##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934295.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1211825 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.38847275803025 33.0 31.0 34.0 31.0 34.0 2 32.55603490603016 34.0 31.0 34.0 31.0 34.0 3 32.60521362407938 34.0 31.0 34.0 31.0 34.0 4 36.06508695562478 37.0 35.0 37.0 35.0 37.0 5 35.2096721886411 37.0 35.0 37.0 35.0 37.0 6 26.29923875146989 37.0 0.0 37.0 0.0 37.0 7 31.224483733212303 37.0 19.0 37.0 17.0 37.0 8 34.83287190807253 37.0 32.0 37.0 32.0 37.0 9 37.33930064159429 39.0 37.0 39.0 35.0 39.0 10 37.36177088275947 39.0 37.0 39.0 34.0 39.0 11 37.420930414870135 39.0 37.0 39.0 35.0 39.0 12 37.235723805004845 39.0 37.0 39.0 34.0 39.0 13 37.29067150784973 39.0 37.0 39.0 34.0 39.0 14 38.50792977533885 40.0 38.0 41.0 34.0 41.0 15 38.63778185794153 40.0 38.0 41.0 35.0 41.0 16 38.67493078621088 40.0 38.0 41.0 35.0 41.0 17 38.665555670166896 40.0 38.0 41.0 35.0 41.0 18 38.634523961793164 40.0 38.0 41.0 35.0 41.0 19 38.64386441936748 40.0 38.0 41.0 35.0 41.0 20 38.585445093144635 40.0 38.0 41.0 35.0 41.0 21 38.49500546696099 40.0 38.0 41.0 34.0 41.0 22 38.47317723268624 40.0 38.0 41.0 34.0 41.0 23 38.43171910135539 40.0 37.0 41.0 34.0 41.0 24 38.38073071606874 40.0 37.0 41.0 34.0 41.0 25 38.276143832649105 40.0 37.0 41.0 34.0 41.0 26 38.21996988013946 40.0 37.0 41.0 34.0 41.0 27 38.18756998741568 40.0 37.0 41.0 34.0 41.0 28 38.124587296020465 40.0 37.0 41.0 34.0 41.0 29 38.095173808099354 40.0 37.0 41.0 34.0 41.0 30 37.846561178387965 40.0 37.0 41.0 33.0 41.0 31 37.873709487756074 40.0 37.0 41.0 33.0 41.0 32 37.813787469312814 40.0 36.0 41.0 33.0 41.0 33 37.723064798960245 40.0 36.0 41.0 33.0 41.0 34 37.634050296041096 40.0 36.0 41.0 33.0 41.0 35 37.594086604914075 40.0 36.0 41.0 33.0 41.0 36 37.49490726796361 40.0 36.0 41.0 33.0 41.0 37 37.399828358055 40.0 36.0 41.0 33.0 41.0 38 37.32389990303881 40.0 36.0 41.0 33.0 41.0 39 37.24849215026922 40.0 35.0 41.0 32.0 41.0 40 37.177008231386544 39.0 35.0 41.0 32.0 41.0 41 37.14456460297485 39.0 35.0 41.0 32.0 41.0 42 37.10341097105605 39.0 35.0 41.0 32.0 41.0 43 36.96042993006416 39.0 35.0 41.0 32.0 41.0 44 36.79634848266045 39.0 35.0 41.0 31.0 41.0 45 36.77541724258866 39.0 35.0 41.0 31.0 41.0 46 36.73938646256679 39.0 35.0 41.0 31.0 41.0 47 36.692594227714395 39.0 35.0 41.0 31.0 41.0 48 36.63249974212448 39.0 35.0 41.0 31.0 41.0 49 36.57214284240711 39.0 35.0 41.0 31.0 41.0 50 36.44938089245559 39.0 35.0 40.0 31.0 41.0 51 35.485901017061046 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 10.0 10 11.0 11 18.0 12 8.0 13 5.0 14 6.0 15 18.0 16 37.0 17 73.0 18 164.0 19 288.0 20 553.0 21 954.0 22 1465.0 23 2307.0 24 3639.0 25 5440.0 26 7204.0 27 8634.0 28 10250.0 29 12272.0 30 15550.0 31 21449.0 32 29312.0 33 46560.0 34 70600.0 35 94485.0 36 114624.0 37 194498.0 38 275097.0 39 296106.0 40 187.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.893136385204134 4.3037567305510285 55.54465372475399 16.258453159490852 2 20.32372661069049 4.1114022239184695 53.71542920801271 21.849441957378335 3 20.829987828275534 4.354094031729003 52.11041198192808 22.70550615806738 4 19.07090545251996 4.6329296721886415 51.22893157015246 25.06723330513894 5 17.74917995585171 8.045716171889506 50.37294988962928 23.832153982629507 6 16.09143234377901 30.77936170651703 40.39419883233965 12.735007117364304 7 85.47999917479834 2.1344666102778866 8.440492645390217 3.945041569533555 8 87.1534256183855 2.193798609535205 6.565716997091164 4.0870587749881375 9 82.06432446929219 4.428362181007984 8.746890021248943 4.760423328450891 10 40.096961194892 23.77917603614383 18.921543952303345 17.20231881666082 11 28.532667670662015 25.67334392342129 24.30631485569286 21.487673550223835 12 24.477956800693168 22.43252944938419 31.30996637303241 21.779547376890225 13 23.56322076207373 23.247746167969797 33.225011862273846 19.964021207682627 14 20.93594372124688 25.261980896581605 32.921255131722816 20.880820250448703 15 19.743444804324056 25.068141026963463 34.27615373506901 20.91226043364347 16 22.214181090503992 24.050749902007304 31.45858519175623 22.27648381573247 17 22.54104346749737 24.196645555257565 29.21469684154065 24.04761413570441 18 23.066449363563223 24.150846863202194 30.998040146060696 21.78466362717389 19 23.589792255482433 25.717079611330018 28.93239535411466 21.760732779072885 20 24.65454995564541 26.133228807789905 29.33121531574279 19.881005920821902 21 25.231448435211355 25.933282445897714 29.05815608689373 19.777113031997196 22 24.000082520165865 23.861036040682443 28.88205805293669 23.256823386215007 23 22.195283972520784 25.25183091618014 28.265137292925957 24.287747818373116 24 21.987828275534834 25.15511728178574 29.390464794834237 23.466589647845193 25 22.275988694737276 26.32946176221814 27.546964289398225 23.84758525364636 26 21.771873001464733 26.7356260186083 28.304746972541416 23.187754007385557 27 21.26371382006478 26.112268685660055 30.0487281579436 22.575289336331565 28 19.51965011449673 25.591401398716812 30.88028386937058 24.00866461741588 29 21.039093928578797 24.85556907969385 29.98642543271512 24.118911559012236 30 21.709322715738658 26.038743217873865 29.68398902481794 22.567945041569534 31 22.221690425597757 27.11563138241908 27.956429352422994 22.706248839560168 32 22.894559858065314 27.57213293998721 26.82961648752914 22.703690714418336 33 22.823097394425762 26.75897922554824 26.777298702370388 23.6406246776556 34 21.667815072308294 26.514967095083865 27.740804159016356 24.076413673591485 35 22.84867864584408 26.274008210756506 27.062488395601676 23.814824747797743 36 24.096878674726135 27.008437686959752 27.267881088440987 21.626802549873126 37 21.677304891382832 27.1361789037196 28.314731912611148 22.871784292286428 38 21.075815402388958 29.021929734078768 26.281435025684402 23.620819837847872 39 21.81420584655375 28.401708167433416 26.94283415509665 22.84125183091618 40 23.14558620262827 26.84158191157964 27.04119819280837 22.971633692983723 41 22.846368081199845 25.777979493738783 26.68644399975244 24.689208425308934 42 24.021290202793306 24.405834175726692 27.391001175912365 24.181874445567637 43 23.19988447176779 24.25185154622161 28.740040847482103 23.8082231345285 44 21.795473768902276 25.15907824974728 27.823819445877085 25.221628535473357 45 22.336228415819114 25.396323726610692 26.732160171641944 25.53528768592825 46 22.69494357683659 25.8715573618303 28.200028882058053 23.23347017927506 47 21.141831535081383 25.74662183070988 29.31190559693025 23.799641037278484 48 21.43568584572855 25.845563509582654 29.42091473603862 23.29783590865018 49 22.961401192416396 24.77651476079467 28.881232851278032 23.380851195510903 50 21.577868091514866 25.660635817877992 27.491263177438984 25.270232913168154 51 20.943040455511316 25.194066800074268 26.39927382254038 27.463618921874033 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 176.0 1 656.5 2 1137.0 3 3188.5 4 5240.0 5 3610.5 6 1981.0 7 2005.5 8 2030.0 9 2134.0 10 2238.0 11 2291.5 12 2345.0 13 2328.0 14 2311.0 15 2265.0 16 2219.0 17 2246.0 18 2273.0 19 2436.5 20 2600.0 21 3136.5 22 3673.0 23 4301.0 24 4929.0 25 5997.5 26 8175.5 27 9285.0 28 11148.5 29 13012.0 30 15988.5 31 18965.0 32 22306.5 33 25648.0 34 29053.0 35 32458.0 36 35904.5 37 39351.0 38 43877.0 39 48403.0 40 54670.0 41 60937.0 42 69219.5 43 77502.0 44 83100.0 45 88698.0 46 100066.0 47 111434.0 48 122754.5 49 134075.0 50 127469.0 51 120863.0 52 106198.0 53 91533.0 54 80920.5 55 70308.0 56 63317.5 57 56327.0 58 51460.5 59 46594.0 60 41588.5 61 36583.0 62 32674.5 63 28766.0 64 25055.0 65 21344.0 66 17904.0 67 14464.0 68 12327.0 69 10190.0 70 8261.5 71 6333.0 72 5110.0 73 3887.0 74 3104.5 75 1779.0 76 1236.0 77 935.5 78 635.0 79 431.5 80 228.0 81 162.0 82 96.0 83 78.5 84 61.0 85 57.5 86 54.0 87 31.0 88 8.0 89 6.5 90 5.0 91 3.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1211825.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.24400403980711 #Duplication Level Percentage of deduplicated Percentage of total 1 71.59718574298498 25.949686893075675 2 11.283412759568797 8.179121152812453 3 4.011088109759205 4.3613368096240475 4 2.1554708208602067 3.1249157255577478 5 1.4468728716166863 2.622023310198125 6 1.091095498960516 2.372740180328418 7 0.9161351977724037 2.3243085466350744 8 0.8083184934370821 2.343735899326752 9 0.6619666673737413 2.159309030986038 >10 5.900633761368647 40.76487041637066 >50 0.09242383867665563 2.2540446594353334 >100 0.03207041672635142 1.9396779894430127 >500 0.002138027718055722 0.5723978617165182 >1k 0.001187793176697623 1.0318315244901854 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGCT 2883 0.23790563819033275 Illumina Single End Adapter 1 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 2863 0.23625523487302208 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 2146 0.17708827594743465 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 2047 0.16891877952674683 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2045 0.1687537391950158 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.25432715119757393 0.0 2 0.0 0.0 0.0 0.8930332349968023 0.0 3 0.0 0.0 0.0 1.2615682957522745 0.0 4 0.0 0.0 0.0 1.6848967466424607 0.0 5 0.0 0.0 0.0 2.405380314814433 0.0 6 8.252016586553339E-5 0.0 0.0 2.9595032286014895 0.0 7 8.252016586553339E-5 0.0 0.0 3.591855259629072 0.0 8 8.252016586553339E-5 0.0 0.0 4.601406968828007 0.0 9 8.252016586553339E-5 0.0 0.0 5.078373527530791 0.0 10 8.252016586553339E-5 0.0 0.0 6.029418439131063 0.0 11 8.252016586553339E-5 0.0 0.0 7.841726321869907 0.0 12 8.252016586553339E-5 0.0 0.0 9.394013161966456 0.0 13 8.252016586553339E-5 0.0 0.0 9.930971881253482 0.0 14 8.252016586553339E-5 0.0 0.0 10.113011367152849 0.0 15 8.252016586553339E-5 0.0 0.0 10.372784849297547 0.0 16 8.252016586553339E-5 0.0 0.0 11.030140490582387 0.0 17 8.252016586553339E-5 0.0 0.0 11.976729313225919 0.0 18 8.252016586553339E-5 0.0 0.0 12.98768386524457 0.0 19 8.252016586553339E-5 0.0 0.0 13.71171580054876 0.0 20 8.252016586553339E-5 0.0 0.0 14.452251769026056 0.0 21 8.252016586553339E-5 0.0 0.0 15.545478926412642 0.0 22 8.252016586553339E-5 0.0 0.0 16.684999896849792 0.0 23 8.252016586553339E-5 0.0 0.0 17.831370041053784 0.0 24 8.252016586553339E-5 0.0 0.0 18.72357807439193 0.0 25 8.252016586553339E-5 0.0 0.0 19.489942854785138 0.0 26 8.252016586553339E-5 0.0 0.0 20.186082974026778 0.0 27 8.252016586553339E-5 0.0 0.0 20.8592824871578 0.0 28 8.252016586553339E-5 0.0 0.0 21.585212386276897 0.0 29 8.252016586553339E-5 0.0 0.0 22.340684504775854 0.0 30 8.252016586553339E-5 0.0 0.0 23.17158005487591 0.0 31 8.252016586553339E-5 0.0 0.0 23.923833886906113 0.0 32 8.252016586553339E-5 0.0 0.0 24.63936624512615 0.0 33 8.252016586553339E-5 0.0 0.0 25.362738019103418 0.0 34 8.252016586553339E-5 0.0 0.0 26.072824046376333 0.0 35 8.252016586553339E-5 0.0 0.0 26.824417717079612 0.0 36 8.252016586553339E-5 0.0 0.0 27.541517958451095 0.0 37 8.252016586553339E-5 0.0 0.0 28.2719864666928 0.0 38 8.252016586553339E-5 0.0 0.0 29.0168134837951 0.0 39 8.252016586553339E-5 0.0 0.0 29.84506838858746 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTCGAC 20 7.0334383E-4 45.0 19 TATTCGC 20 7.0334383E-4 45.0 32 CGGTCTA 25 3.890931E-5 45.0 31 GCCGATT 205 0.0 43.902443 9 CGTTAGG 330 0.0 41.590908 2 TAGGGCG 605 0.0 41.280994 5 TCGTTAG 180 0.0 41.250004 1 TTAGGGT 1280 0.0 40.95703 4 CGAGGGT 165 0.0 40.90909 4 AGGGCGA 785 0.0 40.700634 6 GTTAGGG 1765 0.0 40.66572 3 TTTAGGG 4815 0.0 40.46729 3 TTAGGGA 2430 0.0 40.27778 4 CGTTTAT 520 0.0 40.240383 1 TGTAGGG 1635 0.0 40.183483 3 CTTAGGG 2200 0.0 39.68182 3 CTCGTAG 80 0.0 39.375 1 ATTACGA 40 3.4584264E-7 39.375 29 TTGAGGG 2035 0.0 39.361176 3 CGTTTTT 1425 0.0 39.157894 1 >>END_MODULE