##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934297.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 742997 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.39351033718844 33.0 31.0 34.0 31.0 34.0 2 32.56608707706761 34.0 31.0 34.0 31.0 34.0 3 32.62448435188836 34.0 31.0 34.0 31.0 34.0 4 36.07873921429023 37.0 35.0 37.0 35.0 37.0 5 35.22316913796422 37.0 35.0 37.0 35.0 37.0 6 26.430848307597472 37.0 0.0 37.0 0.0 37.0 7 31.26855155538986 37.0 19.0 37.0 17.0 37.0 8 34.78433156526877 37.0 32.0 37.0 32.0 37.0 9 37.272137034200675 39.0 37.0 39.0 35.0 39.0 10 37.41450773017926 39.0 37.0 39.0 35.0 39.0 11 37.4916964671459 39.0 37.0 39.0 35.0 39.0 12 37.333227455830915 39.0 37.0 39.0 35.0 39.0 13 37.373725600507136 39.0 37.0 39.0 35.0 39.0 14 38.61067945092645 40.0 38.0 41.0 35.0 41.0 15 38.71140664094202 40.0 38.0 41.0 35.0 41.0 16 38.75685096978857 40.0 38.0 41.0 35.0 41.0 17 38.74197607796532 40.0 38.0 41.0 35.0 41.0 18 38.73132462176832 40.0 38.0 41.0 35.0 41.0 19 38.733145625083274 40.0 38.0 41.0 35.0 41.0 20 38.68909834090851 40.0 38.0 41.0 35.0 41.0 21 38.601352360776694 40.0 38.0 41.0 35.0 41.0 22 38.56389998882903 40.0 38.0 41.0 35.0 41.0 23 38.52328609671371 40.0 38.0 41.0 35.0 41.0 24 38.49492797413718 40.0 38.0 41.0 34.0 41.0 25 38.37923033336608 40.0 37.0 41.0 34.0 41.0 26 38.32865274018603 40.0 37.0 41.0 34.0 41.0 27 38.283602760172656 40.0 37.0 41.0 34.0 41.0 28 38.20529154222695 40.0 37.0 41.0 34.0 41.0 29 38.16099392056765 40.0 37.0 41.0 34.0 41.0 30 37.940434483584724 40.0 37.0 41.0 34.0 41.0 31 37.934734595159874 40.0 37.0 41.0 34.0 41.0 32 37.76637456140469 40.0 36.0 41.0 33.0 41.0 33 37.72148070584404 40.0 36.0 41.0 33.0 41.0 34 37.684779346349984 40.0 36.0 41.0 33.0 41.0 35 37.597921660518146 40.0 36.0 41.0 33.0 41.0 36 37.56077615387411 40.0 36.0 41.0 33.0 41.0 37 37.48185120532115 40.0 36.0 41.0 33.0 41.0 38 37.383229003616435 40.0 36.0 41.0 33.0 41.0 39 37.40665305512674 40.0 36.0 41.0 33.0 41.0 40 37.34265145081339 40.0 36.0 41.0 33.0 41.0 41 37.19794427164578 39.0 35.0 41.0 32.0 41.0 42 37.15601812658732 39.0 35.0 41.0 32.0 41.0 43 37.113170039717524 39.0 35.0 41.0 32.0 41.0 44 37.016744347554564 39.0 35.0 41.0 32.0 41.0 45 37.02467843073391 39.0 35.0 41.0 32.0 41.0 46 36.95214381753897 39.0 35.0 41.0 32.0 41.0 47 36.8589967388832 39.0 35.0 41.0 31.0 41.0 48 36.81132629068489 39.0 35.0 41.0 31.0 41.0 49 36.79006106350362 39.0 35.0 41.0 31.0 41.0 50 36.69855598340236 39.0 35.0 40.0 31.0 41.0 51 35.653481777180794 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 11.0 11 6.0 12 13.0 13 5.0 14 7.0 15 20.0 16 28.0 17 63.0 18 106.0 19 181.0 20 333.0 21 585.0 22 922.0 23 1406.0 24 2008.0 25 2850.0 26 3868.0 27 4732.0 28 5533.0 29 6777.0 30 8928.0 31 11951.0 32 16941.0 33 26808.0 34 41548.0 35 57604.0 36 71852.0 37 121698.0 38 174490.0 39 181583.0 40 132.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.589597266206997 4.358833211977975 54.131712510279314 17.91985701153571 2 20.227268750748657 4.607690206016982 53.01582644344459 22.149214599789772 3 21.091740612680805 4.480906383202086 51.962659337790065 22.46469366632705 4 19.759972112942584 4.578214986063201 51.129546956448 24.532265944546207 5 18.263465397572265 7.858174393705493 48.960897554095105 24.917462654627137 6 16.45470977675549 30.408871099075768 39.24066988157422 13.895749242594519 7 81.29211827234835 2.1152171543088327 10.89964024080851 5.693024332534317 8 81.26708452389444 2.878746482152687 9.551451755525257 6.302717238427611 9 75.27675078095874 5.368393142906364 12.350924700907271 7.003931375227626 10 36.283591992969015 29.312365998786 19.424439129633093 14.979602878611892 11 25.709928842242967 25.589336161518823 28.559873054669133 20.140861941569078 12 24.693370228951125 22.146926569017104 33.14629803350485 20.013405168526926 13 23.425801180893057 23.55312336388976 32.64912240560864 20.371953049608546 14 18.50599665947507 26.975344449573818 31.421392011004084 23.097266879947025 15 17.647581349588222 26.484225373722907 34.681028321783266 21.187164954905604 16 19.499540374994783 25.43657645993187 31.61708593708992 23.446797227983424 17 19.088367786141802 25.915986201828538 29.672394370367577 25.323251641662083 18 20.302369996110347 24.790544241766792 31.344541095051525 23.562544667071332 19 21.466304709171098 25.9359055285553 30.089219741129508 22.508570021144095 20 24.738996254359037 25.357706693297548 30.271050892533886 19.632246159809526 21 24.69794629049646 25.74196127306032 29.53632383441656 20.023768602026657 22 21.66940108775675 25.269550213527108 28.748702888436966 24.31234581027918 23 21.43198424758108 25.83900069583053 28.53201291526076 24.197002141327623 24 22.687843961684905 24.410192773322102 28.932956660659464 23.969006604333533 25 20.797661363370242 25.931733237146315 27.90415035323157 25.36645504625187 26 19.461316802086685 28.210208116587282 29.19325380856181 23.135221272764223 27 21.18312725354207 28.17319585408824 28.800250875844718 21.843426016524965 28 19.926056229029186 27.576154412467346 30.03861388403991 22.459175474463557 29 21.03669328409132 27.04398537275386 29.303752235877127 22.61556910727769 30 24.47789156618398 27.020297524754472 27.343044453746113 21.15876645531543 31 24.83388223640203 27.937932454639792 26.06645787264282 21.161727436315356 32 23.86362259874535 27.963773743366392 27.20953112865866 20.963072529229592 33 25.458918407476745 26.786918385942336 26.63846556580982 21.115697640771096 34 23.9773511871515 24.708444314041643 28.69446310012019 22.61974139868667 35 22.550696705370278 24.827960274402187 29.020440190202653 23.600902830024886 36 25.09700577525885 26.465651947450663 27.885576926959327 20.55176535033116 37 24.22930375223588 28.230800393541294 28.037798268364476 19.502097585858355 38 23.28596212366941 28.127973598816684 26.935505796120307 21.6505584813936 39 25.414369102432445 25.594854353382313 27.969022755138983 21.021753789046254 40 26.109795867278063 23.52983928602673 29.43215113923744 20.92821370745777 41 21.269668652767105 24.920827405763415 29.190292827561887 24.619211113907593 42 23.8126129715194 24.367931499050467 28.555162403078345 23.26429312635179 43 24.86685679753754 24.318133182233577 28.15650668845231 22.658503331776576 44 22.4519076120092 24.761607381994814 27.816128463506583 24.970356542489405 45 23.36240926948561 23.463620983664807 27.18476656029567 25.989203186553915 46 23.644375414705575 24.155279227237795 29.731613990366046 22.468731367690584 47 21.64059881803022 24.613019971816843 31.444810678912567 22.30157053124037 48 21.485685675716052 23.36442812016738 31.13081210287525 24.019074101241326 49 23.206688586898736 22.648543668413197 31.76580793731334 22.378959807374727 50 23.04746856313013 22.574653733460565 29.509002055189992 24.86887564821931 51 21.47787945307989 22.283266285059025 28.088942485635876 28.149911776225206 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 216.0 1 510.5 2 805.0 3 2111.5 4 3418.0 5 2343.5 6 1269.0 7 1308.5 8 1348.0 9 1542.0 10 1736.0 11 1834.5 12 1933.0 13 1960.5 14 1988.0 15 2033.0 16 2078.0 17 2114.5 18 2151.0 19 2272.0 20 2393.0 21 2525.5 22 2658.0 23 3020.0 24 3382.0 25 4306.0 26 6408.5 27 7587.0 28 8213.5 29 8840.0 30 10363.0 31 11886.0 32 13786.0 33 15686.0 34 18126.5 35 20567.0 36 21953.5 37 23340.0 38 25782.5 39 28225.0 40 31806.5 41 35388.0 42 39820.5 43 44253.0 44 49870.5 45 55488.0 46 64211.5 47 72935.0 48 82843.5 49 92752.0 50 84677.5 51 76603.0 52 62804.0 53 49005.0 54 42979.0 55 36953.0 56 34059.5 57 31166.0 58 29943.0 59 28720.0 60 26160.5 61 23601.0 62 20515.5 63 17430.0 64 14631.5 65 11833.0 66 9890.0 67 7947.0 68 6519.0 69 5091.0 70 3990.5 71 2890.0 72 2447.5 73 2005.0 74 1537.0 75 817.5 76 566.0 77 448.0 78 330.0 79 233.5 80 137.0 81 102.5 82 68.0 83 42.5 84 17.0 85 12.5 86 8.0 87 6.5 88 5.0 89 3.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 742997.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.92765920788209 #Duplication Level Percentage of deduplicated Percentage of total 1 72.48369955772156 27.491370549517768 2 9.9747130311835 7.566350330862967 3 3.781294295057929 4.302469241629976 4 2.2939591823373613 3.480180084179332 5 1.6594380505520832 3.146930042896581 6 1.3005445649986391 2.959596662755898 7 1.099817872989373 2.9199462234235076 8 0.9223523930502964 2.798613378654892 9 0.8240575136370866 2.8129115290429856 >10 5.531750226501197 33.112805611809975 >50 0.08206856996909925 2.1333203435424464 >100 0.03839905434297433 2.748572083846715 >500 0.004141074487967805 1.0631619603284468 >1k 0.0033881518537918404 2.709021202432396 >5k 3.7646131708798225E-4 0.7547507550760368 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGCT 5286 0.7114429802542944 TruSeq Adapter, Index 15 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 4960 0.6675666254372494 TruSeq Adapter, Index 21 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 3503 0.4714689292150574 TruSeq Adapter, Index 21 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 2555 0.3438775661274541 TruSeq Adapter, Index 21 (95% over 22bp) CTGTCACTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGCT 1564 0.21049883108545525 TruSeq Adapter, Index 15 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1375 0.18506131249520522 No Hit CCTGTATCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 1345 0.18102361113167348 TruSeq Adapter, Index 15 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTG 1343 0.18075443104077135 No Hit TCCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTG 1188 0.1598929739958573 No Hit TCTGTATCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 1140 0.1534326518142065 TruSeq Adapter, Index 15 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCC 921 0.12395743186042474 No Hit TTCCTGTCTCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCT 864 0.11628579926971441 No Hit GCTGTATCTTATACACATCTGACGCTAGAGGTGTCGTATGCCGTCTTCTGC 837 0.11265186804253584 TruSeq Adapter, Index 15 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3459004545105836E-4 0.0 0.0 0.7628563776165987 0.0 2 1.3459004545105836E-4 0.0 0.0 2.403239851574098 0.0 3 1.3459004545105836E-4 0.0 0.0 3.2853430094603344 0.0 4 1.3459004545105836E-4 0.0 0.0 4.182520252437089 0.0 5 1.3459004545105836E-4 0.0 0.0 5.530843327765791 0.0 6 1.3459004545105836E-4 0.0 0.0 6.319271814018092 0.0 7 1.3459004545105836E-4 0.0 0.0 7.277014577447823 0.0 8 1.3459004545105836E-4 0.0 0.0 8.608379307049692 0.0 9 1.3459004545105836E-4 0.0 0.0 9.242298421124177 0.0 10 1.3459004545105836E-4 0.0 0.0 10.443783756865775 0.0 11 1.3459004545105836E-4 0.0 0.0 12.50476112285783 0.0 12 1.3459004545105836E-4 0.0 0.0 14.265198917357674 0.0 13 1.3459004545105836E-4 0.0 0.0 14.897502950886746 0.0 14 1.3459004545105836E-4 0.0 0.0 15.148378795607519 0.0 15 1.3459004545105836E-4 0.0 0.0 15.527788133734052 0.0 16 1.3459004545105836E-4 0.0 0.0 16.39212540562075 0.0 17 1.3459004545105836E-4 0.0 0.0 17.581766817362656 0.0 18 1.3459004545105836E-4 0.0 0.0 18.82753227805765 0.0 19 1.3459004545105836E-4 0.0 0.0 19.68204447662642 0.0 20 2.691800909021167E-4 0.0 0.0 20.499006052514343 0.0 21 2.691800909021167E-4 0.0 0.0 21.51314204498807 0.0 22 2.691800909021167E-4 0.0 0.0 22.524855416643675 0.0 23 2.691800909021167E-4 0.0 0.0 23.47425359725544 0.0 24 2.691800909021167E-4 0.0 0.0 24.23872505541745 0.0 25 2.691800909021167E-4 0.0 0.0 24.89081382562783 0.0 26 2.691800909021167E-4 0.0 0.0 25.45595742647682 0.0 27 2.691800909021167E-4 0.0 0.0 26.024869548598446 0.0 28 2.691800909021167E-4 0.0 0.0 26.624737381173812 0.0 29 2.691800909021167E-4 0.0 0.0 27.232546026430793 0.0 30 2.691800909021167E-4 0.0 0.0 27.8823467658685 0.0 31 2.691800909021167E-4 0.0 0.0 28.50280687539788 0.0 32 2.691800909021167E-4 0.0 0.0 29.09002324370085 0.0 33 2.691800909021167E-4 0.0 0.0 29.662030936867847 0.0 34 2.691800909021167E-4 0.0 0.0 30.229731748580413 0.0 35 2.691800909021167E-4 0.0 0.0 30.790703058020423 0.0 36 2.691800909021167E-4 0.0 0.0 31.341849294142506 0.0 37 2.691800909021167E-4 0.0 0.0 31.90981928594597 0.0 38 2.691800909021167E-4 0.0 0.0 32.445218486750285 0.0 39 2.691800909021167E-4 0.0 0.0 32.98909686041801 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAAAC 20 7.031674E-4 45.0 10 CGTATAA 20 7.031674E-4 45.0 26 CGTAGTG 25 3.8894686E-5 45.0 35 CGGTACG 20 7.031674E-4 45.0 32 GCGCTAA 20 7.031674E-4 45.0 12 CCGTTAG 25 3.8894686E-5 45.0 1 TACGTTG 20 7.031674E-4 45.0 1 CCGATAA 30 2.164461E-6 44.999996 15 TCTCGTA 60 0.0 44.999996 28 CGATAAC 30 2.164461E-6 44.999996 16 GTAGGGA 430 0.0 42.38372 4 TAGGGAT 915 0.0 42.049183 5 GCGTTAG 75 0.0 42.000004 1 TTAGGGA 1775 0.0 41.957745 4 TCGTTAG 140 0.0 41.785713 1 GCGATGT 135 0.0 41.666668 9 CTAGGGA 910 0.0 41.538464 4 CGTTAGG 250 0.0 41.399998 2 TAGGGAC 685 0.0 41.386864 5 TCGTGTA 120 0.0 41.249996 17 >>END_MODULE