##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934314.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1688786 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.21127958190085 33.0 31.0 34.0 30.0 34.0 2 32.42236138859512 34.0 31.0 34.0 31.0 34.0 3 32.311731622597534 34.0 31.0 34.0 30.0 34.0 4 35.971606230748 37.0 35.0 37.0 35.0 37.0 5 35.12181709227812 37.0 35.0 37.0 35.0 37.0 6 25.972478454937452 36.0 0.0 37.0 0.0 37.0 7 31.02210345182871 37.0 19.0 37.0 17.0 37.0 8 34.64248696992988 37.0 32.0 37.0 32.0 37.0 9 37.22114998584782 39.0 37.0 39.0 34.0 39.0 10 37.39230370218607 39.0 37.0 39.0 34.0 39.0 11 37.46229421608185 39.0 37.0 39.0 35.0 39.0 12 37.29334030481068 39.0 37.0 39.0 34.0 39.0 13 37.33272480941931 39.0 37.0 39.0 34.0 39.0 14 38.50934931957039 40.0 38.0 41.0 34.0 41.0 15 38.5916688082445 40.0 38.0 41.0 34.0 41.0 16 38.67477169990751 40.0 38.0 41.0 35.0 41.0 17 38.62600590009628 40.0 38.0 41.0 34.0 41.0 18 38.464152355597456 40.0 38.0 41.0 34.0 41.0 19 38.342408096703785 40.0 37.0 41.0 34.0 41.0 20 38.121545299404424 40.0 36.0 41.0 34.0 41.0 21 37.99745379225077 39.0 36.0 41.0 34.0 41.0 22 37.96408011435434 39.0 36.0 41.0 34.0 41.0 23 37.855104791252415 39.0 35.0 41.0 34.0 41.0 24 37.78068150730762 39.0 35.0 41.0 34.0 41.0 25 37.66241015735564 39.0 35.0 41.0 33.0 41.0 26 37.60985939011811 39.0 35.0 41.0 33.0 41.0 27 37.56164842673968 39.0 35.0 41.0 33.0 41.0 28 37.46050358067866 39.0 35.0 41.0 33.0 41.0 29 37.406268763478614 39.0 35.0 41.0 33.0 41.0 30 37.06056066310355 39.0 35.0 41.0 33.0 41.0 31 36.94389164760958 39.0 35.0 41.0 32.0 41.0 32 36.61651979587704 39.0 35.0 41.0 31.0 41.0 33 36.14165501135135 39.0 35.0 41.0 30.0 41.0 34 35.76755314172429 39.0 35.0 41.0 26.0 41.0 35 35.55293743553061 39.0 35.0 41.0 24.0 41.0 36 35.40842652651076 39.0 35.0 41.0 23.0 41.0 37 35.32620947828795 39.0 35.0 41.0 23.0 41.0 38 35.2111605614921 39.0 35.0 41.0 23.0 41.0 39 35.13144353399424 39.0 35.0 41.0 22.0 41.0 40 35.00835096927616 39.0 35.0 41.0 21.0 41.0 41 34.888725392086386 39.0 35.0 40.0 21.0 41.0 42 34.83998505435265 39.0 35.0 40.0 20.0 41.0 43 34.77204157305899 39.0 35.0 40.0 20.0 41.0 44 34.651712531960825 38.0 35.0 40.0 18.0 41.0 45 34.63685511367337 38.0 35.0 40.0 20.0 41.0 46 34.56693151174868 38.0 34.0 40.0 20.0 41.0 47 34.46414880274943 38.0 34.0 40.0 20.0 41.0 48 34.408408762270646 38.0 34.0 40.0 19.0 41.0 49 34.40927151219871 38.0 34.0 40.0 18.0 41.0 50 34.30633958358253 38.0 34.0 40.0 18.0 41.0 51 33.397146234040314 37.0 33.0 40.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 13.0 10 9.0 11 9.0 12 5.0 13 17.0 14 12.0 15 43.0 16 89.0 17 207.0 18 403.0 19 867.0 20 1637.0 21 3024.0 22 4980.0 23 8678.0 24 16064.0 25 27080.0 26 36854.0 27 37735.0 28 33448.0 29 30708.0 30 31136.0 31 36442.0 32 46710.0 33 67503.0 34 97499.0 35 123703.0 36 151781.0 37 244453.0 38 340043.0 39 347450.0 40 180.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.79785597464688 3.6310698928105754 47.3625432707282 26.208530861814346 2 29.844278671187467 6.882340332049177 43.6970699662361 19.576311030527254 3 16.62940123852282 7.014091779538674 55.651752205430405 20.704754776508093 4 15.628800807207071 3.7095878341009456 58.1421802407173 22.519431117974687 5 17.503757136783467 7.0082295803020624 53.241204036509075 22.246809246405405 6 13.856344143070821 31.719531071432378 42.21878911833708 12.205335667159723 7 70.59799169344132 1.514815968393864 22.638155456049493 5.249036882115318 8 71.07916574391308 3.2997076006077735 20.26165541400746 5.3594712414716845 9 65.90912051615776 3.4929233188811373 22.018894045782 8.579062119179103 10 33.57713765983375 20.603143323073496 29.482006601191625 16.337712415901127 11 23.733794571958793 21.13695873840735 35.97157958438784 19.157667105246016 12 21.25888063970213 18.633089094769854 39.51045307102262 20.5975771945054 13 20.622328702393318 18.64072771801756 42.69220611729372 18.0447374622954 14 17.28809926183661 22.07781210881663 41.39328488038153 19.24080374896523 15 15.566922037487283 22.763334134697942 43.696004111829446 17.973739715985328 16 18.473566218573577 23.291464993196296 38.80142303406116 19.43354575416897 17 18.238959820841714 24.132009621112445 37.57083490744238 20.05819565060345 18 18.168021288665347 23.68991689888476 38.13526402990077 20.00679778254912 19 18.2838441341887 25.853186845461767 35.931906114806736 19.9310629055428 20 18.681644684406432 26.84816193407572 36.17752634140738 18.29266704011047 21 19.22357243605762 26.375870003659436 36.91296588200044 17.487591678282506 22 17.995352874786978 22.49071226312866 37.77299195990493 21.740942902179437 23 17.461596673586826 24.1254960664051 37.23136027892225 21.181546981085823 24 18.71604809608796 23.24486346997192 36.47205744244682 21.567030991493297 25 18.98274855428693 25.718593119554523 34.276989506071224 21.02166882008733 26 17.810604777633163 24.043602919493647 35.73507833437748 22.410713968495713 27 18.625983398725477 23.10061784027106 36.56810276731333 21.70529599369014 28 16.882482445970066 22.289561850939076 37.62922004327368 23.19873565981717 29 17.938684948833068 21.185573542177636 38.069595555623984 22.806145953365316 30 18.52614836930197 21.79980175108036 37.57515753920272 22.09889234041495 31 17.59838132244109 22.053652742265744 37.28340950244732 23.064556432845844 32 17.84950846347613 22.948615159055088 37.079002312904066 22.122874064564723 33 17.454194906873933 23.20791385054116 34.81891725772241 24.518973984862498 34 16.01831137870636 23.41279475315404 35.95091385172544 24.61798001641416 35 15.522570651343628 23.462416197197278 33.744713658213655 27.270299493245442 36 16.51588774421389 23.84559085639033 32.72978340654174 26.908737992854036 37 15.800936293882115 23.79679841021894 34.09727461028218 26.30499068561677 38 16.698740989089202 24.15717562793628 33.619179694762984 25.52490368821153 39 17.97977955762305 23.55567845777973 32.5577663481341 25.906775636463113 40 18.847740329443756 23.340612724169908 32.79379388507484 25.017853061311495 41 17.447681352166587 23.702055796293905 30.992085438889237 27.85817741265027 42 17.886517297040598 23.16563495907711 33.09519382562385 25.85265391825844 43 18.610350867427844 22.736569346264123 33.56049848826317 25.09258129804487 44 19.774382307764277 22.55880851688728 32.30107307853097 25.365736096817475 45 18.86289914767176 21.533456577683612 32.056104207401056 27.54754006724357 46 20.00093558331251 22.65763690603783 32.125325529700035 25.216101980949627 47 17.39723091025151 22.15271798795111 35.47613492769362 24.973916174103763 48 17.351695241433788 22.533938580731956 34.01917116792773 26.095195009906526 49 18.405292322413853 20.86445529510548 35.31548698295699 25.41476539952368 50 17.479242485430362 20.770304822517478 34.89761284141389 26.852839850638272 51 16.724380708982668 20.68870774627454 33.15873059108733 29.428180953655463 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 276.0 1 895.5 2 1515.0 3 29153.5 4 56792.0 5 37468.0 6 18144.0 7 17973.5 8 17803.0 9 17993.0 10 18183.0 11 18208.5 12 18234.0 13 17595.5 14 16957.0 15 16197.5 16 15438.0 17 14829.5 18 14221.0 19 13425.0 20 12629.0 21 12326.0 22 12023.0 23 11977.5 24 11932.0 25 12559.0 26 14081.0 27 14976.0 28 16439.5 29 17903.0 30 20259.0 31 22615.0 32 26132.5 33 29650.0 34 33646.5 35 37643.0 36 41365.5 37 45088.0 38 49657.5 39 54227.0 40 60238.5 41 66250.0 42 75626.5 43 85003.0 44 100894.0 45 116785.0 46 163696.5 47 210608.0 48 202329.0 49 194050.0 50 182041.0 51 170032.0 52 140120.0 53 110208.0 54 92747.0 55 75286.0 56 66001.0 57 56716.0 58 51380.5 59 46045.0 60 40453.5 61 34862.0 62 29839.0 63 24816.0 64 21292.0 65 17768.0 66 14950.5 67 12133.0 68 9609.5 69 7086.0 70 6038.5 71 4991.0 72 3949.0 73 2907.0 74 2326.5 75 1344.0 76 942.0 77 748.5 78 555.0 79 441.5 80 328.0 81 220.0 82 112.0 83 78.0 84 44.0 85 38.5 86 33.0 87 30.0 88 27.0 89 17.5 90 8.0 91 7.0 92 6.0 93 4.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1688786.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.91999996033642 #Duplication Level Percentage of deduplicated Percentage of total 1 76.47744763946436 32.82412049652441 2 9.522937881951133 8.174489870312577 3 3.55479864094402 4.577158725849639 4 1.9454123224837996 3.339883872153706 5 1.3683519807306603 2.9364833479343098 6 1.0663112819056582 2.745964810625828 7 0.8943491403066023 2.6869825546540396 8 0.7682091595133412 2.6377229676674143 9 0.666365660048721 2.574037269257459 >10 3.6118677475057726 23.325706366154037 >50 0.07662032414145103 2.2419257433214024 >100 0.04166112763949891 3.2841687213794275 >500 0.0015316468554119925 0.45517187130873643 >1k 0.002910129025282786 3.01824178616378 >5k 9.189881132471956E-4 2.742995595353601 >10k+ 3.063293710823985E-4 2.43494600133963 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26036 1.541699185095092 No Hit GAATCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTC 11004 0.6515923272694113 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGC 9159 0.542342250587108 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCG 8650 0.5122022565322072 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTT 7011 0.41515029139275195 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCT 5778 0.3421392645367738 No Hit CGTTCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTC 5653 0.33473749782388057 No Hit CGCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTG 5475 0.3241973820247207 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTGCT 4365 0.2584696936142294 TruSeq Adapter, Index 13 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTGC 4042 0.23934352842811343 TruSeq Adapter, Index 19 (95% over 22bp) GAATCAGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTC 3923 0.23229704651743913 No Hit GCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTGC 3691 0.21855936749830943 TruSeq Adapter, Index 19 (95% over 22bp) CGTCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCT 3161 0.18717587663564242 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTC 2949 0.1746224802905756 No Hit GAACTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCT 2920 0.17290527041318438 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCT 2747 0.16266122528254023 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTC 2527 0.14963411586784828 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCC 2311 0.13684386298796888 No Hit TCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGTCTTCTGC 2286 0.13536350964539023 TruSeq Adapter, Index 19 (95% over 22bp) CGTTTTTTCTGTCTCTTATACACATCTGACGCTCTTACCCTCGTATGCCGT 1933 0.11446092044817993 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7764240110943602E-4 0.0 0.0 0.275404935853329 0.0 2 1.7764240110943602E-4 0.0 0.0 0.9168124321257992 0.0 3 1.7764240110943602E-4 0.0 0.0 1.5235796601819296 0.0 4 1.7764240110943602E-4 0.0 0.0 2.3204834715588594 0.0 5 1.7764240110943602E-4 0.0 0.0 4.241449183022597 0.0 6 1.7764240110943602E-4 0.0 0.0 6.064237860806521 0.0 7 1.7764240110943602E-4 0.0 0.0 8.049273264937062 0.0 8 1.7764240110943602E-4 0.0 0.0 10.273770625763122 0.0 9 1.7764240110943602E-4 0.0 0.0 11.590337674518855 0.0 10 2.3685653481258134E-4 0.0 0.0 13.679589953966932 0.0 11 2.3685653481258134E-4 0.0 0.0 15.773460935843854 0.0 12 2.9607066851572667E-4 0.0 0.0 17.93951394670491 0.0 13 3.5528480221887204E-4 0.0 0.0 18.694908650355938 0.0 14 3.5528480221887204E-4 0.0 0.0 19.10893387320833 0.0 15 3.5528480221887204E-4 0.0 0.0 19.53557170653949 0.0 16 4.1449893592201736E-4 0.0 0.0 20.123212769409506 0.0 17 4.1449893592201736E-4 0.0 0.0 20.883759102692704 0.0 18 4.1449893592201736E-4 0.0 0.0 21.67095179614232 0.0 19 4.1449893592201736E-4 0.0 0.0 22.37417884800087 0.0 20 5.329272033283081E-4 0.0 0.0 23.02950166569358 0.0 21 5.329272033283081E-4 0.0 0.0 23.863355096501273 0.0 22 5.329272033283081E-4 0.0 0.0 24.81380115657046 0.0 23 5.329272033283081E-4 0.0 0.0 25.70337508719281 0.0 24 5.329272033283081E-4 0.0 0.0 26.40589156944693 0.0 25 5.329272033283081E-4 0.0 0.0 27.020238206617062 0.0 26 5.921413370314533E-4 0.0 0.0 27.56429766708156 0.0 27 5.921413370314533E-4 0.0 0.0 28.141339400018712 0.0 28 5.921413370314533E-4 0.0 0.0 28.699195753636044 0.0 29 5.921413370314533E-4 0.0 0.0 29.330299990644168 0.0 30 5.921413370314533E-4 0.0 0.0 30.024052781110218 0.0 31 5.921413370314533E-4 0.0 0.0 30.621523390174954 0.0 32 5.921413370314533E-4 0.0 0.0 31.19897962204803 0.0 33 5.921413370314533E-4 0.0 0.0 31.77158029495744 0.0 34 5.921413370314533E-4 0.0 0.0 32.3599911415656 0.0 35 6.513554707345987E-4 0.0 0.0 32.96752815335987 0.0 36 6.513554707345987E-4 0.0 0.0 33.53687204891561 0.0 37 6.513554707345987E-4 0.0 0.0 34.112847927446104 0.0 38 7.105696044377441E-4 0.0 0.0 34.72790513422068 0.0 39 7.105696044377441E-4 0.0 0.0 35.55850178767469 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGATA 20 7.034227E-4 45.000004 16 CGTTTAT 5935 0.0 44.620895 1 CGTTTTT 14935 0.0 44.081017 1 CGTTAGG 325 0.0 43.615387 2 CGTTATT 660 0.0 42.613636 1 GTTTATT 6180 0.0 42.123787 2 TAGGGAT 1195 0.0 41.046024 5 GCGTTAG 110 0.0 40.909092 1 GTTAGGG 1800 0.0 40.625 3 TTAGGGA 2705 0.0 40.591496 4 TACGCGG 50 1.0822987E-9 40.5 2 CGTAAGG 50 1.0822987E-9 40.5 2 CGTTTTC 710 0.0 40.246475 1 AGGGCGA 795 0.0 40.18868 6 TAGGGCG 700 0.0 40.17857 5 CTTAGGG 2630 0.0 40.03802 3 TCTTGCG 305 0.0 39.836063 1 CTAGGGA 1450 0.0 39.72414 4 TTCGTAG 295 0.0 39.66102 1 TCTTAGG 1535 0.0 39.576546 2 >>END_MODULE