##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934306.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1468847 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.17412160694749 33.0 31.0 34.0 30.0 34.0 2 32.34204992078821 34.0 31.0 34.0 30.0 34.0 3 32.31922930026068 34.0 31.0 34.0 30.0 34.0 4 35.94232891512867 37.0 35.0 37.0 35.0 37.0 5 35.09457826444824 37.0 35.0 37.0 35.0 37.0 6 26.161604986768534 35.0 0.0 37.0 0.0 37.0 7 31.11061533297886 37.0 19.0 37.0 17.0 37.0 8 34.53838418841445 37.0 32.0 37.0 32.0 37.0 9 37.14705207553952 39.0 37.0 39.0 34.0 39.0 10 37.27889766599244 39.0 37.0 39.0 34.0 39.0 11 37.32356058867942 39.0 37.0 39.0 34.0 39.0 12 37.12083763659523 39.0 37.0 39.0 34.0 39.0 13 37.10036511631232 39.0 37.0 39.0 33.0 39.0 14 38.16630391048217 40.0 38.0 41.0 33.0 41.0 15 38.25895208963221 40.0 38.0 41.0 33.0 41.0 16 38.4326631705004 40.0 38.0 41.0 34.0 41.0 17 38.37678941373744 40.0 38.0 41.0 34.0 41.0 18 38.28241743353801 40.0 37.0 41.0 34.0 41.0 19 38.21854352427448 40.0 37.0 41.0 34.0 41.0 20 38.00243115858902 40.0 36.0 41.0 34.0 41.0 21 37.949096127779136 40.0 36.0 41.0 34.0 41.0 22 37.96932151544715 40.0 36.0 41.0 34.0 41.0 23 37.87384594855693 40.0 35.0 41.0 34.0 41.0 24 37.790110202083675 39.0 35.0 41.0 33.0 41.0 25 37.68835828374228 39.0 35.0 41.0 33.0 41.0 26 37.65419339114285 39.0 35.0 41.0 33.0 41.0 27 37.58005360667244 39.0 35.0 41.0 33.0 41.0 28 37.515533612418444 39.0 35.0 41.0 33.0 41.0 29 37.44958392535097 39.0 35.0 41.0 33.0 41.0 30 37.11951346872751 39.0 35.0 41.0 32.0 41.0 31 37.042738964643696 39.0 35.0 41.0 32.0 41.0 32 36.76324831653671 39.0 35.0 41.0 31.0 41.0 33 36.51272869127962 39.0 35.0 41.0 30.0 41.0 34 36.22592141999814 39.0 35.0 41.0 30.0 41.0 35 35.90936836852307 39.0 35.0 41.0 29.0 41.0 36 35.83676175939359 39.0 35.0 41.0 28.0 41.0 37 35.68995681646897 39.0 35.0 41.0 27.0 41.0 38 35.608822430110145 39.0 35.0 40.0 26.0 41.0 39 35.62072564399151 39.0 35.0 41.0 26.0 41.0 40 35.44223530428969 39.0 35.0 40.0 25.0 41.0 41 35.25691852180656 38.0 35.0 40.0 24.0 41.0 42 35.12784857783009 38.0 35.0 40.0 23.0 41.0 43 35.22739808843263 38.0 35.0 40.0 24.0 41.0 44 35.203556939558716 38.0 35.0 40.0 24.0 41.0 45 35.17214863086489 38.0 35.0 40.0 24.0 41.0 46 35.08158916483473 38.0 34.0 40.0 23.0 41.0 47 34.939866439458974 38.0 34.0 40.0 23.0 41.0 48 34.891302497809505 38.0 34.0 40.0 23.0 41.0 49 34.85878719839439 38.0 34.0 40.0 24.0 41.0 50 34.76566245497319 38.0 34.0 40.0 23.0 41.0 51 33.759403804480655 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 15.0 11 13.0 12 7.0 13 13.0 14 10.0 15 29.0 16 63.0 17 157.0 18 405.0 19 841.0 20 1598.0 21 2884.0 22 4672.0 23 7147.0 24 11939.0 25 18658.0 26 23977.0 27 24662.0 28 23328.0 29 23307.0 30 26922.0 31 33831.0 32 45363.0 33 66268.0 34 94256.0 35 113531.0 36 139834.0 37 221485.0 38 296855.0 39 286625.0 40 145.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.4025817528987 3.743276188738514 49.12717253737115 19.726969520991634 2 24.764390028369192 10.962339848874661 45.29886366653572 18.974406456220425 3 17.393710849394118 10.84408382901691 51.528307577303835 20.23389774428514 4 16.480954108903106 3.837976317478948 57.8347506581693 21.84631891544865 5 20.66525649029477 7.142541054309945 49.74554871950584 22.446653735889445 6 14.169072748897605 33.63331919525995 40.28111845549604 11.916489600346395 7 73.69474152175141 1.583486911843099 20.101276715682438 4.62049485072305 8 74.02357086885155 6.16333763829725 14.896173665466858 4.916917827384336 9 69.62433800116689 3.5371281011568936 16.058309680994682 10.78022421668152 10 38.2294411875437 21.537437187127047 24.760849836640574 15.47227178868868 11 27.906650590565253 21.85802878039714 30.807905792774875 19.42741483626273 12 23.765987880289778 18.9353962665955 35.24376602872866 22.054849824386068 13 22.95814336006405 20.186037075338685 39.10638752708757 17.749432037509692 14 19.45430667727816 24.076095059594362 36.31855462141394 20.151043641713535 15 15.991999166693333 22.830083732342445 41.69134021446754 19.486576886496685 16 19.621989220116188 23.766396363950772 33.75205177938887 22.859562636544172 17 20.028158140364518 24.070240127120115 34.59298347615511 21.308618256360262 18 19.847608362205186 23.32714026716193 35.41859703563407 21.406654334998812 19 19.905953445117156 26.097340294802656 32.15474450368214 21.841961756398046 20 19.85754813128937 27.49421825418168 34.91303042454388 17.735203189985068 21 20.341873592007882 27.459973707268354 34.3651857545408 17.83296694618296 22 19.236516805358217 21.8113254818235 35.57348042376095 23.378677289057332 23 18.462440267774653 25.605253644525263 34.50223202280428 21.4300740648958 24 19.737181612516483 24.306071360733963 32.710758846905094 23.245988179844463 25 19.582434385609936 28.527069191004916 29.96002987377174 21.930466549613403 26 19.0369044563525 23.96171963451605 32.86965899103174 24.13171691809971 27 20.3586895027188 24.557356892855417 33.33376451053105 21.750189093894733 28 17.976753194852833 23.237682345404252 35.574365471693106 23.211198988049812 29 22.868004632204716 21.774970435995037 32.74262057246261 22.61440435933763 30 22.480489799141775 23.37622638709137 34.931752592339436 19.211531221427418 31 23.13903354127421 22.359919038538393 33.36208604435996 21.138961375827435 32 25.817188583970964 23.85653509181011 31.292231253493384 19.03404507072554 33 25.002059438457515 21.262323441447613 31.358405606574408 22.377211513520468 34 25.833459849800555 21.75073373877606 32.06229103507717 20.35351537634621 35 22.7270777691618 22.46251651805804 33.33430915541237 21.476096557367786 36 25.217602650241993 22.434331145449455 33.405521473645656 18.942544730662895 37 22.28618773772898 23.10438051069989 35.900539674996786 18.708892076574347 38 23.35961471821095 22.684118904147265 33.27787032958504 20.67839604805674 39 26.91403529434992 21.560039949702045 30.710959003898974 20.814965752049055 40 25.51994863998769 21.316107123478485 33.17806415508218 19.985880081451644 41 22.51854686022438 22.53236722408801 32.492764733154644 22.456321182532964 42 20.339899254313075 21.761626636402568 36.831814341452855 21.066659767831503 43 21.825554329348122 21.802066518840967 34.33019232091566 22.042186830895254 44 22.675813069707058 21.48310886021485 31.835242200174697 24.0058358699034 45 22.15499640193975 20.53106960765825 30.378861787510886 26.935072202891114 46 24.96189187845977 22.468711853583116 30.291786687109006 22.277609580848107 47 20.042591229719637 21.62151674068164 36.87518169012838 21.460710339470346 48 21.376494624695425 23.22849146303189 32.39248199438063 23.00253191789206 49 22.631356431268877 19.884508052914974 35.56381297711743 21.920322538698723 50 22.602217930117977 20.045791018397423 32.77305260520667 24.57893844627793 51 21.276552288972233 20.21367780306594 30.49419034113151 28.01557956683031 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 219.0 1 749.0 2 1279.0 3 15892.5 4 30506.0 5 20083.0 6 9660.0 7 9482.0 8 9304.0 9 9616.0 10 9928.0 11 9877.0 12 9826.0 13 9674.5 14 9523.0 15 9204.0 16 8885.0 17 8607.0 18 8329.0 19 8082.5 20 7836.0 21 7735.0 22 7634.0 23 7814.5 24 7995.0 25 8990.5 26 11157.5 27 12329.0 28 13516.5 29 14704.0 30 16977.0 31 19250.0 32 22417.0 33 25584.0 34 29153.5 35 32723.0 36 35935.0 37 39147.0 38 43956.5 39 48766.0 40 54816.5 41 60867.0 42 67848.0 43 74829.0 44 87274.0 45 99719.0 46 153790.5 47 207862.0 48 186553.0 49 165244.0 50 157126.5 51 149009.0 52 125947.0 53 102885.0 54 89273.0 55 75661.0 56 67303.5 57 58946.0 58 52588.0 59 46230.0 60 39378.5 61 32527.0 62 28175.5 63 23824.0 64 19962.0 65 16100.0 66 13568.5 67 11037.0 68 9673.0 69 8309.0 70 6639.0 71 4969.0 72 4151.0 73 3333.0 74 2718.5 75 1533.0 76 962.0 77 719.0 78 476.0 79 358.5 80 241.0 81 179.0 82 117.0 83 94.0 84 71.0 85 61.5 86 52.0 87 50.0 88 48.0 89 25.5 90 3.0 91 6.0 92 9.0 93 4.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1468847.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.96318186218444 #Duplication Level Percentage of deduplicated Percentage of total 1 76.46225294781942 30.55674920146056 2 10.128437192943435 8.095291550426227 3 3.5498230254299608 4.255866694314818 4 1.7978829260598537 2.8739648936418494 5 1.2124027124648307 2.422573504421887 6 0.8490548764747405 2.0358560663720757 7 0.7154346308107381 2.0013730983116016 8 0.5935723549449744 1.8976831975224884 9 0.4970889838484163 1.7878731716900453 >10 4.054108800293857 28.042886590817172 >50 0.09175955590338292 2.537889611771558 >100 0.0398106072404365 2.825512149494713 >500 0.003720615896011782 1.0721866419265111 >1k 0.003720615896011782 4.013377040477103 >5k 1.8603079480058915E-4 0.3969216808518682 >10k+ 7.441231792023566E-4 5.183994906499488 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGC 20222 1.3767260987699876 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCG 18542 1.2623506736916779 No Hit GAATCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTC 16204 1.1031782071243634 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14762 1.005005967265481 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5339 0.3634823776744617 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCT 4897 0.3333907479812397 No Hit GAATCAGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTC 4790 0.326106122693514 No Hit GCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTCTGC 4608 0.3137154516433638 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTC 4343 0.29567408994946376 No Hit GAACTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTCT 3737 0.25441724018907347 No Hit CTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTCTGCT 3671 0.24992391991813986 TruSeq Adapter, Index 21 (95% over 23bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTA 3409 0.2320868000547368 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTTGGGTTT 3381 0.23018054297009832 No Hit CCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTCTGC 3278 0.22316824012303527 No Hit CGCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTCTG 2789 0.18987682175202727 TruSeq Adapter, Index 21 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTCTGC 2129 0.14494361904269132 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTT 1876 0.1277192246707792 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCTTC 1829 0.12451943599299314 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTTGGGTTTCGTATGCCGTCT 1700 0.11573703728162293 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.4040305082830275E-4 0.0 0.0 0.2695992162560158 0.0 2 3.4040305082830275E-4 0.0 0.0 1.0210049106544112 0.0 3 3.4040305082830275E-4 0.0 0.0 1.4886506218823337 0.0 4 3.4040305082830275E-4 0.0 0.0 2.232227046111678 0.0 5 3.4040305082830275E-4 0.0 0.0 4.281725734538723 0.0 6 3.4040305082830275E-4 0.0 0.0 5.325333407768134 0.0 7 3.4040305082830275E-4 0.0 0.0 6.683745822403559 0.0 8 3.4040305082830275E-4 0.0 0.0 8.315501886854111 0.0 9 3.4040305082830275E-4 0.0 0.0 9.094548308979764 0.0 10 3.4040305082830275E-4 0.0 0.0 11.604544244567338 0.0 11 3.4040305082830275E-4 0.0 0.0 13.549403035169762 0.0 12 3.4040305082830275E-4 0.0 0.0 16.61834078021741 0.0 13 3.4040305082830275E-4 0.0 0.0 17.319366823093215 0.0 14 3.4040305082830275E-4 0.0 0.0 17.685232022123476 0.0 15 3.4040305082830275E-4 0.0 0.0 18.23757001239748 0.0 16 3.4040305082830275E-4 0.0 0.0 18.902036767614327 0.0 17 3.4040305082830275E-4 0.0 0.0 19.72628871488998 0.0 18 3.4040305082830275E-4 0.0 0.0 20.58948277118039 0.0 19 4.084836609939633E-4 0.0 0.0 21.537641428957542 0.0 20 4.084836609939633E-4 0.0 0.0 22.258955493662718 0.0 21 4.084836609939633E-4 0.0 0.0 23.243469197268332 0.0 22 4.7656427115962385E-4 0.0 0.0 24.337865005681326 0.0 23 4.7656427115962385E-4 0.0 0.0 25.389233868469624 0.0 24 4.7656427115962385E-4 0.0 0.0 26.172569369035713 0.0 25 4.7656427115962385E-4 0.0 0.0 26.875025104724998 0.0 26 4.7656427115962385E-4 0.0 0.0 27.47917243933507 0.0 27 4.7656427115962385E-4 0.0 0.0 28.133222861196572 0.0 28 4.7656427115962385E-4 0.0 0.0 28.768687276482847 0.0 29 4.7656427115962385E-4 0.0 0.0 29.468079384714677 0.0 30 4.7656427115962385E-4 0.0 0.0 30.28463822304161 0.0 31 4.7656427115962385E-4 0.0 0.0 30.968303710325173 0.0 32 4.7656427115962385E-4 0.0 0.0 31.612278201882155 0.0 33 4.7656427115962385E-4 0.0 0.0 32.24352161933816 0.0 34 4.7656427115962385E-4 0.0 0.0 32.91690693448671 0.0 35 5.446448813252844E-4 0.0 0.0 33.626102650582396 0.0 36 5.446448813252844E-4 0.0 0.0 34.282808216240355 0.0 37 6.127254914909449E-4 0.0 0.0 34.92412756400088 0.0 38 6.127254914909449E-4 0.0 0.0 35.63025965263911 0.0 39 6.127254914909449E-4 0.0 0.0 36.6800626613936 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTACGC 20 7.0339267E-4 45.000004 29 GCGATCG 25 3.891338E-5 45.0 9 CGTTTAT 3360 0.0 44.598213 1 CGTTTTT 7875 0.0 44.028572 1 TACGGCT 2550 0.0 42.17647 7 TAGGGAC 1085 0.0 41.8894 5 GTTTATT 3620 0.0 41.45718 2 CCGATGA 495 0.0 41.363636 18 TCGTTAG 185 0.0 41.351353 1 CGGGTCG 60 3.6379788E-12 41.250004 6 TTTAGGG 4635 0.0 41.019417 3 CGTTAGG 390 0.0 40.961536 2 TTAGGGA 2625 0.0 40.800003 4 GCGTTAG 155 0.0 40.64516 1 TAGGGCG 550 0.0 40.5 5 GTAGGGC 445 0.0 40.44944 4 AGGGCGA 730 0.0 40.376713 6 CCGTAGG 140 0.0 40.178574 2 TTAGGGT 1015 0.0 40.12315 4 GTTAGGG 1790 0.0 39.972065 3 >>END_MODULE