##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934300.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1438342 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19592767227822 33.0 31.0 34.0 30.0 34.0 2 32.32953358797838 34.0 31.0 34.0 30.0 34.0 3 32.407979465245404 34.0 31.0 34.0 30.0 34.0 4 35.94959196074369 37.0 35.0 37.0 35.0 37.0 5 35.018385752484456 37.0 35.0 37.0 35.0 37.0 6 25.776690800936077 35.0 0.0 37.0 0.0 37.0 7 30.902164436552642 36.0 19.0 37.0 17.0 37.0 8 34.458308246578355 37.0 32.0 37.0 32.0 37.0 9 37.085079209256214 39.0 37.0 39.0 34.0 39.0 10 37.207780903290036 39.0 37.0 39.0 34.0 39.0 11 37.280541762668406 39.0 37.0 39.0 34.0 39.0 12 36.96276198567517 39.0 35.0 39.0 33.0 39.0 13 36.887683179661025 39.0 35.0 39.0 33.0 39.0 14 37.74054014970014 40.0 37.0 41.0 33.0 41.0 15 37.87034933277343 40.0 37.0 41.0 33.0 41.0 16 38.12291165800623 40.0 37.0 41.0 33.0 41.0 17 38.07557034418796 40.0 37.0 41.0 33.0 41.0 18 38.0877969217335 40.0 37.0 41.0 33.0 41.0 19 38.10275372616527 40.0 37.0 41.0 34.0 41.0 20 37.958752508096126 40.0 36.0 41.0 33.0 41.0 21 37.93380781483124 40.0 36.0 41.0 33.0 41.0 22 38.016544048633776 40.0 36.0 41.0 34.0 41.0 23 37.95156298015354 40.0 36.0 41.0 34.0 41.0 24 37.88007302852868 40.0 36.0 41.0 34.0 41.0 25 37.77455431323009 39.0 36.0 41.0 33.0 41.0 26 37.75920886687589 40.0 36.0 41.0 33.0 41.0 27 37.72280792746093 40.0 36.0 41.0 33.0 41.0 28 37.62830467301935 39.0 35.0 41.0 33.0 41.0 29 37.62609796557425 40.0 36.0 41.0 33.0 41.0 30 37.40130094233499 39.0 35.0 41.0 33.0 41.0 31 37.372516411256846 39.0 35.0 41.0 32.0 41.0 32 37.315446534968736 39.0 35.0 41.0 33.0 41.0 33 37.25477459463744 39.0 35.0 41.0 32.0 41.0 34 37.15816127179767 39.0 35.0 41.0 32.0 41.0 35 37.15986740288471 39.0 35.0 41.0 32.0 41.0 36 37.05197094988535 39.0 35.0 41.0 32.0 41.0 37 36.993459830833004 39.0 35.0 41.0 31.0 41.0 38 36.8480702086152 39.0 35.0 41.0 31.0 41.0 39 36.88324334546304 39.0 35.0 41.0 31.0 41.0 40 36.83084134371381 39.0 35.0 41.0 31.0 41.0 41 36.66251767660265 39.0 35.0 41.0 31.0 41.0 42 36.679664502600914 39.0 35.0 41.0 31.0 41.0 43 36.62188617171716 39.0 35.0 40.0 31.0 41.0 44 36.554515546372144 39.0 35.0 40.0 31.0 41.0 45 36.5109153455854 39.0 35.0 40.0 31.0 41.0 46 36.45381001180526 39.0 35.0 40.0 31.0 41.0 47 36.27291770663722 38.0 35.0 40.0 31.0 41.0 48 36.25198735766598 38.0 35.0 40.0 31.0 41.0 49 36.286109979406845 38.0 35.0 40.0 31.0 41.0 50 36.174915284403845 38.0 35.0 40.0 31.0 41.0 51 35.16125719752326 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 10.0 11 10.0 12 7.0 13 9.0 14 19.0 15 30.0 16 71.0 17 112.0 18 247.0 19 567.0 20 1081.0 21 1741.0 22 2869.0 23 4117.0 24 5591.0 25 7689.0 26 10034.0 27 12007.0 28 14119.0 29 17637.0 30 23191.0 31 32159.0 32 46402.0 33 73397.0 34 104460.0 35 116977.0 36 139130.0 37 226434.0 38 302216.0 39 295843.0 40 158.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.77522591984382 3.9711000582615257 51.14207886580521 14.111595156089443 2 19.548062978067804 11.686719848269744 47.831739600178544 20.933477573483913 3 19.217682581750374 11.809500104981986 48.12979110670481 20.843026206562833 4 18.244826334766 4.142199838425076 54.221735859760756 23.39123796704817 5 22.505774009241193 7.59673290496975 46.01367407751425 23.883819008274806 6 15.168784614507539 35.135037425035215 36.99509574218093 12.701082218276321 7 78.39289960245894 1.8008234481090033 15.04225003510987 4.764026914322185 8 78.53466004608084 6.786981121318853 9.101451532389376 5.576907300210937 9 74.00423543218511 4.004124192994434 10.457040119804608 11.534600255015844 10 41.70739643283725 23.9564721046872 18.617755721518247 15.718375740957297 11 32.4958181016754 21.518248093985992 25.816530421832915 20.169403382505692 12 27.45925517018901 19.248064785704653 30.80672051570489 22.48595952840145 13 26.098104623239816 21.014751707173954 34.95149276041442 17.93565090917181 14 21.440519709498854 24.993708033277205 32.6544729973817 20.911299259842234 15 16.99366353760093 22.564522206818687 39.48219547228684 20.959618783293543 16 22.456620191859795 24.130491913606082 28.54550586717206 24.86738202736206 17 22.79054633738012 23.977120879457043 30.110154608570145 23.12217817459269 18 23.701247686572458 22.024316887082488 31.62551048359848 22.64892494274658 19 23.14852795788484 24.87621163812223 28.181614664662508 23.793645739330422 20 22.56980606837595 28.617741816619414 30.565470520919224 18.246981594085412 21 22.928482933822416 28.03074651230375 30.76604868661278 18.274721867261054 22 20.83642137961625 21.62489866804974 32.999870684440836 24.53880926789317 23 20.34835943051096 26.50962010425893 30.943405671252037 22.198614793978066 24 22.186726105474218 24.425275768906143 28.49711681922658 24.890881306393055 25 21.15442641597061 29.386265575224808 25.237460909853148 24.221847098951432 26 19.59909395679192 24.001941123877355 27.72914925657458 28.669815662756143 27 21.924618762436193 24.597001269517264 29.42978790857807 24.048592059468472 28 16.545230550175134 24.054014970014084 32.1153800695523 27.285374410258477 29 20.703281973272002 23.096593160736457 28.743303053098636 27.4568218128929 30 23.91322786931064 23.4774483398246 30.003504034506395 22.60581975635836 31 23.12370771346453 22.45230967322097 29.59045901461544 24.83352359869906 32 24.416098535675104 24.437512079880864 28.192460485753735 22.953928898690297 33 23.015040929069723 22.283087054400134 25.635766736979104 29.066105279551042 34 19.76581369382247 21.769301042450266 30.74783326913905 27.717051994588214 35 19.734180048973055 23.650077658859995 29.228027826483547 27.387714465683406 36 22.235601824878923 25.407170200133212 26.505865781573508 25.851362193414364 37 21.32643001455843 24.020017492362733 31.804397007109575 22.84915548596926 38 19.9246771630113 23.8617102191273 30.961134417266546 25.25247820059485 39 19.567321262954152 22.747997346945304 29.822045104710842 27.86263628538971 40 21.097972526700882 20.990070511741994 30.298705036771505 27.61325192478562 41 19.069178262193553 24.115196524887683 26.775412245488205 30.040212967430556 42 19.538746695848413 22.21766450538189 33.88199746652743 24.361591332242263 43 20.682633198502167 24.038441483318987 29.22295253840881 26.05597277977004 44 21.926356874790557 20.980476131545906 29.366451094385067 27.726715899278474 45 20.25373659393941 19.43612854244679 27.807572886003467 32.502561977610334 46 23.258932854634015 21.706242326233955 28.749351684091824 26.285473135040206 47 16.92170568613028 22.260978265252632 35.573736983276575 25.24357906534051 48 18.81610910339822 24.62036149955991 29.95900835823469 26.60452103880718 49 20.930279446751886 19.8525802625523 34.58725393543399 24.629886355261824 50 20.578624555217047 20.74840336999128 29.706843017863623 28.966129056928047 51 18.730176828598484 20.248313683393796 27.29781929471572 33.723690193292 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 179.0 1 678.5 2 1178.0 3 4471.0 4 7764.0 5 5013.5 6 2263.0 7 2262.5 8 2262.0 9 2458.5 10 2655.0 11 2738.5 12 2822.0 13 2774.5 14 2727.0 15 2746.0 16 2765.0 17 2704.5 18 2644.0 19 2919.0 20 3194.0 21 3103.5 22 3013.0 23 3608.5 24 4204.0 25 4937.0 26 6777.5 27 7885.0 28 9739.0 29 11593.0 30 14379.0 31 17165.0 32 20205.0 33 23245.0 34 26664.0 35 30083.0 36 32856.0 37 35629.0 38 39035.0 39 42441.0 40 48544.5 41 54648.0 42 62740.0 43 70832.0 44 82438.5 45 94045.0 46 151870.5 47 209696.0 48 191128.0 49 172560.0 50 166423.0 51 160286.0 52 138555.0 53 116824.0 54 103803.5 55 90783.0 56 81717.0 57 72651.0 58 65290.5 59 57930.0 60 49211.0 61 40492.0 62 35207.5 63 29923.0 64 25301.0 65 20679.0 66 17000.0 67 13321.0 68 10884.0 69 8447.0 70 7026.5 71 5606.0 72 4760.0 73 3914.0 74 3014.0 75 1735.0 76 1356.0 77 885.0 78 414.0 79 313.0 80 212.0 81 170.5 82 129.0 83 99.0 84 69.0 85 45.0 86 21.0 87 13.0 88 5.0 89 3.0 90 1.0 91 1.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1438342.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.73283785175184 #Duplication Level Percentage of deduplicated Percentage of total 1 70.97366317860025 23.23169408569972 2 11.948263219695471 7.822011251606844 3 4.501700623147596 4.420603096638614 4 2.3393025678419517 3.0628804655742923 5 1.4617847502928223 2.392418160274925 6 1.077370368942058 2.115923375571746 7 0.8365149456753564 1.9167055654150906 8 0.6884098335345668 1.8026885965310757 9 0.5708620991155032 1.6817342873452608 >10 5.3882364647067655 34.877149989078006 >50 0.13754715214165306 3.019110252183438 >100 0.06652265967424156 3.8172311876188707 >500 0.004018146803888933 0.9061365766783693 >1k 0.0042413771818827625 3.0947183640076585 >5k 8.929215119753184E-4 1.5571870482697143 >10k+ 6.696911339814888E-4 4.281807697506311 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGC 23356 1.6238140859406176 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCG 19731 1.3717877945579007 No Hit GAATCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTC 15512 1.0784639536355052 No Hit GCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCTGC 5828 0.4051887520492345 TruSeq Adapter, Index 13 (95% over 21bp) GAATCAGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTC 5347 0.3717474703512795 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTC 5086 0.3536015773717238 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCT 5050 0.3510986955814403 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGTTCCTAT 4231 0.2941581348524899 No Hit CTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCTGCT 4059 0.2821999218544685 TruSeq Adapter, Index 16 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCTGC 3868 0.2689207434671309 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGTTCCTATCGTA 3743 0.26023018169531303 No Hit GAACTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCT 3686 0.25626728552736416 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3561 0.2475767237555463 No Hit TCTGTCTCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCTGC 3337 0.23200323706044879 TruSeq Adapter, Index 13 (95% over 21bp) GCTGTATCTTATACACATCTGACGCCGTTCCTATCGTATGCCGTCTTCTGC 1957 0.13605943509957993 TruSeq Adapter, Index 16 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.952449417454263E-5 0.0 0.0 0.2958267227126789 0.0 2 6.952449417454263E-5 0.0 0.0 1.2754268456319846 0.0 3 6.952449417454263E-5 0.0 0.0 1.7486800774780964 0.0 4 6.952449417454263E-5 0.0 0.0 2.5368097434407115 0.0 5 6.952449417454263E-5 0.0 0.0 4.5601115729082515 0.0 6 6.952449417454263E-5 0.0 0.0 5.248125967259525 0.0 7 6.952449417454263E-5 0.0 0.0 6.412244097718067 0.0 8 6.952449417454263E-5 0.0 0.0 8.001226412077239 0.0 9 6.952449417454263E-5 0.0 0.0 8.58648360403854 0.0 10 6.952449417454263E-5 0.0 0.0 11.170222381047067 0.0 11 6.952449417454263E-5 0.0 0.0 13.399316713271253 0.0 12 6.952449417454263E-5 0.0 0.0 17.066038536036633 0.0 13 6.952449417454263E-5 0.0 0.0 17.801329586426593 0.0 14 6.952449417454263E-5 0.0 0.0 18.1159279225664 0.0 15 6.952449417454263E-5 0.0 0.0 18.71940053200143 0.0 16 6.952449417454263E-5 0.0 0.0 19.500299650569893 0.0 17 6.952449417454263E-5 0.0 0.0 20.496724701079437 0.0 18 6.952449417454263E-5 0.0 0.0 21.51790047151512 0.0 19 6.952449417454263E-5 0.0 0.0 22.668461325609627 0.0 20 6.952449417454263E-5 0.0 0.0 23.53953371312247 0.0 21 6.952449417454263E-5 0.0 0.0 24.708449033679056 0.0 22 1.3904898834908526E-4 0.0 0.0 26.024200085932275 0.0 23 1.3904898834908526E-4 0.0 0.0 27.189569657285958 0.0 24 1.3904898834908526E-4 0.0 0.0 28.030816036797923 0.0 25 1.3904898834908526E-4 0.0 0.0 28.81866760478384 0.0 26 1.3904898834908526E-4 0.0 0.0 29.48763228773129 0.0 27 1.3904898834908526E-4 0.0 0.0 30.250176939837676 0.0 28 1.3904898834908526E-4 0.0 0.0 30.949593351233574 0.0 29 1.3904898834908526E-4 0.0 0.0 31.766923304749497 0.0 30 1.3904898834908526E-4 0.0 0.0 32.789211467091974 0.0 31 2.085734825236279E-4 0.0 0.0 33.536669303962476 0.0 32 2.085734825236279E-4 0.0 0.0 34.26445170898159 0.0 33 2.085734825236279E-4 0.0 0.0 34.96644052666195 0.0 34 2.085734825236279E-4 0.0 0.0 35.76388647484395 0.0 35 2.085734825236279E-4 0.0 0.0 36.64357989963444 0.0 36 2.085734825236279E-4 0.0 0.0 37.34341345799539 0.0 37 2.085734825236279E-4 0.0 0.0 38.07196063245042 0.0 38 2.085734825236279E-4 0.0 0.0 38.92106327980411 0.0 39 2.085734825236279E-4 0.0 0.0 40.46979091203622 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCGTAT 20 7.0338795E-4 45.0 29 CCGTTTA 20 7.0338795E-4 45.0 20 AATCGCG 20 7.0338795E-4 45.0 41 CGCGTAA 25 3.891298E-5 44.999996 13 TAGGGAT 1395 0.0 42.258064 5 TACGGCT 2830 0.0 41.978798 7 TTAGGGA 2650 0.0 41.85849 4 CGTTTAT 700 0.0 41.785713 1 TATTGCG 65 0.0 41.53846 1 ATCCGGC 130 0.0 41.53846 6 TCGTTAG 185 0.0 41.351353 1 ACGGCTG 2895 0.0 41.11399 8 TAATACG 115 0.0 41.086956 4 TTTAGGG 5015 0.0 41.051846 3 TAGGGAG 1500 0.0 40.95 5 CGTTTTT 1625 0.0 40.70769 1 GCGCTAG 205 0.0 40.60976 1 CTAGGGA 1665 0.0 40.54054 4 CTTAGGG 2480 0.0 40.463707 3 GTTAGGG 1720 0.0 40.421513 3 >>END_MODULE