##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934309.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1380748 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.35469035624169 33.0 31.0 34.0 31.0 34.0 2 32.55549383377706 34.0 31.0 34.0 31.0 34.0 3 32.51608693259016 34.0 31.0 34.0 31.0 34.0 4 36.05402506467509 37.0 35.0 37.0 35.0 37.0 5 35.16475924643744 37.0 35.0 37.0 35.0 37.0 6 25.920488749576318 37.0 0.0 37.0 0.0 37.0 7 31.02260513866397 37.0 19.0 37.0 17.0 37.0 8 34.769580691045725 37.0 32.0 37.0 32.0 37.0 9 37.32878917803973 39.0 37.0 39.0 35.0 39.0 10 37.434064000092704 39.0 37.0 39.0 35.0 39.0 11 37.48268836891308 39.0 37.0 39.0 35.0 39.0 12 37.267828742102104 39.0 37.0 39.0 35.0 39.0 13 37.29856932619131 39.0 37.0 39.0 34.0 39.0 14 38.457123964691604 40.0 38.0 41.0 34.0 41.0 15 38.58313030328489 40.0 38.0 41.0 34.0 41.0 16 38.66607302708387 40.0 38.0 41.0 35.0 41.0 17 38.640367395064125 40.0 38.0 41.0 35.0 41.0 18 38.550157595737964 40.0 38.0 41.0 35.0 41.0 19 38.472871226320805 40.0 37.0 41.0 35.0 41.0 20 38.327086477764226 40.0 37.0 41.0 34.0 41.0 21 38.19996407744208 40.0 37.0 41.0 34.0 41.0 22 38.1811872984788 40.0 37.0 41.0 34.0 41.0 23 38.10496267240655 40.0 36.0 41.0 34.0 41.0 24 38.05870223965561 40.0 36.0 41.0 34.0 41.0 25 37.94514132919258 40.0 35.0 41.0 34.0 41.0 26 37.901315084287646 40.0 35.0 41.0 34.0 41.0 27 37.880078768899175 40.0 35.0 41.0 34.0 41.0 28 37.80031982664469 40.0 35.0 41.0 34.0 41.0 29 37.759482541347154 40.0 35.0 41.0 34.0 41.0 30 37.47208976583707 40.0 35.0 41.0 33.0 41.0 31 37.41016898087124 40.0 35.0 41.0 33.0 41.0 32 37.20724129240093 40.0 35.0 41.0 33.0 41.0 33 36.933631625756476 40.0 35.0 41.0 32.0 41.0 34 36.67780507377161 40.0 35.0 41.0 31.0 41.0 35 36.537943926045884 40.0 35.0 41.0 30.0 41.0 36 36.43538140196473 40.0 35.0 41.0 30.0 41.0 37 36.35768655830029 40.0 35.0 41.0 30.0 41.0 38 36.26534385709775 39.0 35.0 41.0 30.0 41.0 39 36.192737559641586 39.0 35.0 41.0 29.0 41.0 40 36.1105147354912 39.0 35.0 41.0 29.0 41.0 41 35.99206154924722 39.0 35.0 41.0 29.0 41.0 42 35.9560513576699 39.0 35.0 41.0 29.0 41.0 43 35.891177101107516 39.0 35.0 41.0 28.0 41.0 44 35.770518588475234 39.0 35.0 41.0 27.0 41.0 45 35.72384823298676 39.0 35.0 41.0 27.0 41.0 46 35.667404913858284 39.0 35.0 41.0 27.0 41.0 47 35.60731067508336 39.0 35.0 41.0 27.0 41.0 48 35.55528669967293 39.0 35.0 40.0 27.0 41.0 49 35.53702341049924 39.0 35.0 40.0 27.0 41.0 50 35.440966056079745 38.0 35.0 40.0 27.0 41.0 51 34.521582504555504 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 7.0 10 17.0 11 13.0 12 9.0 13 8.0 14 11.0 15 26.0 16 72.0 17 153.0 18 273.0 19 578.0 20 1040.0 21 1813.0 22 2994.0 23 5160.0 24 9145.0 25 14926.0 26 20218.0 27 20907.0 28 19659.0 29 19242.0 30 21009.0 31 25834.0 32 34610.0 33 54616.0 34 81099.0 35 104392.0 36 122850.0 37 203376.0 38 291055.0 39 325400.0 40 233.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.09563222253445 4.132180528235421 52.953978568138425 20.818208681091697 2 25.452435926034294 4.115378041467379 49.271481834483914 21.16070419801441 3 19.2244348715334 4.37856871782541 54.51610286598279 21.880893544658402 4 17.315831708610116 4.210616274656926 54.52624229765316 23.947309719079804 5 16.93965879363939 7.721901462106047 52.30027492344729 23.03816482080727 6 15.135346927897054 31.28963431415436 41.00038529840347 12.574633459545115 7 79.00420641565297 1.8237216349399021 14.733825433750402 4.438246515656731 8 80.65823741913803 2.160495615420048 12.922633239374601 4.25863372606732 9 75.68441163774997 3.96038958593458 15.103480142647319 5.251718633668128 10 38.251585372566176 24.039506122768238 22.708922989567974 14.999985515097613 11 27.088650499584283 23.343651412133134 30.47210642347481 19.09559166480777 12 24.46710044121013 20.744118405386068 34.27663845973342 20.512142693670388 13 23.03816482080727 20.942778841613386 36.47522936842928 19.543826969150054 14 19.38014757218551 22.94567871907111 37.054625463879 20.619548244864376 15 18.038048941588183 23.689116334045025 38.189300292305326 20.083534432061462 16 21.604304333593095 23.65840834098619 34.48456923348793 20.252718091932778 17 21.60589767285558 24.273220022770268 33.169412521329015 20.95146978304513 18 21.974176316025805 23.266881429486048 34.42938175539635 20.329560499091798 19 21.897985729474172 25.46098201844218 32.335299417417225 20.305732834666426 20 22.22802423034471 26.830239841013707 32.037779522403795 18.90395640623778 21 22.306749674813943 26.18276470434866 33.30651212241481 18.20397349842259 22 21.75646823316058 22.391196655725736 33.99201012784375 21.860324983269937 23 20.532421557011126 24.01821331626046 33.23988157143809 22.209483555290323 24 20.355198776315447 23.899002569621683 34.033726646716126 21.71207200734674 25 21.214153487819644 25.166359103906 31.479241686390274 22.14024572188408 26 19.687372351797723 25.70374898243561 32.03770709789187 22.571171567874803 27 19.68744477630965 24.195798219515797 33.68500262176733 22.431754382407217 28 18.35056071057137 24.253448131013045 33.88301123738727 23.51297992102831 29 19.6801299006046 22.76548653338625 33.81565644129124 23.738727124717908 30 21.08494815853436 22.844646524927068 33.51060439703697 22.559800919501605 31 20.734630794323078 24.14633227786678 32.19704102414054 22.921995903669607 32 21.38007804465406 24.02994608719332 31.70310585276966 22.886870015382964 33 21.447432840750086 23.32836984011565 30.977774365778547 24.24642295335572 34 19.403613114051225 23.880679168103086 32.62463534258242 24.091072375263263 35 19.15056186936356 24.806554128631728 31.322659891594988 24.72022411040972 36 20.09954024919826 25.287380463343055 30.418512284645715 24.194567002812967 37 19.82280618910909 25.567590900004927 31.306219527386602 23.30338338349938 38 20.712903440743712 25.235814210848034 30.57197982542796 23.479302522980298 39 20.61143669952808 24.18500696723805 30.50926019809552 24.694296135138348 40 21.512759750512043 24.23534200303024 30.290465747551327 23.96143249890639 41 18.768522568926407 24.59196029977954 30.414963483561085 26.224553647732968 42 19.681795664379017 23.90284106875404 31.72657139463537 24.688791872231572 43 19.993583188242894 23.01057108176148 33.000011587921904 23.995834142073715 44 21.226031107776365 23.272530541416682 30.448930579656825 25.05250777115013 45 20.92322422339196 22.800322723625165 29.768285016527273 26.508168036455604 46 20.82545113228482 23.371534849226652 30.17328288724662 25.629731131241908 47 18.614475632048716 23.955855811487687 32.89948636536138 24.530182191102217 48 18.94523837803857 23.80912375031505 32.56589906340621 24.67973880824017 49 20.96131951666778 22.180658599541697 32.259398528913316 24.598623354877212 50 19.708954856353223 22.429074675465763 31.381251321747346 26.480719146433675 51 18.728906360900034 22.18152769368487 30.337179557746964 28.752386387668132 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 215.0 1 801.5 2 1388.0 3 15727.0 4 30066.0 5 19536.5 6 9007.0 7 8859.0 8 8711.0 9 8811.0 10 8911.0 11 8965.5 12 9020.0 13 8753.5 14 8487.0 15 8131.5 16 7776.0 17 7600.5 18 7425.0 19 7263.5 20 7102.0 21 7281.0 22 7460.0 23 7651.0 24 7842.0 25 8669.5 26 11172.0 27 12847.0 28 14188.0 29 15529.0 30 18313.0 31 21097.0 32 23849.0 33 26601.0 34 30244.0 35 33887.0 36 37310.0 37 40733.0 38 44397.0 39 48061.0 40 53303.0 41 58545.0 42 65058.0 43 71571.0 44 81677.0 45 91783.0 46 108773.5 47 125764.0 48 135760.0 49 145756.0 50 140927.5 51 136099.0 52 117970.0 53 99841.0 54 89384.0 55 78927.0 56 71498.0 57 64069.0 58 58589.0 59 53109.0 60 46680.0 61 40251.0 62 35286.5 63 30322.0 64 25861.0 65 21400.0 66 17931.0 67 14462.0 68 12591.5 69 10721.0 70 8660.0 71 6599.0 72 5514.0 73 4429.0 74 3376.5 75 1999.5 76 1675.0 77 1222.5 78 770.0 79 596.5 80 423.0 81 291.0 82 159.0 83 99.0 84 39.0 85 36.5 86 34.0 87 22.5 88 11.0 89 6.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1380748.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.756071700954806 #Duplication Level Percentage of deduplicated Percentage of total 1 76.05017932175457 30.23456381986146 2 9.466971294683072 7.527391791646024 3 3.3489647633499104 3.994250497671306 4 1.7856135311517756 2.839559182986604 5 1.1853744153677717 2.3562915124919264 6 0.9012476331790016 2.149803931498812 7 0.7461856504330182 2.0765787154587074 8 0.6643835529743838 2.1130624135187768 9 0.5763645282781636 2.06225905609023 >10 5.147669539438823 35.79272319883342 >50 0.08378314335840586 2.276278512448752 >100 0.03770596003302477 2.63791707922564 >500 0.0027783329990611664 0.7810000307143894 >1k 0.002381428284909571 1.6405024384932114 >5k 1.984523570757976E-4 0.4140507284765244 >10k+ 1.984523570757976E-4 1.1037670905843324 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13990 1.0132189219176853 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5248 0.38008383861501155 No Hit CTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGCT 2783 0.20155741670456884 No Hit CCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC 2450 0.17744005423147455 No Hit CGCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTG 2418 0.17512246984967567 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTT 1900 0.1376065726693068 No Hit GCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC 1837 0.1330438284176403 No Hit TCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC 1835 0.13289897939377787 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCT 1661 0.12029711431774662 No Hit CGTTCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTC 1607 0.11638619067346105 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.242451193121409E-5 0.0 0.0 0.2122038199584573 0.0 2 7.242451193121409E-5 0.0 0.0 0.691436815407301 0.0 3 7.242451193121409E-5 0.0 0.0 1.1203347750639507 0.0 4 7.242451193121409E-5 0.0 0.0 1.5924701683435356 0.0 5 7.242451193121409E-5 0.0 0.0 2.487709560325273 0.0 6 7.242451193121409E-5 0.0 0.0 3.4702929136960545 0.0 7 7.242451193121409E-5 0.0 0.0 4.534136569453659 0.0 8 7.242451193121409E-5 0.0 0.0 5.953729427817386 0.0 9 7.242451193121409E-5 0.0 0.0 6.745256918713625 0.0 10 7.242451193121409E-5 0.0 0.0 7.959091738680773 0.0 11 7.242451193121409E-5 0.0 0.0 9.752974474705015 0.0 12 7.242451193121409E-5 0.0 0.0 11.224423283611491 0.0 13 7.242451193121409E-5 0.0 0.0 11.79281085324766 0.0 14 7.242451193121409E-5 0.0 0.0 12.04282026843421 0.0 15 7.242451193121409E-5 0.0 0.0 12.328317694467056 0.0 16 7.242451193121409E-5 0.0 0.0 12.871573958463093 0.0 17 7.242451193121409E-5 0.0 0.0 13.643474406625973 0.0 18 1.4484902386242818E-4 0.0 0.0 14.441302830060229 0.0 19 1.4484902386242818E-4 0.0 0.0 15.039239600564331 0.0 20 2.172735357936423E-4 0.0 0.0 15.661945554148911 0.0 21 2.172735357936423E-4 0.0 0.0 16.563703152204457 0.0 22 2.172735357936423E-4 0.0 0.0 17.495299649175664 0.0 23 2.172735357936423E-4 0.0 0.0 18.485053029227636 2.8969804772485636E-4 24 2.172735357936423E-4 0.0 0.0 19.19582718932057 2.8969804772485636E-4 25 2.172735357936423E-4 0.0 0.0 19.85771480385994 2.8969804772485636E-4 26 2.172735357936423E-4 0.0 0.0 20.410603527942826 2.8969804772485636E-4 27 2.172735357936423E-4 0.0 0.0 20.981598380008517 2.8969804772485636E-4 28 2.172735357936423E-4 0.0 0.0 21.56106689997016 2.8969804772485636E-4 29 2.172735357936423E-4 0.0 0.0 22.214553271125506 2.8969804772485636E-4 30 2.172735357936423E-4 0.0 0.0 22.960960291088597 2.8969804772485636E-4 31 2.172735357936423E-4 0.0 0.0 23.612853322981458 2.8969804772485636E-4 32 2.8969804772485636E-4 0.0 0.0 24.222522864418416 2.8969804772485636E-4 33 2.8969804772485636E-4 0.0 0.0 24.819373267243552 2.8969804772485636E-4 34 2.8969804772485636E-4 0.0 0.0 25.41448548178234 2.8969804772485636E-4 35 2.8969804772485636E-4 0.0 0.0 26.07970462387054 2.8969804772485636E-4 36 2.8969804772485636E-4 0.0 0.0 26.67923473363713 2.8969804772485636E-4 37 2.8969804772485636E-4 0.0 0.0 27.296943395898456 2.8969804772485636E-4 38 2.8969804772485636E-4 0.0 0.0 27.95578918093671 2.8969804772485636E-4 39 3.621225596560705E-4 0.0 0.0 28.825897267278314 2.8969804772485636E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAACG 25 3.891214E-5 45.000004 11 CGAATCG 20 7.033781E-4 45.0 30 CGTAAGG 30 2.1658216E-6 44.999996 2 CGTTTAT 2870 0.0 43.82404 1 CGTTTTT 7065 0.0 43.535034 1 GCGTTAG 110 0.0 42.954544 1 AGGGCGA 615 0.0 41.707317 6 TGCGTAG 125 0.0 41.399998 1 CGTAGGG 605 0.0 40.90909 3 CTAGGGA 1565 0.0 40.83067 4 TAGGGCG 480 0.0 40.781246 5 TTAGGGA 2720 0.0 40.69853 4 GTTAGGG 1780 0.0 40.57584 3 TCGTAGG 405 0.0 40.555553 2 CTTAGGG 2325 0.0 40.54839 3 GTTTATT 3130 0.0 40.327473 2 TAGGGAC 1070 0.0 40.16355 5 CGTTAGG 415 0.0 40.120483 2 GTAGGGA 825 0.0 40.090908 4 TTTAGGG 5155 0.0 40.024246 3 >>END_MODULE