##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934296.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1289978 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.22081306812984 33.0 31.0 34.0 30.0 34.0 2 32.37791109615823 34.0 31.0 34.0 30.0 34.0 3 32.42931274796935 34.0 31.0 34.0 30.0 34.0 4 35.947592129478174 37.0 35.0 37.0 35.0 37.0 5 35.055390091924046 37.0 35.0 37.0 35.0 37.0 6 25.707324465998646 35.0 0.0 37.0 0.0 37.0 7 30.909210854758765 37.0 19.0 37.0 17.0 37.0 8 34.69989100589312 37.0 32.0 37.0 32.0 37.0 9 37.27115423673892 39.0 37.0 39.0 35.0 39.0 10 37.1296122879615 39.0 37.0 39.0 34.0 39.0 11 37.209409772879845 39.0 37.0 39.0 34.0 39.0 12 37.109375508729606 39.0 37.0 39.0 34.0 39.0 13 37.19315135606964 39.0 37.0 39.0 34.0 39.0 14 38.38593991525437 40.0 38.0 41.0 34.0 41.0 15 38.48611526708208 40.0 38.0 41.0 34.0 41.0 16 38.542186765975856 40.0 38.0 41.0 34.0 41.0 17 38.541777456669806 40.0 38.0 41.0 34.0 41.0 18 38.53358661930669 40.0 38.0 41.0 34.0 41.0 19 38.53437035360293 40.0 38.0 41.0 34.0 41.0 20 38.4689172993648 40.0 38.0 41.0 34.0 41.0 21 38.371654400307605 40.0 38.0 41.0 34.0 41.0 22 38.386015110335215 40.0 37.0 41.0 34.0 41.0 23 38.320676786735895 40.0 37.0 41.0 34.0 41.0 24 38.28031795891093 40.0 37.0 41.0 34.0 41.0 25 38.17209983426074 40.0 37.0 41.0 34.0 41.0 26 38.124980426022766 40.0 37.0 41.0 34.0 41.0 27 38.087827079221505 40.0 37.0 41.0 34.0 41.0 28 38.06109018913501 40.0 37.0 41.0 34.0 41.0 29 38.052091586058054 40.0 37.0 41.0 34.0 41.0 30 37.77297054678452 40.0 37.0 41.0 33.0 41.0 31 37.843913617131456 40.0 37.0 41.0 33.0 41.0 32 37.79214994364245 40.0 37.0 41.0 33.0 41.0 33 37.69427230541916 40.0 37.0 41.0 33.0 41.0 34 37.65609180931768 40.0 37.0 41.0 33.0 41.0 35 37.610523590324796 40.0 37.0 41.0 33.0 41.0 36 37.48721838667016 40.0 37.0 41.0 33.0 41.0 37 37.431630616956255 40.0 37.0 41.0 33.0 41.0 38 37.377054492402195 40.0 36.0 41.0 33.0 41.0 39 37.32701565453054 40.0 36.0 41.0 32.0 41.0 40 37.29845857836335 40.0 36.0 41.0 32.0 41.0 41 37.242962283077695 40.0 36.0 41.0 32.0 41.0 42 37.17819528705141 40.0 36.0 41.0 32.0 41.0 43 37.08037501414753 39.0 36.0 41.0 32.0 41.0 44 36.93159030619127 39.0 36.0 41.0 31.0 41.0 45 36.901036296743044 39.0 35.0 41.0 31.0 41.0 46 36.80817269751887 39.0 35.0 41.0 31.0 41.0 47 36.738379259181166 39.0 35.0 41.0 31.0 41.0 48 36.70012666882691 39.0 35.0 41.0 31.0 41.0 49 36.64650482411328 39.0 35.0 40.0 31.0 41.0 50 36.52195308757204 39.0 35.0 40.0 31.0 41.0 51 35.45103249822865 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 5.0 10 3.0 11 7.0 12 5.0 13 1.0 14 5.0 15 12.0 16 27.0 17 59.0 18 128.0 19 290.0 20 544.0 21 993.0 22 1492.0 23 2584.0 24 4035.0 25 6506.0 26 8501.0 27 9937.0 28 11287.0 29 13540.0 30 17172.0 31 23177.0 32 32150.0 33 49120.0 34 72483.0 35 98476.0 36 127911.0 37 219669.0 38 298954.0 39 290769.0 40 133.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.17599369911735 4.3434849276499286 58.54720002976796 12.93332134346477 2 20.490426968521945 4.081542475918194 53.99068821328736 21.4373423422725 3 19.79398098262141 4.265189018727451 53.909911641903975 22.03091835674717 4 17.918755203577117 4.069449246421257 53.533548634162756 24.478246915838874 5 16.563615813603022 7.604160691112562 52.89694863013168 22.93527486515274 6 14.261018404965045 31.75922380071598 41.728618627604504 12.251139166714472 7 83.43545393797413 1.463978455446527 10.501109321244238 4.599458285335099 8 85.31199756895079 1.4565364680637964 8.002229495386743 5.229236467598672 9 80.91812418506362 3.3262582772729457 10.481651625066474 5.273965912596959 10 37.10187305519939 19.8635170522288 24.54227901561112 18.49233087696069 11 26.197811125461058 27.42093276009358 24.58165953217807 21.799596582267295 12 20.823610945302942 23.411174454137978 33.83173976610454 21.933474834454543 13 21.888977951561962 26.106259176513085 34.03879756088863 17.96596531103631 14 20.67601152887879 27.13464880796417 32.96242261495932 19.226917048197723 15 18.48620674151032 27.789001052731134 34.26283238938959 19.461959816368964 16 18.859313879771594 25.15709570240733 32.560322734186165 23.423267683634915 17 18.526129902990593 26.57843777180696 29.73050703190287 25.16492529329958 18 20.15763059525046 25.582296752347716 32.8650566133686 21.395016039033223 19 21.079584302988113 28.511804077278835 29.868571401992906 20.540040217740145 20 21.677423956067468 27.56628407616254 31.055878472346038 19.700413495423952 21 21.441605980877192 28.598937346218307 30.40974342198084 19.54971325092366 22 20.30546257378033 25.47795388758568 29.34189575326091 24.874687785373084 23 18.7176060366921 27.519539092914762 28.534750205042258 25.22810466535088 24 20.293679427091003 26.028350871100127 29.993379732057445 23.68458996975142 25 19.47560345990397 27.147904847989658 28.259164109775515 25.117327582330862 26 19.33474834454541 28.459787686301624 29.818725590668986 22.386738378483976 27 19.88809111473219 28.526920614150008 29.465618793498805 22.119369477618996 28 17.690689298577187 26.160213585037884 31.046188384608108 25.102908731776818 29 19.23032795908147 24.64406369721034 29.88787405676686 26.23773428694133 30 19.739483929183287 28.821111677873578 28.269784445936285 23.169619947006847 31 18.413104719615372 28.70731128747932 28.15458868290777 24.724995309997535 32 18.768692179246468 28.479788027392715 28.56141732649704 24.190102466863774 33 19.778321800836913 28.375522683332584 27.558144402462677 24.288011113367823 34 18.22705503504711 26.275331827364496 29.653528974912753 25.84408416267564 35 19.591496909249614 26.13416662919833 28.45118288839035 25.82315357316171 36 21.470366161283373 28.448934788035146 27.434266320820978 22.64643272986051 37 17.577896677307674 27.97667867203937 29.873377685510917 24.572046965142043 38 17.08494253390368 28.20272903878981 28.347227627137826 26.365100800168683 39 19.76762394397424 26.612546880644476 29.372981554724188 24.246847620657096 40 20.184142675301437 25.38818491478149 31.557592455065127 22.870079954851942 41 19.71475482527609 25.121591220935553 30.990450999939533 24.173202953848826 42 22.340380998745715 24.836237517228977 29.126620764075046 23.696760719950262 43 21.86432636835667 24.69925843696559 28.35156878644442 25.084846408233318 44 19.42568012787815 24.891122174176612 26.959219459556678 28.723978238388558 45 20.49686118677993 24.59476053079975 26.821930296485675 28.086447985934644 46 21.252998113146116 25.25911294611226 29.29329027316745 24.194598667574176 47 18.847608253784173 25.52407870521823 31.332162253929912 24.296150787067685 48 18.878694055247454 24.388943067246107 30.321214780407107 26.41114809709933 49 20.66453846499708 22.84519580954094 31.083243280117955 25.40702244534403 50 19.978480253151602 22.18200620475698 29.75190274562822 28.087610796463196 51 18.415972985585803 22.63588991440164 28.087610796463196 30.860526303549364 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 69.0 1 329.5 2 590.0 3 2975.5 4 5361.0 5 3808.0 6 2255.0 7 2290.0 8 2325.0 9 2528.5 10 2732.0 11 2799.5 12 2867.0 13 3011.5 14 3156.0 15 3131.0 16 3106.0 17 3090.5 18 3075.0 19 3061.0 20 3047.0 21 3270.5 22 3494.0 23 4110.0 24 4726.0 25 5654.0 26 7781.5 27 8981.0 28 11084.5 29 13188.0 30 16344.5 31 19501.0 32 24148.5 33 28796.0 34 31156.0 35 33516.0 36 38196.0 37 42876.0 38 47932.0 39 52988.0 40 62197.5 41 71407.0 42 81013.5 43 90620.0 44 102952.0 45 115284.0 46 134801.5 47 154319.0 48 170610.0 49 186901.0 50 172290.0 51 157679.0 52 129453.5 53 101228.0 54 81521.0 55 61814.0 56 51146.5 57 40479.0 58 33346.5 59 26214.0 60 21548.5 61 16883.0 62 13884.0 63 10885.0 64 8380.5 65 5876.0 66 4634.0 67 3392.0 68 2574.0 69 1756.0 70 1386.0 71 1016.0 72 715.0 73 414.0 74 342.5 75 223.0 76 175.0 77 123.0 78 71.0 79 43.0 80 15.0 81 19.0 82 23.0 83 18.0 84 13.0 85 8.0 86 3.0 87 4.0 88 5.0 89 3.5 90 2.0 91 1.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1289978.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.0058314051805 #Duplication Level Percentage of deduplicated Percentage of total 1 70.39854670517596 27.459538439518187 2 13.226842296204532 10.31847961257329 3 5.124291897976303 5.9963179753018805 4 2.5692346541994238 4.008605350481997 5 1.5683491051961707 3.058738039087376 6 1.0061116300778732 2.354653237056531 7 0.7874900471088966 2.150169280755109 8 0.6355676802523377 1.9832676626003483 9 0.4984337432959385 1.7497640301888953 >10 3.9855698527871777 29.389317909331147 >50 0.12754138261973202 3.4004434383868998 >100 0.06574010449060891 4.503602159081557 >500 0.0031404503075485105 0.7920583292538912 >1k 0.0031404503075485105 2.835044536382935 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGCT 4930 0.38217706038397553 TruSeq Adapter, Index 20 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 4908 0.38047160494209975 TruSeq Adapter, Index 27 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 4601 0.3566727494577427 TruSeq Adapter, Index 27 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 4247 0.32923042098392374 TruSeq Adapter, Index 27 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2133 0.16535165716004457 No Hit TCCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTG 1933 0.14984751677935593 No Hit TCTGTATCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 1767 0.13697908026338435 TruSeq Adapter, Index 20 (95% over 21bp) GCTGTATCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 1754 0.13597131113863958 TruSeq Adapter, Index 20 (95% over 21bp) TTCCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCT 1349 0.10457542686774504 No Hit CTGTCACTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGCT 1347 0.10442038546393814 TruSeq Adapter, Index 20 (95% over 22bp) CCTGTATCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 1317 0.10209476440683485 TruSeq Adapter, Index 20 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5504140380688663E-4 0.0 0.0 0.4037278155131328 0.0 2 1.5504140380688663E-4 0.0 0.0 1.582895212166409 0.0 3 1.5504140380688663E-4 0.0 0.0 2.274844997356544 0.0 4 1.5504140380688663E-4 0.0 0.0 3.056486234648963 0.0 5 1.5504140380688663E-4 0.0 0.0 4.325422604106427 0.0 6 1.5504140380688663E-4 0.0 0.0 5.175282059073876 0.0 7 1.5504140380688663E-4 0.0 0.0 6.180648042059632 0.0 8 1.5504140380688663E-4 0.0 0.0 7.860056528095828 0.0 9 1.5504140380688663E-4 0.0 0.0 8.507741992499097 0.0 10 1.5504140380688663E-4 0.0 0.0 10.109164652420429 0.0 11 1.5504140380688663E-4 0.0 0.0 12.939290437511337 0.0 12 1.5504140380688663E-4 0.0 0.0 15.204522867831855 0.0 13 1.5504140380688663E-4 0.0 0.0 15.967791698773157 0.0 14 1.5504140380688663E-4 0.0 0.0 16.188183054284647 0.0 15 1.5504140380688663E-4 0.0 0.0 16.54237514128148 0.0 16 1.5504140380688663E-4 0.0 0.0 17.556035839370903 0.0 17 1.5504140380688663E-4 0.0 0.0 19.206684145000924 0.0 18 1.5504140380688663E-4 0.0 0.0 20.929426703401145 0.0 19 1.5504140380688663E-4 0.0 0.0 22.049755887309708 0.0 20 1.5504140380688663E-4 0.0 0.0 23.115743059183956 0.0 21 1.5504140380688663E-4 0.0 0.0 24.757011359883656 0.0 22 1.5504140380688663E-4 0.0 0.0 26.553786188601666 0.0 23 1.5504140380688663E-4 0.0 0.0 28.470330501760497 0.0 24 1.5504140380688663E-4 0.0 0.0 29.800895829231195 0.0 25 1.5504140380688663E-4 0.0 0.0 31.01967630455713 0.0 26 1.5504140380688663E-4 0.0 0.0 32.0590738756785 0.0 27 1.5504140380688663E-4 0.0 0.0 33.05909093023292 0.0 28 1.5504140380688663E-4 0.0 0.0 34.16709432253884 0.0 29 1.5504140380688663E-4 0.0 0.0 35.20656941436211 0.0 30 1.5504140380688663E-4 0.0 0.0 36.30465015682438 0.0 31 1.5504140380688663E-4 0.0 0.0 37.410482969477 0.0 32 1.5504140380688663E-4 0.0 0.0 38.43724466618811 0.0 33 1.5504140380688663E-4 0.0 0.0 39.417493941757144 0.0 34 1.5504140380688663E-4 0.0 0.0 40.361153446027764 0.0 35 1.5504140380688663E-4 0.0 0.0 41.316363534881994 0.0 36 1.5504140380688663E-4 0.0 0.0 42.26095328757545 0.0 37 1.5504140380688663E-4 0.0 0.0 43.25562141369853 0.0 38 1.5504140380688663E-4 0.0 0.0 44.222537128540175 0.0 39 1.5504140380688663E-4 0.0 0.0 45.18069300406673 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 160 0.0 45.000004 1 AGTCCGC 20 7.033607E-4 45.000004 11 GCGACTC 40 6.8157533E-9 45.000004 9 TATTGCG 45 3.8562575E-10 45.000004 1 GTGTCGT 20 7.033607E-4 45.000004 14 GCGATCG 20 7.033607E-4 45.000004 9 GCGATAT 50 2.1827873E-11 45.000004 9 TCCGTAG 25 3.8910708E-5 45.000004 1 TCGCGCG 40 6.8157533E-9 45.000004 1 TCGCGAG 25 3.8910708E-5 45.000004 1 GCATCCG 25 3.8910708E-5 45.000004 1 GTCGGTC 20 7.033607E-4 45.000004 10 CGGACGG 50 2.1827873E-11 45.000004 2 CGCGCGG 70 0.0 45.0 2 CGTAAGG 30 2.1657088E-6 44.999996 2 ACGAAGC 30 2.1657088E-6 44.999996 11 TAGGGCG 685 0.0 44.343063 5 CGTTTAT 800 0.0 42.750004 1 GCGCTAG 70 0.0 41.785713 1 TTAGGGT 1900 0.0 41.447372 4 >>END_MODULE