##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934292.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1392512 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19921336405 33.0 31.0 34.0 30.0 34.0 2 32.37548832613292 34.0 31.0 34.0 30.0 34.0 3 32.35793731041456 34.0 31.0 34.0 30.0 34.0 4 35.94750996759812 37.0 35.0 37.0 35.0 37.0 5 35.06525904265098 37.0 35.0 37.0 35.0 37.0 6 25.81454378849159 36.0 0.0 37.0 0.0 37.0 7 30.954462869978858 37.0 19.0 37.0 17.0 37.0 8 34.64100201649968 37.0 32.0 37.0 32.0 37.0 9 37.24160868990716 39.0 37.0 39.0 34.0 39.0 10 37.28337565493152 39.0 37.0 39.0 34.0 39.0 11 37.34438985085946 39.0 37.0 39.0 34.0 39.0 12 37.25856366049269 39.0 37.0 39.0 34.0 39.0 13 37.338799234764224 39.0 37.0 39.0 34.0 39.0 14 38.57929123770567 40.0 38.0 41.0 34.0 41.0 15 38.64559156402243 40.0 38.0 41.0 35.0 41.0 16 38.70751275392959 40.0 38.0 41.0 35.0 41.0 17 38.668467488969576 40.0 38.0 41.0 35.0 41.0 18 38.60073593620737 40.0 38.0 41.0 35.0 41.0 19 38.542309868783896 40.0 37.0 41.0 35.0 41.0 20 38.41164384938873 40.0 37.0 41.0 34.0 41.0 21 38.31963027966725 40.0 37.0 41.0 34.0 41.0 22 38.31344002780587 40.0 37.0 41.0 34.0 41.0 23 38.22517579740785 40.0 37.0 41.0 34.0 41.0 24 38.16801506916996 40.0 37.0 41.0 34.0 41.0 25 38.04004992416582 40.0 36.0 41.0 34.0 41.0 26 37.99983195836014 40.0 36.0 41.0 34.0 41.0 27 37.96515721228973 40.0 36.0 41.0 34.0 41.0 28 37.91163235936207 40.0 36.0 41.0 34.0 41.0 29 37.86810813838588 40.0 36.0 41.0 34.0 41.0 30 37.62380719160768 40.0 36.0 41.0 33.0 41.0 31 37.56822346952845 40.0 36.0 41.0 33.0 41.0 32 37.269828913503076 40.0 36.0 41.0 33.0 41.0 33 37.06534449972424 40.0 36.0 41.0 32.0 41.0 34 36.832239147669824 40.0 36.0 41.0 31.0 41.0 35 36.62372101640776 39.0 35.0 41.0 30.0 41.0 36 36.5481252585256 39.0 35.0 41.0 30.0 41.0 37 36.50504627608236 39.0 35.0 41.0 30.0 41.0 38 36.39006988808714 39.0 35.0 41.0 30.0 41.0 39 36.37659280494531 39.0 35.0 41.0 30.0 41.0 40 36.28971886777277 39.0 35.0 41.0 30.0 41.0 41 36.11852249747219 39.0 35.0 41.0 29.0 41.0 42 36.01116471527714 39.0 35.0 41.0 29.0 41.0 43 36.06271974675981 39.0 35.0 41.0 29.0 41.0 44 36.0397246127861 39.0 35.0 41.0 29.0 41.0 45 36.04359028862947 39.0 35.0 41.0 29.0 41.0 46 35.945032430600236 39.0 35.0 41.0 28.0 41.0 47 35.808596263443334 39.0 35.0 40.0 28.0 41.0 48 35.76842713025094 39.0 35.0 40.0 27.0 41.0 49 35.75484520061587 39.0 35.0 40.0 27.0 41.0 50 35.67790367336152 39.0 35.0 40.0 27.0 41.0 51 34.72085267487821 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 3.0 10 12.0 11 4.0 12 5.0 13 5.0 14 3.0 15 17.0 16 30.0 17 76.0 18 228.0 19 476.0 20 966.0 21 1682.0 22 2854.0 23 5054.0 24 8519.0 25 14350.0 26 18581.0 27 18554.0 28 17569.0 29 17895.0 30 20210.0 31 25768.0 32 34492.0 33 50576.0 34 74884.0 35 106686.0 36 136865.0 37 224595.0 38 308274.0 39 303119.0 40 157.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.290419041272177 4.047864578545822 55.40842736005147 16.253289020130527 2 23.98169638753562 6.735956314918651 49.34248322456108 19.93986407298465 3 17.51029793639121 6.691073398290285 55.553129883261334 20.245498782057176 4 16.031818756319517 3.716161871495542 57.82872966265282 22.423289709532128 5 17.589004618990717 6.930784079419064 53.743235246805774 21.736976054784446 6 13.611947329717806 32.474477778288446 42.01356972148175 11.900005170511996 7 77.22561816343413 1.1642987636731317 16.915473618898798 4.694609453993933 8 78.46050877838037 3.0516792673959006 13.325271164629102 5.162540789594631 9 73.94514374023348 3.4615859683794463 15.06586657781046 7.527403713576615 10 34.91639569353801 26.38009582682232 23.89121242761283 14.812296052026841 11 22.211729593712658 24.303632571927565 32.40288054968288 21.0817572846769 12 19.25204235223826 21.027466908723227 37.697125769831786 22.023364969206728 13 19.97318515028955 22.580200386064895 39.47384295431565 17.972771509329903 14 18.628492968103686 26.25241290559794 35.696712128872136 19.422381997426232 15 16.067078775622758 25.115402955234856 39.4664462496553 19.351072019487084 16 17.02936850813494 25.702327879400684 35.15237211600331 22.115931496461073 17 17.788572019487084 26.153526863682323 33.70211531390753 22.355785802923062 18 18.10964645187977 24.754041616876552 35.67610189355639 21.46021003768729 19 18.4260530609431 27.719545684345988 33.19949846033643 20.654902794374483 20 19.35021026748782 27.349854076661455 34.52314953120691 18.77678612464381 21 19.29742795753286 29.09052130250942 33.91439355639305 17.697657183564665 22 18.79818629929221 24.20639822134387 33.18362786101664 23.811787618347275 23 17.93061747403254 27.230501424763304 31.9059368967736 22.932944204430555 24 19.155741566320433 25.523729777553083 32.67612774611637 22.644400910010113 25 17.355972515856237 29.47909964151117 30.19263029690229 22.972297545730306 26 17.464912331096606 28.37002481845758 31.789887627539297 22.375175222906517 27 19.143892476330546 27.610462243772403 31.267378665318503 21.978266614578544 28 16.33572996139351 26.09959555106168 33.63899197996139 23.925682507583417 29 18.039772727272727 25.54886421086497 32.50894785825903 23.902415203603272 30 21.81259479271992 26.744688735177867 30.928063815608052 20.51465265649416 31 21.429330591046973 27.494987475870946 28.226758548579834 22.84892338450225 32 19.538072203327513 30.570580361246435 28.817130480742716 21.074216954683333 33 21.9376206452799 26.116902403713578 28.84370116738671 23.101775783619818 34 20.746392131629747 26.63014753194227 29.236013765051933 23.387446571376046 35 19.71444411251034 27.321559886018935 29.747319951282286 23.216676050188436 36 21.97216253791709 27.21125563011306 29.57841655942642 21.238165272543434 37 20.649660469712288 27.07789950822686 31.080881170144316 21.191558851916536 38 19.23739256825076 27.575345849802375 30.133528472286052 23.053733109660815 39 21.857549522014892 26.779589691148082 30.704295546465666 20.658565240371356 40 23.909165594264177 24.549160079051383 31.17517120139719 20.36650312528725 41 21.033930048717714 25.167179887857337 31.388526633881792 22.410363429543157 42 19.5712496552992 24.8013661641695 33.64617324662193 21.981210933909367 43 19.979791915617245 24.543702316389375 32.779753424027945 22.696752343965436 44 19.95228766430738 25.387788399669088 29.021724767901464 25.63819916812207 45 21.129799958635903 24.59935713300855 27.701664330361247 26.5691785779943 46 23.98851859086313 25.315257606397644 28.57095665961945 22.12526714311977 47 19.416134295431565 25.099101479915433 32.716055588748965 22.768708635904037 48 19.458503768728743 25.16344562919386 31.522744507767257 23.855306094310137 49 20.905313562827466 22.80195790054233 33.304632204246715 22.988096332383492 50 21.481969275668718 21.98911032723596 31.221274933357847 25.307645463737476 51 20.069844999540397 21.38609936575053 29.511343528816987 29.032712105892085 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 166.0 1 401.5 2 637.0 3 12689.5 4 24742.0 5 16303.0 6 7864.0 7 7892.5 8 7921.0 9 8516.5 10 9112.0 11 9595.0 12 10078.0 13 9989.0 14 9900.0 15 9587.5 16 9275.0 17 8792.5 18 8310.0 19 8164.0 20 8018.0 21 7717.0 22 7416.0 23 7381.5 24 7347.0 25 8444.0 26 10517.5 27 11494.0 28 13398.5 29 15303.0 30 17228.0 31 19153.0 32 23242.5 33 27332.0 34 31211.5 35 35091.0 36 39076.5 37 43062.0 38 47855.0 39 52648.0 40 60277.0 41 67906.0 42 78773.0 43 89640.0 44 103761.0 45 117882.0 46 154328.5 47 190775.0 48 189912.0 49 189049.0 50 172425.5 51 155802.0 52 126663.5 53 97525.0 54 79269.0 55 61013.0 56 48934.5 57 36856.0 58 30824.0 59 24792.0 60 20229.0 61 15666.0 62 12744.5 63 9823.0 64 7736.5 65 5650.0 66 4272.0 67 2894.0 68 2154.5 69 1415.0 70 986.5 71 558.0 72 487.0 73 416.0 74 300.5 75 139.0 76 93.0 77 95.0 78 97.0 79 65.0 80 33.0 81 22.5 82 12.0 83 9.0 84 6.0 85 9.5 86 13.0 87 7.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1392512.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.62227574785929 #Duplication Level Percentage of deduplicated Percentage of total 1 74.82101902392436 31.8904210457353 2 11.62451790570935 9.909268152261433 3 4.238516920490742 5.4196571084137135 4 2.1480819519573426 3.662245651413027 5 1.3273740216269927 2.828785078516531 6 0.9380223390505615 2.3988388075598994 7 0.6785105688441853 2.024376519417961 8 0.5410546571741728 1.8448784634192854 9 0.44644300435049733 1.7125575153416677 >10 3.0635879587536454 23.031717509119133 >50 0.1091370522348368 3.193894806738294 >100 0.055358051982722006 4.251731270002191 >500 0.0032777780480549067 0.8997865717851626 >1k 0.004188271950292381 3.6859970741524335 >5k 7.283951217899793E-4 2.293745584056492 >10k+ 1.8209878044749483E-4 0.9520988420675053 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12267 0.8809259812482765 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGC 9105 0.6538543294420442 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCG 7926 0.5691871955142936 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTC 6964 0.5001034102399118 No Hit CTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTGCT 5558 0.3991348009927383 TruSeq Adapter, Index 21 (95% over 23bp) CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4666 0.33507790238073354 No Hit CCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTGC 4128 0.2964426877470355 TruSeq Adapter, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTGC 4127 0.2963708750804302 TruSeq Adapter, Index 14 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTGC 3760 0.2700156264362533 TruSeq Adapter, Index 14 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTG 2855 0.20502516315837852 TruSeq Adapter, Index 21 (95% over 21bp) GAATCAGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTC 2368 0.1700523945215553 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCT 2128 0.15281735453626252 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTC 2122 0.1523864785366302 No Hit CTGTCACTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTGCT 1746 0.12538491589300485 TruSeq Adapter, Index 21 (95% over 23bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCC 1738 0.12481041456016179 No Hit TCCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTG 1590 0.11418213990256458 TruSeq Adapter, Index 21 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCT 1563 0.11224319790421915 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGCAGGTTT 1533 0.11008881790605754 No Hit CGTTCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTC 1470 0.1055646199099182 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTA 1452 0.10427199191102123 No Hit TCTGTATCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTGC 1413 0.10147129791341115 TruSeq Adapter, Index 21 (95% over 22bp) GCTGTATCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTGC 1408 0.10111223458038424 TruSeq Adapter, Index 21 (95% over 22bp) CGTTTTCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCT 1396 0.10025048258111958 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.44365865428807794 0.0 2 0.0 0.0 0.0 1.4349607041088335 0.0 3 0.0 0.0 0.0 2.1101433955326776 0.0 4 0.0 0.0 0.0 2.990279437448295 0.0 5 0.0 0.0 0.0 4.740066871955143 0.0 6 0.0 0.0 0.0 5.8976870576339735 0.0 7 0.0 0.0 0.0 7.281660768452983 0.0 8 0.0 0.0 0.0 9.209112740141558 0.0 9 0.0 0.0 0.0 10.0642579740785 0.0 10 0.0 0.0 0.0 12.090883238349113 0.0 11 0.0 0.0 0.0 14.858830659987131 0.0 12 0.0 0.0 0.0 17.95769084934277 0.0 13 0.0 0.0 0.0 18.86425395256917 0.0 14 0.0 0.0 0.0 19.210247380273923 0.0 15 0.0 0.0 0.0 19.684857293868923 0.0 16 0.0 0.0 0.0 20.53928440113981 0.0 17 0.0 0.0 0.0 21.852307197352697 0.0 18 0.0 0.0 0.0 23.20432427153231 0.0 19 0.0 0.0 0.0 24.36072364187885 0.0 20 0.0 0.0 0.0 25.345562551705118 0.0 21 0.0 0.0 0.0 26.744329671844838 0.0 22 0.0 0.0 0.0 28.276237475870943 0.0 23 0.0 0.0 0.0 29.77906114992187 0.0 24 0.0 0.0 0.0 30.86644854766063 0.0 25 0.0 0.0 0.0 31.80848710819009 0.0 26 0.0 0.0 0.0 32.630024014155715 0.0 27 0.0 0.0 0.0 33.45536699145142 0.0 28 0.0 0.0 0.0 34.33923729203052 0.0 29 0.0 0.0 0.0 35.246949397922606 0.0 30 0.0 0.0 0.0 36.193799407114625 0.0 31 0.0 0.0 0.0 37.10050613567424 0.0 32 0.0 0.0 0.0 37.96771589760088 0.0 33 0.0 0.0 0.0 38.80282539755492 0.0 34 0.0 0.0 0.0 39.592118416214724 0.0 35 0.0 0.0 0.0 40.4464018981524 0.0 36 0.0 0.0 0.0 41.25185276679842 0.0 37 0.0 0.0 0.0 42.06628021877011 0.0 38 0.0 0.0 0.0 42.88752987406931 0.0 39 0.0 0.0 0.0 43.70518889603824 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACGA 25 3.8912312E-5 45.000004 8 AGATCGC 25 3.8912312E-5 45.000004 12 ACTTGCG 45 3.8562575E-10 45.000004 1 GCGTTAG 90 0.0 45.000004 1 CCGCTAG 35 1.2121745E-7 45.000004 1 ATCGCAC 25 3.8912312E-5 45.000004 14 CGAACGA 20 7.0338015E-4 45.0 22 TTGTACG 40 6.8175723E-9 45.0 1 TATGCGA 20 7.0338015E-4 45.0 26 CGAGACG 20 7.0338015E-4 45.0 33 AGCTACG 55 1.8189894E-12 45.0 9 CCGTTCG 20 7.0338015E-4 45.0 1 GCCGTCG 20 7.0338015E-4 45.0 1 ACGAACG 20 7.0338015E-4 45.0 21 CGTTTAT 2820 0.0 44.840427 1 CGTTTTT 6545 0.0 44.2437 1 TAGGGCG 515 0.0 42.815533 5 CCGTAGG 80 0.0 42.1875 2 AGGCGAT 75 0.0 42.0 6 ATCCGGC 75 0.0 42.0 6 >>END_MODULE