##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934313.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1450691 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.40294521714135 33.0 31.0 34.0 31.0 34.0 2 32.574326993136374 34.0 31.0 34.0 31.0 34.0 3 32.63283704110662 34.0 31.0 34.0 31.0 34.0 4 36.07748652194024 37.0 35.0 37.0 35.0 37.0 5 35.1637143954157 37.0 35.0 37.0 35.0 37.0 6 25.951998047826862 37.0 0.0 37.0 0.0 37.0 7 31.037875054025978 37.0 19.0 37.0 17.0 37.0 8 34.759759314699 37.0 32.0 37.0 32.0 37.0 9 37.28277351965374 39.0 37.0 39.0 35.0 39.0 10 37.39598577505478 39.0 37.0 39.0 35.0 39.0 11 37.43818635395132 39.0 37.0 39.0 35.0 39.0 12 37.17945654863786 39.0 37.0 39.0 34.0 39.0 13 37.196080350674265 39.0 37.0 39.0 34.0 39.0 14 38.25445804792337 40.0 38.0 41.0 33.0 41.0 15 38.42791538652959 40.0 38.0 41.0 34.0 41.0 16 38.53896108819866 40.0 38.0 41.0 34.0 41.0 17 38.529040298726606 40.0 38.0 41.0 34.0 41.0 18 38.51272945099956 40.0 38.0 41.0 35.0 41.0 19 38.5081171662332 40.0 37.0 41.0 34.0 41.0 20 38.43970976589777 40.0 37.0 41.0 34.0 41.0 21 38.3375949805989 40.0 37.0 41.0 34.0 41.0 22 38.352655389741855 40.0 37.0 41.0 34.0 41.0 23 38.294705764356436 40.0 37.0 41.0 34.0 41.0 24 38.244974291561746 40.0 37.0 41.0 34.0 41.0 25 38.12858492952669 40.0 37.0 41.0 34.0 41.0 26 38.09232358924127 40.0 37.0 41.0 34.0 41.0 27 38.07583903119272 40.0 37.0 41.0 34.0 41.0 28 37.990675478099746 40.0 36.0 41.0 34.0 41.0 29 37.96690060116179 40.0 36.0 41.0 34.0 41.0 30 37.741014454491 40.0 36.0 41.0 33.0 41.0 31 37.74274190713253 40.0 36.0 41.0 33.0 41.0 32 37.69525763929052 40.0 36.0 41.0 33.0 41.0 33 37.61040359387354 40.0 36.0 41.0 33.0 41.0 34 37.52321755632316 40.0 36.0 41.0 33.0 41.0 35 37.49528121426272 40.0 36.0 41.0 33.0 41.0 36 37.412263535101545 40.0 35.0 41.0 33.0 41.0 37 37.347800461986736 40.0 35.0 41.0 33.0 41.0 38 37.24963827582855 40.0 35.0 41.0 33.0 41.0 39 37.21354788855793 39.0 35.0 41.0 33.0 41.0 40 37.12594342971729 39.0 35.0 41.0 32.0 41.0 41 37.05771525431673 39.0 35.0 41.0 32.0 41.0 42 37.01241822000688 39.0 35.0 41.0 32.0 41.0 43 36.92290708358982 39.0 35.0 41.0 32.0 41.0 44 36.788712413601516 39.0 35.0 41.0 31.0 41.0 45 36.74079731658913 39.0 35.0 41.0 32.0 41.0 46 36.67490802658871 39.0 35.0 41.0 31.0 41.0 47 36.608672694598646 39.0 35.0 41.0 31.0 41.0 48 36.55825740974473 39.0 35.0 41.0 31.0 41.0 49 36.52333060589746 39.0 35.0 40.0 31.0 41.0 50 36.43434956169163 39.0 35.0 40.0 31.0 41.0 51 35.441218012657416 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 19.0 10 31.0 11 28.0 12 13.0 13 14.0 14 28.0 15 44.0 16 75.0 17 151.0 18 250.0 19 485.0 20 799.0 21 1360.0 22 2079.0 23 3133.0 24 4680.0 25 7046.0 26 9045.0 27 10694.0 28 12485.0 29 14860.0 30 19231.0 31 25933.0 32 36966.0 33 61265.0 34 93040.0 35 114379.0 36 135692.0 37 228637.0 38 319790.0 39 348241.0 40 197.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.953631752040923 4.375845717661445 52.91250859073365 16.758013939563973 2 21.069890142008187 4.310359683764496 51.876174871147605 22.743575303079705 3 22.467293172701837 4.789303855886608 50.408460519848816 22.33494245156274 4 19.93291472822262 5.202210532773692 49.088468874488086 25.7764058645156 5 18.658694373922497 8.596041472649931 48.079501423804246 24.66576272962333 6 16.72340974059948 31.864814767583173 38.069168416981974 13.342607074835373 7 84.7192131198167 2.3823129805037735 8.75258755999727 4.145886339682262 8 85.86342646366457 2.684169130435082 7.206496766023915 4.245907639876445 9 80.49281342477481 4.702862291142635 9.471624212185779 5.332700071896772 10 41.42570678387058 24.90289110499755 17.43837936541965 16.233022745712216 11 30.6588377538704 25.062814893040624 24.754065476383325 19.52428187670565 12 27.243361956474537 22.84276941126677 29.339604367849525 20.574264264409166 13 25.737114244177427 22.771079437316423 31.362364555925414 20.12944176258073 14 21.892877256424697 24.336953906793383 32.84751887204098 20.92264996474094 15 20.132474799940166 23.68960722855522 34.46805694665508 21.709861024849538 16 23.990360455810368 23.90874417777459 30.81448771654336 21.286407649871684 17 23.995806136523907 23.63494362341808 28.945860972460707 23.4233892675973 18 25.160837145884273 22.366582545835055 30.78932729299348 21.6832530152872 19 24.897376491616754 24.780742418612924 28.427142651329607 21.894738438440715 20 25.817489734202525 26.98031489821058 27.879403677282067 19.32279169030483 21 25.568711738061378 25.929849981836245 29.29528066280138 19.206157617301 22 24.2358986165903 22.34486875564817 30.48760900839669 22.931623619364842 23 22.785210634104715 24.598208715708584 29.355872477322876 23.26070817286383 24 22.562971714858644 25.114652258820108 29.839710868820447 22.482665157500804 25 23.237546796664486 25.92867812649282 27.317602439113497 23.516172637729195 26 21.78596268950452 25.782885535238037 28.05063242275578 24.38051935250167 27 21.741501119121853 25.1988190455445 30.19816073857217 22.861519096761473 28 19.278123321920383 25.93350341320102 30.09710544836909 24.691267816509512 29 20.732120072434444 25.228391159799017 29.64835378450683 24.3911349832597 30 23.94893192278714 24.465926927236744 29.447552924778602 22.13758822519751 31 23.294485179821205 26.61469603106382 27.76773275632095 22.323086032794027 32 23.70380735801077 25.429123086859985 27.622974155075063 23.24409540005418 33 24.221767419802013 24.842712886479614 26.760281824316827 24.17523786940155 34 20.865780514251483 24.904683354346307 29.806485323201148 24.423050808201058 35 21.20189619981099 25.4170598700895 29.102958521146128 24.278085408953388 36 24.05267558701336 26.83383298028319 27.125418162792762 21.988073269910686 37 22.113875387660087 27.27755255943547 27.062000108913615 23.54657194399083 38 21.936098038796683 27.253426125894485 27.17525648122171 23.635219354087123 39 21.71737468558087 25.1991637088808 27.06613606894921 26.017325536589116 40 23.174680204123415 24.33895295414392 28.532402834235548 23.953964007497117 41 21.39332221679186 23.91060535979061 28.34690502663903 26.3491673967785 42 23.02619923884549 23.40270946741932 29.76581504951778 23.80527624421741 43 23.017169059434437 23.346184680266163 29.27087849859136 24.36576776170804 44 22.683948545899852 24.555470462007417 27.64337822458401 25.117202767508722 45 22.219135570566024 23.263603344888747 26.991688788308466 27.52557229623676 46 22.57758544031775 23.646662176852274 28.5674206292036 25.20833175362637 47 19.99329974474233 25.628062764572196 30.66511062659105 23.713526864094423 48 20.95277354033354 25.59525081495646 29.33967330051679 24.112302344193214 49 23.159652882660744 23.486393725472894 29.475401722351624 23.878551669514735 50 21.30033204865819 24.00676643061824 28.318297969726153 26.37460355099742 51 20.132681597941946 23.57083624286633 27.397495400467776 28.898986758723943 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 227.0 1 883.5 2 1540.0 3 4249.5 4 6959.0 5 4702.5 6 2446.0 7 2463.0 8 2480.0 9 2554.0 10 2628.0 11 2729.5 12 2831.0 13 2818.0 14 2805.0 15 2828.0 16 2851.0 17 2956.5 18 3062.0 19 3416.5 20 3771.0 21 4216.0 22 4661.0 23 5150.5 24 5640.0 25 6815.5 26 9672.5 27 11354.0 28 13302.5 29 15251.0 30 18622.5 31 21994.0 32 25026.0 33 28058.0 34 32851.0 35 37644.0 36 40342.5 37 43041.0 38 47801.0 39 52561.0 40 58970.0 41 65379.0 42 72593.5 43 79808.0 44 87914.5 45 96021.0 46 107978.5 47 119936.0 48 135134.0 49 150332.0 50 147897.0 51 145462.0 52 130960.5 53 116459.0 54 105674.0 55 94889.0 56 86501.5 57 78114.0 58 71760.5 59 65407.0 60 58510.0 61 51613.0 62 45757.5 63 39902.0 64 34353.5 65 28805.0 66 24219.0 67 19633.0 68 16766.0 69 13899.0 70 11725.5 71 9552.0 72 7996.5 73 6441.0 74 5320.5 75 3425.0 76 2650.0 77 2016.5 78 1383.0 79 1002.0 80 621.0 81 441.5 82 262.0 83 165.0 84 68.0 85 52.5 86 37.0 87 27.0 88 17.0 89 11.0 90 5.0 91 2.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1450691.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.882719875925286 #Duplication Level Percentage of deduplicated Percentage of total 1 71.02559824851585 22.644892529774403 2 11.078085907343072 7.063990194905095 3 4.192961251278674 4.010490270753814 4 2.1036032115985654 2.682743677019754 5 1.3740181070851958 2.1903717206323203 6 0.9735024165934926 1.8622742908071988 7 0.7687724699030549 1.7157390114369613 8 0.6832926553430065 1.742818265886259 9 0.6051515925779363 1.7364490837769169 >10 6.982665136037553 46.63886283909199 >50 0.16164859813655374 3.345284143422073 >100 0.04607023210900067 2.5332765260450163 >500 0.0032411214346425494 0.7491843091880999 >1k 0.0013890520434182356 1.083623137260147 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCTGC 2973 0.20493681976382289 TruSeq Adapter, Index 19 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2893 0.19942220638302713 No Hit CTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCTGCT 2809 0.19363186233319157 TruSeq Adapter, Index 13 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCTGC 2648 0.18253370290434007 TruSeq Adapter, Index 19 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTGACACTGTCGTATGCCGTCTTCTGC 2279 0.15709754868541956 TruSeq Adapter, Index 19 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.20355816641862395 0.0 2 0.0 0.0 0.0 0.7932771348274719 0.0 3 0.0 0.0 0.0 1.1360103564439292 0.0 4 0.0 0.0 0.0 1.5307188091743866 0.0 5 0.0 0.0 0.0 2.239967022611983 0.0 6 0.0 0.0 0.0 2.8067314128232685 0.0 7 0.0 0.0 0.0 3.4851667239956683 0.0 8 0.0 0.0 0.0 4.546523001797075 0.0 9 0.0 0.0 0.0 5.041459552723495 0.0 10 0.0 0.0 0.0 5.9717058973964825 0.0 11 0.0 0.0 0.0 7.6968148282439195 0.0 12 0.0 0.0 0.0 9.205406251227863 0.0 13 0.0 0.0 0.0 9.721367265668567 0.0 14 6.893266725994716E-5 0.0 0.0 9.911414629304241 0.0 15 6.893266725994716E-5 0.0 0.0 10.194107497737285 0.0 16 6.893266725994716E-5 0.0 0.0 10.806160650338356 0.0 17 6.893266725994716E-5 0.0 0.0 11.60805436857332 0.0 18 6.893266725994716E-5 0.0 0.0 12.485774020794228 0.0 19 6.893266725994716E-5 0.0 0.0 13.113405956196047 0.0 20 6.893266725994716E-5 0.0 0.0 13.778537262587278 0.0 21 6.893266725994716E-5 0.0 0.0 14.71574580665352 0.0 22 6.893266725994716E-5 0.0 0.0 15.697691651771466 0.0 23 6.893266725994716E-5 0.0 0.0 16.628558390449793 0.0 24 6.893266725994716E-5 0.0 0.0 17.363518488775348 0.0 25 6.893266725994716E-5 0.0 0.0 17.986118339467193 0.0 26 6.893266725994716E-5 0.0 0.0 18.53930299422827 0.0 27 6.893266725994716E-5 0.0 0.0 19.13432977801613 0.0 28 6.893266725994716E-5 0.0 0.0 19.70998648230395 0.0 29 6.893266725994716E-5 0.0 0.0 20.38855965881087 0.0 30 6.893266725994716E-5 0.0 0.0 21.172117287554688 0.0 31 6.893266725994716E-5 0.0 0.0 21.804367711662923 0.0 32 6.893266725994716E-5 0.0 0.0 22.405460570169662 0.0 33 6.893266725994716E-5 0.0 0.0 23.01193017672268 0.0 34 6.893266725994716E-5 0.0 0.0 23.6624477576548 0.0 35 6.893266725994716E-5 0.0 0.0 24.36783574172584 0.0 36 6.893266725994716E-5 0.0 0.0 24.972168435593797 0.0 37 6.893266725994716E-5 0.0 0.0 25.587668221557866 0.0 38 6.893266725994716E-5 0.0 0.0 26.262450101365488 0.0 39 6.893266725994716E-5 0.0 0.0 27.31946362112952 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACGA 20 7.033899E-4 45.0 8 TACGCGG 35 1.2122291E-7 45.0 2 TTTAGGG 5230 0.0 41.085083 3 TTAGGGT 1050 0.0 40.92857 4 CGTTAGG 435 0.0 40.862072 2 CTTAGGG 2575 0.0 40.36893 3 TTAGGGA 2685 0.0 40.307262 4 TAGGGTA 590 0.0 40.042374 5 TCGTTAG 180 0.0 40.0 1 TGTTTAG 715 0.0 39.65035 1 TTTTAGG 2975 0.0 39.630253 2 TAGGGTG 525 0.0 39.42857 5 AGGGCGA 1085 0.0 39.40092 6 TAGGGAT 1395 0.0 39.35484 5 TAGGGCG 870 0.0 39.310345 5 CTAGGGG 2520 0.0 39.19643 4 GTTTAGG 1005 0.0 39.179104 2 GCTAGGG 1680 0.0 39.107143 3 TTGCGAG 185 0.0 38.91892 1 CTAGGGT 555 0.0 38.91892 4 >>END_MODULE