1795 0.0 39.735374 3 CCGTTAG 85 0.0 39.705883 1 CTAGGGA 1555 0.0 39.501606 4 TTAGGGG 5810 0.0 39.38468 4 TTAGGGT 895 0.0 39.217876 4 GTTAGGG 2065 0.0 39.116222 3 TAGGGGA 2935 0.0 39.097103 5 TAGGGTG 505 0.0 38.76238 5 CTTAGGG 2610 0.0 38.706894 3 TAGGGGG 4750 0.0 38.652634 5 >>END_MODULE