##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934315.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 675971 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.34187709236047 33.0 31.0 34.0 31.0 34.0 2 32.52433314446922 34.0 31.0 34.0 31.0 34.0 3 32.564743162058726 34.0 31.0 34.0 31.0 34.0 4 36.03927535352848 37.0 35.0 37.0 35.0 37.0 5 35.24533596855486 37.0 35.0 37.0 35.0 37.0 6 26.659874462070118 37.0 15.0 37.0 0.0 37.0 7 31.39499031763197 37.0 19.0 37.0 17.0 37.0 8 34.8141192447605 37.0 32.0 37.0 32.0 37.0 9 37.29727310787001 39.0 37.0 39.0 35.0 39.0 10 37.369039500215244 39.0 37.0 39.0 34.0 39.0 11 37.42642213941131 39.0 37.0 39.0 35.0 39.0 12 37.17753720203973 39.0 37.0 39.0 34.0 39.0 13 37.18869448541432 39.0 37.0 39.0 34.0 39.0 14 38.37557380420166 40.0 38.0 41.0 34.0 41.0 15 38.51128820615086 40.0 38.0 41.0 34.0 41.0 16 38.578299956654945 40.0 38.0 41.0 35.0 41.0 17 38.55752095873935 40.0 38.0 41.0 35.0 41.0 18 38.53580553011889 40.0 38.0 41.0 35.0 41.0 19 38.5407909510911 40.0 37.0 41.0 35.0 41.0 20 38.468054102912696 40.0 37.0 41.0 34.0 41.0 21 38.34951943204664 40.0 37.0 41.0 34.0 41.0 22 38.328151651476176 40.0 37.0 41.0 34.0 41.0 23 38.2701669154446 40.0 37.0 41.0 34.0 41.0 24 38.21799899699839 40.0 37.0 41.0 34.0 41.0 25 38.10669688492553 40.0 37.0 41.0 34.0 41.0 26 38.03027496741724 40.0 36.0 41.0 34.0 41.0 27 37.97235532293545 40.0 36.0 41.0 34.0 41.0 28 37.89492300705208 40.0 36.0 41.0 34.0 41.0 29 37.85624827100571 40.0 36.0 41.0 34.0 41.0 30 37.60952023089748 40.0 36.0 41.0 33.0 41.0 31 37.649307440703815 40.0 36.0 41.0 33.0 41.0 32 37.55300301344288 40.0 36.0 41.0 33.0 41.0 33 37.44552059185971 40.0 36.0 41.0 33.0 41.0 34 37.392028652116736 40.0 36.0 41.0 33.0 41.0 35 37.317020996462865 40.0 35.0 41.0 33.0 41.0 36 37.1960261608856 39.0 35.0 41.0 32.0 41.0 37 37.10008121650189 39.0 35.0 41.0 32.0 41.0 38 37.01723002909888 39.0 35.0 41.0 32.0 41.0 39 36.99733864322582 39.0 35.0 41.0 32.0 41.0 40 36.96350878957825 39.0 35.0 41.0 32.0 41.0 41 36.86391723905315 39.0 35.0 41.0 31.0 41.0 42 36.80317350892272 39.0 35.0 41.0 31.0 41.0 43 36.69248680786602 39.0 35.0 41.0 31.0 41.0 44 36.55461254994667 39.0 35.0 41.0 31.0 41.0 45 36.52442930244049 39.0 35.0 41.0 31.0 41.0 46 36.451060770358495 39.0 35.0 41.0 31.0 41.0 47 36.37369798408512 39.0 35.0 40.0 31.0 41.0 48 36.33371993768964 39.0 35.0 40.0 31.0 41.0 49 36.30647172733742 39.0 35.0 40.0 31.0 41.0 50 36.22120327647192 39.0 35.0 40.0 31.0 41.0 51 35.19517109461796 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 4.0 10 6.0 11 6.0 12 5.0 13 4.0 14 7.0 15 8.0 16 21.0 17 43.0 18 102.0 19 185.0 20 350.0 21 613.0 22 970.0 23 1544.0 24 2359.0 25 3609.0 26 4867.0 27 5886.0 28 6616.0 29 7759.0 30 9598.0 31 12575.0 32 17216.0 33 27392.0 34 42229.0 35 56288.0 36 62611.0 37 105134.0 38 148801.0 39 159063.0 40 97.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.728933637685643 4.5749004025320605 53.215596527069955 19.48056943271235 2 20.907109920395996 4.528300770299317 52.82253232757027 21.74205698173442 3 20.736096666868846 4.383620007367179 52.47473634223954 22.40554698352444 4 19.149194270168397 4.849468394354195 51.5547264601588 24.446610875318616 5 17.917336690479324 7.8126132629950105 49.533190033300244 24.73686001322542 6 16.74287802287376 30.03501629507775 39.41914667936938 13.802959002679108 7 82.44051889800006 2.1468376601954815 10.67767700093643 4.734966440868026 8 82.98477301541043 2.9098881460891075 8.857036766370156 5.248302072130313 9 77.36249040269479 4.742067337208253 11.921221472518791 5.974220787578165 10 39.04220743197563 24.994415440899093 19.95100381525243 16.012373311872846 11 29.18705092378223 25.501685723204105 25.398870661611223 19.91239269140244 12 27.526476727551923 21.59708034812144 31.237878548044222 19.638564376282414 13 24.18328596936851 24.009905750394616 31.861426007920457 19.94538227231642 14 18.843855727538607 27.404134201023417 31.103109452920318 22.648900618517658 15 18.336733380574017 25.68083542045443 35.20994243835904 20.77248876061251 16 19.586047330432816 24.18432151675146 33.81062205331294 22.41900909950279 17 19.042828760405403 24.453563836318423 30.87099890379913 25.63260849947705 18 20.24199262986134 24.471316077168993 32.692970556429195 22.593720736540472 19 22.318413068016234 25.87951258264038 29.50378048762447 22.29829386171892 20 25.06069047340788 25.07178562393949 30.004097808929675 19.863426093722953 21 24.167161017262575 26.166359207717495 29.754974695660017 19.911505079359916 22 21.99088422432323 24.732126082331934 28.971805003469083 24.30518468987575 23 21.81336181581754 25.80717220117431 28.4211896664206 23.958276316587547 24 22.47892291237346 23.756048706231482 29.978800865717613 23.786227515677446 25 21.39721970321212 25.449612483375766 28.2781361922331 24.875031621179016 26 21.16510915409093 26.531315692537106 28.88319173455666 23.420383418815305 27 21.1096334014329 26.29402740650117 30.57409267557336 22.022246516492572 28 19.939760729380403 25.175488297574894 32.27875160324925 22.605999369795448 29 21.390562612893156 23.154543612078033 32.852296918063054 22.602596856965757 30 22.148435361872032 23.390796350731023 31.900185067110865 22.560583220286077 31 22.941812592552047 25.72521602258085 27.99602349804947 23.33694788681763 32 23.65929899359588 25.86205621247065 28.44752215701561 22.031122636917853 33 22.492237093011386 24.441433138403866 30.513439186000586 22.552890582584165 34 21.898572571900274 23.175698365758294 30.498497716618022 24.42723134572341 35 22.502444631500467 22.722276547366675 29.658520853705262 25.116757967427596 36 23.391683962773552 24.252371773345306 30.63489410048656 21.721050163394583 37 21.987925517514807 24.804318528457582 31.948116117407405 21.25963983662021 38 22.294595478208386 24.615257163399022 30.542878318744442 22.547269039648153 39 20.658430613147605 23.302922758520705 32.92005130397605 23.11859532435563 40 22.892106318170455 22.02505728796058 31.51747634144068 23.565360052428286 41 20.973532888245206 23.40632956147527 29.628194108918876 25.99194344136065 42 23.143300526206005 22.690470449176072 29.83308455540252 24.333144469215394 43 22.738253564132187 22.70703920730327 31.8720773524308 22.68262987613374 44 21.918839713538006 23.491984123579265 30.05735453148138 24.531821631401346 45 22.63854514468816 22.369006954440355 28.784518862495577 26.207929038375905 46 22.916071843318722 22.80867078617278 30.74540179978135 23.529855570727147 47 20.563899930618327 23.305881465329133 32.77329944627802 23.35691915777452 48 21.42858199538146 21.046021205051694 33.539900380341756 23.985496419225086 49 21.738210662883468 21.18404487766487 33.741684184676565 23.3360602747751 50 21.554031164058813 20.956520324096743 31.506824996930344 25.9826235149141 51 20.269804473860564 21.02102013252048 29.412356447244036 29.29681894637492 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 118.0 1 539.5 2 961.0 3 3296.5 4 5632.0 5 3796.0 6 1960.0 7 1881.0 8 1802.0 9 1903.5 10 2005.0 11 2046.5 12 2088.0 13 2014.5 14 1941.0 15 1881.5 16 1822.0 17 1752.5 18 1683.0 19 1722.5 20 1762.0 21 1939.0 22 2116.0 23 2490.0 24 2864.0 25 3289.0 26 4836.5 27 5959.0 28 6739.5 29 7520.0 30 8937.5 31 10355.0 32 11673.0 33 12991.0 34 14759.0 35 16527.0 36 18611.5 37 20696.0 38 23149.5 39 25603.0 40 29758.0 41 33913.0 42 37438.0 43 40963.0 44 45162.0 45 49361.0 46 55932.0 47 62503.0 48 70093.5 49 77684.0 50 74313.5 51 70943.0 52 59864.0 53 48785.0 54 42400.0 55 36015.0 56 32639.5 57 29264.0 58 26975.5 59 24687.0 60 23555.5 61 22424.0 62 19524.5 63 16625.0 64 13396.5 65 10168.0 66 8910.5 67 7653.0 68 6326.0 69 4999.0 70 4360.5 71 3722.0 72 3172.0 73 2622.0 74 2131.0 75 1295.0 76 950.0 77 722.5 78 495.0 79 385.0 80 275.0 81 182.0 82 89.0 83 68.5 84 48.0 85 29.0 86 10.0 87 9.5 88 9.0 89 5.5 90 2.0 91 1.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 675971.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.83614333727801 #Duplication Level Percentage of deduplicated Percentage of total 1 70.75588850512814 25.356181624262337 2 11.509741474196217 8.249294904886183 3 4.37846220751451 4.70721597796034 4 2.312765472473716 3.3152237990830224 5 1.5368035394268174 2.7536555960067806 6 1.2048602649972806 2.590652709469999 7 0.9433332108245903 2.3663796910547297 8 0.8017461950517805 2.2985193252794285 9 0.6614348161258012 2.133294559105531 >10 5.758698583272037 38.78628314195931 >50 0.09013851155508436 2.210044450005754 >100 0.04104899344131867 2.5417103495632984 >500 0.002539112996370227 0.6452850559303004 >1k 0.002539112996370227 2.0462588154330303 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC 3642 0.5387805098147702 No Hit CTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGCT 2747 0.40637838013760946 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2478 0.36658377356425054 No Hit TCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC 1821 0.2693902549073851 No Hit GCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC 1801 0.2664315480989569 No Hit CCTGTATCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGC 1004 0.14852708178309423 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 873 0.1291475521878897 No Hit CTGTCACTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTGCT 808 0.11953175506049815 Illumina Single End Adapter 1 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTG 771 0.11405814746490604 No Hit TCCTGTCTCTTATACACATCTGACGCGTGTTCGTTCGTATGCCGTCTTCTG 750 0.11095150531605646 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4793534042140862E-4 0.0 0.0 0.43241500005177735 0.0 2 1.4793534042140862E-4 0.0 0.0 1.6087968270828186 0.0 3 1.4793534042140862E-4 0.0 0.0 2.2190301063211293 0.0 4 1.4793534042140862E-4 0.0 0.0 2.8390271180272526 0.0 5 1.4793534042140862E-4 0.0 0.0 3.8751662423387985 0.0 6 1.4793534042140862E-4 0.0 0.0 4.532147089150274 0.0 7 1.4793534042140862E-4 0.0 0.0 5.317387876107111 0.0 8 1.4793534042140862E-4 0.0 0.0 6.555014934072616 0.0 9 1.4793534042140862E-4 0.0 0.0 7.1082931072486835 0.0 10 1.4793534042140862E-4 0.0 0.0 8.227867763557905 0.0 11 1.4793534042140862E-4 0.0 0.0 10.30473200773406 0.0 12 1.4793534042140862E-4 0.0 0.0 12.13853848759784 0.0 13 1.4793534042140862E-4 0.0 0.0 12.719480569432712 0.0 14 1.4793534042140862E-4 0.0 0.0 12.931176041575748 0.0 15 1.4793534042140862E-4 0.0 0.0 13.264326428204761 0.0 16 1.4793534042140862E-4 0.0 0.0 14.075751770416186 0.0 17 1.4793534042140862E-4 0.0 0.0 15.138223385322743 0.0 18 1.4793534042140862E-4 0.0 0.0 16.342860862374273 0.0 19 1.4793534042140862E-4 0.0 0.0 17.11863378754414 0.0 20 1.4793534042140862E-4 0.0 0.0 17.941450150968016 0.0 21 1.4793534042140862E-4 0.0 0.0 19.114281529828943 0.0 22 1.4793534042140862E-4 0.0 0.0 20.2797161416688 0.0 23 1.4793534042140862E-4 0.0 0.0 21.369555794553317 0.0 24 1.4793534042140862E-4 0.0 0.0 22.25539261299671 0.0 25 1.4793534042140862E-4 0.0 0.0 23.024656383188034 0.0 26 1.4793534042140862E-4 0.0 0.0 23.693324121892804 0.0 27 1.4793534042140862E-4 0.0 0.0 24.36095631321462 0.0 28 1.4793534042140862E-4 0.0 0.0 25.048559775493327 0.0 29 1.4793534042140862E-4 0.0 0.0 25.78113558126014 0.0 30 1.4793534042140862E-4 0.0 0.0 26.594484082897047 0.0 31 1.4793534042140862E-4 0.0 0.0 27.33194175489777 0.0 32 1.4793534042140862E-4 0.0 0.0 28.062298530558262 0.0 33 1.4793534042140862E-4 0.0 0.0 28.757446695198464 0.0 34 1.4793534042140862E-4 0.0 0.0 29.44904441166855 0.0 35 1.4793534042140862E-4 0.0 0.0 30.1749631271164 0.0 36 2.9587068084281724E-4 0.0 0.0 30.846441637289175 0.0 37 2.9587068084281724E-4 0.0 0.0 31.536707935695468 0.0 38 2.9587068084281724E-4 0.0 0.0 32.25389846605845 0.0 39 2.9587068084281724E-4 0.0 0.0 32.95599959169846 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGCGAT 25 3.8890947E-5 45.0 21 TCGTTGA 50 2.1827873E-11 45.0 24 ACGCATA 20 7.0312223E-4 45.0 34 ACTTCGC 20 7.0312223E-4 45.0 31 ACGGGTA 20 7.0312223E-4 45.0 5 AGACGGT 25 3.8890947E-5 45.0 17 CGTGTAG 25 3.8890947E-5 45.0 20 CGTAAGC 20 7.0312223E-4 45.0 39 TGTCGAA 20 7.0312223E-4 45.0 40 GTTACGT 30 2.16417E-6 44.999996 31 CCGTAAC 30 2.16417E-6 44.999996 13 ATAAGCG 30 2.16417E-6 44.999996 33 TCCGTAA 30 2.16417E-6 44.999996 12 TTACGTA 30 2.16417E-6 44.999996 32 TAGGGAC 500 0.0 43.649998 5 TTAGGGA 1300 0.0 42.923077 4 CGCTAGG 90 0.0 42.5 2 CGTTTAT 460 0.0 42.06522 1 AGGGCGA 355 0.0 41.830986 6 CATTCTA 70 0.0 41.785713 45 >>END_MODULE