SRR2934303.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934303.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1268269
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6773	0.5340349720761132	No Hit
CTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGCT	5347	0.421598257152071	No Hit
TCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	4384	0.3456679931465643	No Hit
CCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	4321	0.34070059269760594	No Hit
GCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	3628	0.28605918775906375	No Hit
CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2464	0.19428055089259455	No Hit
CGCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG	2409	0.1899439314530277	No Hit
TCCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG	1852	0.1460258036741417	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGC	1634	0.12883702116822218	No Hit
TCTGTATCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	1581	0.12465809698100323	No Hit
GCTGTATCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	1564	0.12331768733604621	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCC	1534	0.12095225855082795	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCG	1474	0.1162214009803914	No Hit
CTGTCACTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGCT	1454	0.11464444845691252	No Hit
TTCCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCT	1332	0.10502503806369154	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGCAG	60	0.0	45.000004	1
ATTACGA	30	2.1656797E-6	45.000004	15
CCGCTAG	30	2.1656797E-6	45.000004	1
GAAGCGC	20	7.033564E-4	45.0	9
TTTCGAA	20	7.033564E-4	45.0	19
CCGTCAC	20	7.033564E-4	45.0	33
CCGAACC	20	7.033564E-4	45.0	35
ACTCCGC	20	7.033564E-4	45.0	41
GACGATA	20	7.033564E-4	45.0	9
CGTCACT	20	7.033564E-4	45.0	34
CGCCAGA	35	1.2120654E-7	45.0	16
CTTCGCG	55	1.8189894E-12	44.999996	1
CGTTTAT	1485	0.0	43.939396	1
CGTTTTT	3715	0.0	43.849262	1
TAGGGCG	480	0.0	43.593754	5
TGTTCCG	135	0.0	43.333332	1
TTAGGGA	3250	0.0	42.576923	4
AAGGGCG	75	0.0	42.0	5
TCGTTAG	115	0.0	41.086956	1
TAGGGAT	2010	0.0	41.08209	5