##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934308.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 708173 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.32240144710403 33.0 31.0 34.0 31.0 34.0 2 32.49250536239026 34.0 31.0 34.0 31.0 34.0 3 32.550664879909284 34.0 31.0 34.0 31.0 34.0 4 36.024621102470725 37.0 35.0 37.0 35.0 37.0 5 35.138245880596976 37.0 35.0 37.0 35.0 37.0 6 26.00835106675911 37.0 0.0 37.0 0.0 37.0 7 31.071509362825186 37.0 19.0 37.0 17.0 37.0 8 34.76910444199369 37.0 32.0 37.0 32.0 37.0 9 37.34002708377755 39.0 37.0 39.0 35.0 39.0 10 37.317560822002534 39.0 37.0 39.0 34.0 39.0 11 37.41961074483213 39.0 37.0 39.0 35.0 39.0 12 37.18604493534772 39.0 37.0 39.0 34.0 39.0 13 37.153852236670986 39.0 37.0 39.0 33.0 39.0 14 38.350996154894354 40.0 38.0 41.0 34.0 41.0 15 38.46824010517204 40.0 38.0 41.0 34.0 41.0 16 38.54390523219609 40.0 38.0 41.0 35.0 41.0 17 38.535989087412254 40.0 38.0 41.0 35.0 41.0 18 38.52126669613216 40.0 38.0 41.0 35.0 41.0 19 38.53582528562936 40.0 37.0 41.0 35.0 41.0 20 38.475313235607686 40.0 37.0 41.0 34.0 41.0 21 38.35325407774654 40.0 37.0 41.0 34.0 41.0 22 38.365941655499434 40.0 37.0 41.0 34.0 41.0 23 38.29326591101327 40.0 37.0 41.0 34.0 41.0 24 38.24175025029195 40.0 37.0 41.0 34.0 41.0 25 38.113172911138946 40.0 37.0 41.0 34.0 41.0 26 38.079544122693186 40.0 37.0 41.0 34.0 41.0 27 38.05741534907431 40.0 37.0 41.0 34.0 41.0 28 38.003623408404444 40.0 36.0 41.0 34.0 41.0 29 38.00436334059616 40.0 36.0 41.0 34.0 41.0 30 37.75620222742183 40.0 36.0 41.0 33.0 41.0 31 37.76506164454166 40.0 36.0 41.0 33.0 41.0 32 37.64259580639194 40.0 36.0 41.0 33.0 41.0 33 37.56562167718905 40.0 36.0 41.0 33.0 41.0 34 37.51512695344217 40.0 36.0 41.0 33.0 41.0 35 37.48168456012867 40.0 36.0 41.0 33.0 41.0 36 37.41333544204594 40.0 36.0 41.0 33.0 41.0 37 37.371124005010074 40.0 35.0 41.0 33.0 41.0 38 37.25791437967841 40.0 35.0 41.0 33.0 41.0 39 37.2433473176752 39.0 35.0 41.0 33.0 41.0 40 37.15876911432658 39.0 35.0 41.0 32.0 41.0 41 37.07405676296611 39.0 35.0 41.0 32.0 41.0 42 37.02463098706107 39.0 35.0 41.0 32.0 41.0 43 37.005820611630206 39.0 35.0 41.0 32.0 41.0 44 36.90873557732362 39.0 35.0 41.0 32.0 41.0 45 36.873214595868525 39.0 35.0 41.0 31.0 41.0 46 36.77500695451535 39.0 35.0 41.0 31.0 41.0 47 36.70797531111748 39.0 35.0 41.0 31.0 41.0 48 36.68717813302682 39.0 35.0 41.0 31.0 41.0 49 36.70167035456026 39.0 35.0 40.0 31.0 41.0 50 36.60416310703741 39.0 35.0 40.0 31.0 41.0 51 35.62604759006627 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 4.0 11 7.0 12 7.0 13 5.0 14 4.0 15 9.0 16 15.0 17 31.0 18 86.0 19 153.0 20 281.0 21 496.0 22 788.0 23 1277.0 24 2050.0 25 3160.0 26 4239.0 27 5184.0 28 6131.0 29 7275.0 30 9414.0 31 12791.0 32 17692.0 33 29167.0 34 44252.0 35 61278.0 36 65514.0 37 111256.0 38 159638.0 39 165834.0 40 131.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.893879038031667 4.169885042214261 54.31681241730482 17.619423502449262 2 19.777229575259152 4.356138966043608 54.4402285882122 21.426402870485038 3 19.980004885811802 4.060730923093651 54.00657748883394 21.952686702260607 4 18.945935527053418 4.469105712869595 52.92873351568049 23.6562252443965 5 17.164449929607596 7.83438510081576 51.98306063631344 23.0181043332632 6 14.681299625938859 31.188000672152143 40.8867607208973 13.243938981011702 7 83.11147134951487 1.6473375855899617 10.457049336814592 4.784141728080568 8 85.43081987028593 1.8591502358886882 7.597578557781786 5.112451336043594 9 81.14147249330318 3.3486167927893327 10.174208844449026 5.335701869458451 10 36.24876972152285 26.13499808662573 19.682619924792387 17.933612267059036 11 27.61232071824258 27.26593643078739 26.007063245845295 19.11467960512474 12 26.4161440777889 22.12114836346486 31.65723629678059 19.80547126196565 13 21.68453188698242 26.405129819973368 31.71004825092174 20.200290042122475 14 18.431936828995173 27.614580053179093 31.499788893391866 22.45369422443386 15 16.232897893593798 26.31150862854133 36.375857311702084 21.07973616616279 16 18.018760952479127 24.82161844634009 33.545193053109905 23.614427548070882 17 17.948721569447013 24.480458870925606 30.576003321222355 26.994816238405022 18 19.62811346944885 24.08281592209813 33.61946868914799 22.66960191930503 19 21.436569877699377 26.21266272506859 29.81884370062118 22.531923696610857 20 23.676418050391643 25.29579636614217 30.51584852853752 20.51193705492867 21 22.206861882619076 27.428749754650344 29.802887147632006 20.56150121509857 22 21.261471420119097 25.0520706098651 28.54825021569588 25.138207754319918 23 19.913636922051534 26.63544077506485 28.974134851229856 24.476787451653763 24 21.59782990879347 23.524336567477157 31.40164903208679 23.47618449164258 25 19.082625290712862 26.62230839074633 28.432318091765712 25.862748226775096 26 18.220830220864112 28.02577901162569 28.374422634017392 25.37896813349281 27 18.26460483525918 27.357580704149974 29.79413222475299 24.583682235837852 28 16.446546253528446 26.480111498179117 32.298040168151005 24.775302080141433 29 18.47712352772557 24.51971481544764 30.786121470318694 26.2170401865081 30 20.830926906278552 26.949770748108158 28.55022713376534 23.669075211847954 31 21.58963981964859 28.98500790061186 25.942672200154483 23.482680079585073 32 21.836895786763968 27.543975836412855 27.33301043671532 23.286117940107857 33 21.076629580625074 26.648714367816908 28.276988814879978 23.997667236678044 34 19.899939703998882 25.75641827632513 29.096703771536053 25.246938248139934 35 19.015692493218463 24.057398404062283 28.63664669508722 28.29026240763203 36 19.39441351195259 26.02683242653984 29.275332439954642 25.303421621552925 37 20.061482151960046 27.481138083490897 29.930680779978903 22.526698984570153 38 19.987065307488425 28.12744908376908 29.228451240021858 22.657034368720637 39 21.340548142897287 26.29823503578928 30.209426227772028 22.15179059354141 40 22.877743150331913 24.397287103574975 30.619213101883297 22.10575664420982 41 19.186554697792772 23.984534852359523 30.218463567518107 26.6104468823296 42 19.361088321638924 23.79291500805594 30.300082042099884 26.545914628205253 43 20.992751771106775 23.740244262348327 30.097306731547235 25.169697234997663 44 20.65130977882523 24.468314945641815 27.893607917839287 26.98676735769367 45 21.059825777034707 24.597379453890504 26.3887496416836 27.954045127391186 46 21.589074985914458 25.18099390968026 28.624785186670486 24.60514591773479 47 18.616072626321532 24.960143919635456 31.55937885234258 24.864404601700432 48 18.99098101735028 22.963174252619066 31.94756083612338 26.098283893907283 49 20.406736771946967 22.503540801470827 32.42117392219133 24.668548504390877 50 20.535942488629193 22.71634191080428 30.084174347228714 26.663541253337815 51 18.841300077805847 22.897935956327057 28.451804855593192 29.808959110273904 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 82.0 1 318.5 2 555.0 3 2388.0 4 4221.0 5 2792.0 6 1363.0 7 1418.0 8 1473.0 9 1535.5 10 1598.0 11 1673.0 12 1748.0 13 1728.5 14 1709.0 15 1664.0 16 1619.0 17 1623.0 18 1627.0 19 1543.0 20 1459.0 21 1591.0 22 1723.0 23 2044.0 24 2365.0 25 3039.5 26 5189.5 27 6665.0 28 6804.0 29 6943.0 30 9703.0 31 12463.0 32 13977.5 33 15492.0 34 18210.5 35 20929.0 36 22150.0 37 23371.0 38 25649.5 39 27928.0 40 32263.0 41 36598.0 42 42573.0 43 48548.0 44 53179.5 45 57811.0 46 64694.0 47 71577.0 48 80652.0 49 89727.0 50 83712.5 51 77698.0 52 64649.5 53 51601.0 54 44091.0 55 36581.0 56 32148.0 57 27715.0 58 24984.5 59 22254.0 60 19507.0 61 16760.0 62 14300.0 63 11840.0 64 10161.5 65 8483.0 66 6689.0 67 4895.0 68 3797.0 69 2699.0 70 2279.0 71 1859.0 72 1489.0 73 1119.0 74 938.5 75 504.0 76 250.0 77 197.5 78 145.0 79 121.0 80 97.0 81 80.5 82 64.0 83 52.0 84 40.0 85 22.5 86 5.0 87 3.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 708173.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.17503793281592 #Duplication Level Percentage of deduplicated Percentage of total 1 69.94292512597059 23.203591941861777 2 12.382511420414472 8.215805721515528 3 4.622225521540437 4.600275210334013 4 2.317717253576451 3.075614312197627 5 1.4905094486604349 2.472385374926523 6 1.0109651429904447 2.0123284180477596 7 0.7865405842109253 1.8265459601827645 8 0.6604060344004699 1.7527196193836894 9 0.547658429061535 1.6351730242508515 >10 6.015679404309693 42.009276847415144 >50 0.17086058676066912 3.7764548061488608 >100 0.04500931054368335 2.5445042117660512 >500 0.004806819572626378 1.1280074790195787 >1k 0.0021849179875574444 1.7473170729498753 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 3007 0.42461375963218023 TruSeq Adapter, Index 14 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGCT 2591 0.36587105128266684 TruSeq Adapter, Index 15 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 2407 0.3398886995126897 TruSeq Adapter, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 2118 0.2990794622218017 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1930 0.2725322767176947 No Hit TCCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTG 880 0.12426342150858617 TruSeq Adapter, Index 15 (95% over 21bp) TCTGTATCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 850 0.12002716850261165 TruSeq Adapter, Index 15 (95% over 22bp) GCTGTATCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 845 0.11932112633494922 TruSeq Adapter, Index 15 (95% over 22bp) CCTGTATCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 765 0.10802445165235049 TruSeq Adapter, Index 15 (95% over 22bp) CTGTCACTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGCT 741 0.10463544924757086 TruSeq Adapter, Index 15 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3931242789544363 0.0 2 0.0 0.0 0.0 1.5665663616093808 0.0 3 0.0 0.0 0.0 2.206946607679197 0.0 4 0.0 0.0 0.0 2.8940668452482656 0.0 5 0.0 0.0 0.0 3.967392148528679 0.0 6 0.0 0.0 0.0 4.667362353549203 0.0 7 0.0 0.0 0.0 5.5099530764375375 0.0 8 0.0 0.0 0.0 6.934322545479707 0.0 9 0.0 0.0 0.0 7.538977057865804 0.0 10 0.0 0.0 0.0 8.818043048803046 0.0 11 0.0 0.0 0.0 11.03896929140196 0.0 12 0.0 0.0 0.0 12.94824852119468 0.0 13 0.0 0.0 0.0 13.596112814241717 0.0 14 0.0 0.0 0.0 13.799311750094963 0.0 15 0.0 0.0 0.0 14.12380873035261 0.0 16 0.0 0.0 0.0 14.956656071327204 0.0 17 0.0 0.0 0.0 16.1329223226528 0.0 18 0.0 0.0 0.0 17.51139905079691 0.0 19 0.0 0.0 0.0 18.330690382152383 0.0 20 0.0 0.0 0.0 19.1814711941856 0.0 21 0.0 0.0 0.0 20.43766141889058 0.0 22 0.0 0.0 0.0 21.68396705324829 0.0 23 0.0 0.0 0.0 22.946229240595166 0.0 24 0.0 0.0 0.0 23.854623093509637 0.0 25 0.0 0.0 0.0 24.69664898266384 0.0 26 0.0 0.0 0.0 25.40367960936099 0.0 27 0.0 0.0 0.0 26.06933616503312 0.0 28 0.0 0.0 0.0 26.765352533914736 0.0 29 0.0 0.0 0.0 27.55569613639605 0.0 30 0.0 0.0 0.0 28.415937913475943 0.0 31 0.0 0.0 0.0 29.202186471384817 0.0 32 0.0 0.0 0.0 29.908228639047238 0.0 33 0.0 0.0 0.0 30.615824099478516 0.0 34 0.0 0.0 0.0 31.30435642138291 0.0 35 0.0 0.0 0.0 32.06179845885116 0.0 36 0.0 0.0 0.0 32.75993295423576 0.0 37 0.0 0.0 0.0 33.473882794176 0.0 38 0.0 0.0 0.0 34.13840968237987 0.0 39 0.0 0.0 0.0 34.88102483432721 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCGT 35 1.2110468E-7 45.000004 25 GAACGTT 35 1.2110468E-7 45.000004 9 GCGATAG 35 1.2110468E-7 45.000004 9 CTATGCG 20 7.03145E-4 45.0 10 TCGCATC 20 7.03145E-4 45.0 31 TCCGATA 50 2.1827873E-11 45.0 14 CCGATAA 50 2.1827873E-11 45.0 15 GACGTGA 20 7.03145E-4 45.0 9 ATTCGAT 20 7.03145E-4 45.0 41 CGACATT 20 7.03145E-4 45.0 39 CACGACC 25 3.889283E-5 45.0 27 GACTTCG 20 7.03145E-4 45.0 9 TGCGATT 20 7.03145E-4 45.0 45 CGAGGGT 90 0.0 45.0 4 ATCCCGC 20 7.03145E-4 45.0 15 GTCCGCC 20 7.03145E-4 45.0 9 CGCAGTT 20 7.03145E-4 45.0 11 GAACGGT 25 3.889283E-5 45.0 12 CCGACAA 20 7.03145E-4 45.0 24 GCGGATA 20 7.03145E-4 45.0 13 >>END_MODULE