##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934293.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1225408 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.10702721052906 33.0 31.0 34.0 30.0 34.0 2 32.261399468585154 34.0 31.0 34.0 30.0 34.0 3 32.29890371206977 34.0 31.0 34.0 30.0 34.0 4 35.867615520708206 37.0 35.0 37.0 35.0 37.0 5 34.99997225413903 37.0 35.0 37.0 35.0 37.0 6 25.772754054159922 35.0 0.0 37.0 0.0 37.0 7 30.936631717762573 36.0 19.0 37.0 17.0 37.0 8 34.68518322060897 37.0 32.0 37.0 32.0 37.0 9 37.26018109886666 39.0 37.0 39.0 35.0 39.0 10 37.10647474147386 39.0 37.0 39.0 34.0 39.0 11 37.14583958975297 39.0 37.0 39.0 34.0 39.0 12 37.096200612367475 39.0 37.0 39.0 34.0 39.0 13 37.170615827544786 39.0 37.0 39.0 34.0 39.0 14 38.30598217083616 40.0 38.0 41.0 34.0 41.0 15 38.392483972685014 40.0 38.0 41.0 34.0 41.0 16 38.45566864260719 40.0 38.0 41.0 34.0 41.0 17 38.451536957486816 40.0 38.0 41.0 34.0 41.0 18 38.427838727999166 40.0 38.0 41.0 34.0 41.0 19 38.41005118295294 40.0 37.0 41.0 34.0 41.0 20 38.32887087402726 40.0 37.0 41.0 34.0 41.0 21 38.24000414555805 40.0 37.0 41.0 34.0 41.0 22 38.25701072622343 40.0 37.0 41.0 34.0 41.0 23 38.19378198934559 40.0 37.0 41.0 34.0 41.0 24 38.12346173682561 40.0 37.0 41.0 34.0 41.0 25 38.02123456024442 40.0 37.0 41.0 34.0 41.0 26 37.96934327179193 40.0 37.0 41.0 34.0 41.0 27 37.91655269102209 40.0 37.0 41.0 34.0 41.0 28 37.86322922651068 40.0 37.0 41.0 33.0 41.0 29 37.87521380634042 40.0 37.0 41.0 33.0 41.0 30 37.5981191570481 40.0 36.0 41.0 33.0 41.0 31 37.59029237609025 40.0 36.0 41.0 33.0 41.0 32 37.5044189363869 40.0 36.0 41.0 33.0 41.0 33 37.333327348931945 39.0 36.0 41.0 32.0 41.0 34 37.26740073510211 39.0 36.0 41.0 32.0 41.0 35 37.20054626703922 40.0 36.0 41.0 32.0 41.0 36 36.97140544210581 39.0 36.0 41.0 31.0 41.0 37 36.862049211364706 39.0 35.0 41.0 31.0 41.0 38 36.85771188045125 39.0 36.0 41.0 31.0 41.0 39 36.86744904554238 39.0 36.0 41.0 31.0 41.0 40 36.88798914320781 39.0 36.0 41.0 31.0 41.0 41 36.74452508878675 39.0 35.0 41.0 31.0 41.0 42 36.54382213923852 39.0 35.0 40.0 30.0 41.0 43 36.40306575442628 39.0 35.0 40.0 30.0 41.0 44 36.32828086645427 39.0 35.0 40.0 30.0 41.0 45 36.36612377265368 39.0 35.0 40.0 30.0 41.0 46 36.21372636705489 39.0 35.0 40.0 29.0 41.0 47 36.051209882749255 39.0 35.0 40.0 29.0 41.0 48 35.97522457826291 39.0 35.0 40.0 29.0 41.0 49 35.94143419987466 39.0 35.0 40.0 29.0 41.0 50 35.83855662767013 38.0 35.0 40.0 29.0 41.0 51 34.77337262364861 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 7.0 11 1.0 12 4.0 13 7.0 14 5.0 15 19.0 16 36.0 17 65.0 18 127.0 19 304.0 20 560.0 21 1141.0 22 1858.0 23 3083.0 24 5176.0 25 7996.0 26 10685.0 27 11800.0 28 12707.0 29 14825.0 30 18616.0 31 24559.0 32 33659.0 33 49476.0 34 71663.0 35 98060.0 36 132926.0 37 219249.0 38 279666.0 39 227042.0 40 83.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.726056954092027 4.366300856531049 60.305057580822066 11.602584608554865 2 22.131159581135424 4.073173995926255 52.54576434950645 21.24990207343187 3 18.328426124197 3.654211495273411 55.04150454379276 22.975857836736825 4 16.6741199665744 4.090392750822583 55.42260210476837 23.812885177834648 5 15.664252232725753 7.152801352692329 54.33520917114952 22.84773724343239 6 13.784388546508591 30.929943333159244 42.653467253355615 12.63220086697655 7 81.1512573771348 0.8013657492035305 12.849271426333106 5.1981054473285635 8 82.52435107327518 1.0221085548649917 10.246220034470152 6.207320337389669 9 78.36940839295973 2.749370005745025 12.966456886196271 5.914764715098971 10 36.136862171619576 23.529714184989817 23.369685851569436 16.963737791821174 11 22.282700945317803 27.03197628871364 28.456399827649243 22.228922938319318 12 20.063684911474382 22.399070350446546 34.91783960933827 22.619405128740794 13 21.63801770512352 24.965317673787016 35.45814944899984 17.938515172089623 14 20.05650362981146 26.561194312424924 32.8618713114326 20.520430746331016 15 16.487080221444614 27.916171593461115 34.82554381887502 20.77120436621925 16 17.72242387841437 26.77500065284379 31.8626938946049 23.63988157413694 17 17.96307841959576 27.918619757664388 29.183994228860914 24.934307593878938 18 19.262808795111503 25.613591554812764 33.83509818770565 21.288501462370085 19 19.21351908915235 30.11103240716561 30.22470883167076 20.45073967201128 20 20.023208596646995 29.552361335979526 30.923006867916648 19.501423199456834 21 19.682668955972215 29.565744633624064 31.31259139813026 19.438995012273462 22 18.46837951115057 26.8099277954771 29.388742361727687 25.332950331644643 23 17.92758003864835 27.552292787381838 28.19730244946989 26.32282472449992 24 19.066139604115527 27.026998354833655 29.786405833812086 24.120456207238732 25 18.54582310544733 28.16980140491983 27.33856805243641 25.94580743719643 26 18.50502036872617 29.648819005588344 29.330231237269544 22.51592938841594 27 18.834298454065912 29.499970622029558 29.4379504622134 22.227780461691125 28 16.35406329973364 27.732640883689353 30.7344982242649 25.17879759231211 29 17.446760589126235 25.196832401942864 30.813165900663293 26.543241108267612 30 20.49431699482948 28.265932652634877 29.61021961665013 21.629530735885517 31 19.925853266830313 31.3317686843892 26.419445605055625 22.322932443724866 32 19.572175144931318 30.689533608398182 25.829927664908343 23.908363581762156 33 19.55038648352222 28.070895571107744 28.454604507233512 23.924113438136523 34 19.786960751031494 27.1167643756202 28.081504282655246 25.014770590693058 35 21.70215960724918 25.16541429466757 26.874722541390295 26.257703556692952 36 21.40642137149423 29.738176999007678 28.048209249490778 20.80719238000731 37 18.349806758238888 31.82809317386536 28.659515851047164 21.162584216848593 38 17.341489528385647 29.810153026583798 28.34288661409098 24.505470830939576 39 19.066955658849952 24.453080116989607 32.9436399958218 23.536324228338643 40 24.612863633989658 23.064073353527967 30.34156786964015 21.98149514284222 41 24.395221836319006 24.770443803206767 27.333263696662662 23.501070663811564 42 22.683873452760224 25.97543022405599 29.10940682613464 22.231289497049143 43 19.98256907087272 26.279410612628613 30.323696270956287 23.414324045542383 44 18.586707447641928 25.944583355094792 26.963590901968974 28.505118295294302 45 22.225332297487856 23.41489528385648 26.228896824567816 28.130875594087847 46 23.65579464145819 24.93447080482582 28.2715634303024 23.13817112341359 47 20.200945317804354 27.020551522431713 30.16791142215491 22.610591737609028 48 18.945526714367787 26.16018501592939 30.439494437770932 24.454793831931894 49 21.312085444194913 23.165345746069878 32.0559356557163 23.466633154018908 50 21.20167323862746 21.297314853501852 29.614381495795687 27.886630412074997 51 20.797318117720792 20.897774455528282 27.054825821277483 31.25008160547344 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 74.0 1 234.5 2 395.0 3 4398.0 4 8401.0 5 5750.0 6 3099.0 7 3213.0 8 3327.0 9 3742.0 10 4157.0 11 4426.5 12 4696.0 13 4839.0 14 4982.0 15 5016.0 16 5050.0 17 5107.0 18 5164.0 19 5250.5 20 5337.0 21 5261.5 22 5186.0 23 5525.5 24 5865.0 25 6217.5 26 7469.5 27 8369.0 28 9627.0 29 10885.0 30 12193.0 31 13501.0 32 16869.0 33 20237.0 34 23881.5 35 27526.0 36 32209.5 37 36893.0 38 41427.5 39 45962.0 40 53955.0 41 61948.0 42 72786.0 43 83624.0 44 97579.0 45 111534.0 46 137419.0 47 163304.0 48 182132.5 49 200961.0 50 182417.5 51 163874.0 52 129858.0 53 95842.0 54 73856.0 55 51870.0 56 40069.0 57 28268.0 58 22100.0 59 15932.0 60 12816.0 61 9700.0 62 7739.0 63 5778.0 64 4383.5 65 2989.0 66 2315.0 67 1641.0 68 1375.5 69 1110.0 70 851.5 71 593.0 72 490.5 73 388.0 74 309.5 75 152.0 76 73.0 77 55.0 78 37.0 79 32.5 80 28.0 81 15.5 82 3.0 83 2.0 84 1.0 85 1.5 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1225408.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.76537754024854 #Duplication Level Percentage of deduplicated Percentage of total 1 74.19997518809876 33.95789877960414 2 12.9681299872864 11.869827297183612 3 4.558293350128105 6.2583604832345126 4 2.2365238928805757 4.094214413418637 5 1.2759313304564295 2.9196739526885054 6 0.8765903115920005 2.40704919348792 7 0.6114665210174477 1.9588797331310068 8 0.47660006100776986 1.744942538218086 9 0.36382269583224486 1.4985434729226323 >10 2.2471925256316694 18.390364273903803 >50 0.11018064488768871 3.483445260439768 >100 0.06709321155004055 5.709338878935492 >500 0.004659249790314175 1.5123289468517884 >1k 0.0029819198658010723 2.700288879836488 >5k 5.59109974837701E-4 1.4948438961437283 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGCT 6327 0.5163178304695253 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC 5870 0.4790241291063874 No Hit CCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC 5329 0.4348755679740951 No Hit GCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC 4724 0.3855042565414947 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4096 0.3342560192197211 No Hit CGCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTG 2390 0.1950370815271322 No Hit TCCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTG 2375 0.19381299942549746 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCC 2063 0.1683520917114953 No Hit TCTGTATCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC 1922 0.1568457199561289 No Hit CTGTCACTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGCT 1804 0.14721627408993576 Illumina Single End Adapter 2 (95% over 21bp) GCTGTATCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC 1792 0.14623700840862797 No Hit TTCCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCT 1714 0.13987178148012744 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1535 0.12526440173395312 No Hit CCTGTATCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC 1488 0.12142894448216432 No Hit TGCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTG 1294 0.10559748263435526 No Hit CGTTCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTC 1281 0.10453661147960516 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.160547344231472E-5 0.0 0.0 0.5518162114169322 0.0 2 8.160547344231472E-5 0.0 0.0 1.9830130046482477 0.0 3 8.160547344231472E-5 0.0 0.0 2.9067053585418083 0.0 4 8.160547344231472E-5 0.0 0.0 3.9717383924374574 0.0 5 8.160547344231472E-5 0.0 0.0 5.690268057659163 0.0 6 8.160547344231472E-5 0.0 0.0 6.95368399749308 0.0 7 8.160547344231472E-5 0.0 0.0 8.369130934350029 0.0 8 8.160547344231472E-5 0.0 0.0 10.575906147177104 0.0 9 8.160547344231472E-5 0.0 0.0 11.474300804303546 0.0 10 8.160547344231472E-5 0.0 0.0 13.50056470987622 0.0 11 8.160547344231472E-5 0.0 0.0 17.6621174335405 0.0 12 8.160547344231472E-5 0.0 0.0 20.7574130412075 0.0 13 8.160547344231472E-5 0.0 0.0 21.849049459445343 0.0 14 8.160547344231472E-5 0.0 0.0 22.181918185616546 0.0 15 8.160547344231472E-5 0.0 0.0 22.63393090301353 0.0 16 8.160547344231472E-5 0.0 0.0 23.887309369614037 0.0 17 8.160547344231472E-5 0.0 0.0 25.864609991121323 0.0 18 8.160547344231472E-5 0.0 0.0 27.942122134015772 0.0 19 8.160547344231472E-5 0.0 0.0 29.380908236277225 0.0 20 8.160547344231472E-5 0.0 0.0 30.702916906042724 0.0 21 8.160547344231472E-5 0.0 0.0 32.883904789262026 0.0 22 8.160547344231472E-5 0.0 0.0 35.15596438084295 0.0 23 8.160547344231472E-5 0.0 0.0 37.63065036298114 0.0 24 8.160547344231472E-5 0.0 0.0 39.28707826291325 0.0 25 8.160547344231472E-5 0.0 0.0 40.710522536167545 0.0 26 8.160547344231472E-5 0.0 0.0 41.942357157779284 0.0 27 8.160547344231472E-5 0.0 0.0 43.130124823732174 0.0 28 8.160547344231472E-5 0.0 0.0 44.419654515067634 0.0 29 8.160547344231472E-5 0.0 0.0 45.782873948921505 0.0 30 8.160547344231472E-5 0.0 0.0 47.11598096307515 0.0 31 8.160547344231472E-5 0.0 0.0 48.41864913563482 0.0 32 8.160547344231472E-5 0.0 0.0 49.56039131456625 0.0 33 8.160547344231472E-5 0.0 0.0 50.688260563012484 0.0 34 8.160547344231472E-5 0.0 0.0 51.7530487804878 0.0 35 8.160547344231472E-5 0.0 0.0 52.85921097299838 0.0 36 8.160547344231472E-5 0.0 0.0 53.92563129994255 0.0 37 8.160547344231472E-5 0.0 0.0 54.98617603279887 0.0 38 8.160547344231472E-5 0.0 0.0 55.99938959105865 0.0 39 8.160547344231472E-5 0.0 0.0 57.036431947563585 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATGCG 45 3.8562575E-10 45.000004 1 AATCCGG 20 7.0334703E-4 45.0 2 TCGTTGA 20 7.0334703E-4 45.0 24 TCGTTAT 20 7.0334703E-4 45.0 1 CAACGCT 20 7.0334703E-4 45.0 37 GCACGAT 20 7.0334703E-4 45.0 9 GTCTACG 40 6.8157533E-9 45.0 1 CGACATC 20 7.0334703E-4 45.0 29 AGGCGGC 20 7.0334703E-4 45.0 6 CCGTACG 20 7.0334703E-4 45.0 31 TACGAAT 80 0.0 45.0 12 TGCGAAG 20 7.0334703E-4 45.0 1 CTCGCAG 20 7.0334703E-4 45.0 1 GCGGCTA 40 6.8157533E-9 45.0 24 CTCGAAG 25 3.890957E-5 45.0 17 GCTACGA 80 0.0 45.0 10 CGCCGTA 20 7.0334703E-4 45.0 29 CGGTACC 20 7.0334703E-4 45.0 15 GCTCGGA 20 7.0334703E-4 45.0 19 AGGGCGC 40 6.8157533E-9 45.0 6 >>END_MODULE