##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934289.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 827856 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.14452755068514 33.0 31.0 34.0 30.0 34.0 2 32.30854882974817 34.0 31.0 34.0 30.0 34.0 3 32.35722637753426 34.0 31.0 34.0 30.0 34.0 4 35.91620160994182 37.0 35.0 37.0 35.0 37.0 5 35.1132455402872 37.0 35.0 37.0 35.0 37.0 6 26.433070485688333 36.0 0.0 37.0 0.0 37.0 7 31.25599983572022 37.0 19.0 37.0 17.0 37.0 8 34.730002560831835 37.0 32.0 37.0 32.0 37.0 9 37.225269853694364 39.0 37.0 39.0 34.0 39.0 10 37.20995680408187 39.0 37.0 39.0 34.0 39.0 11 37.25429301714308 39.0 37.0 39.0 34.0 39.0 12 37.121850901606074 39.0 37.0 39.0 34.0 39.0 13 37.13943125374461 39.0 37.0 39.0 33.0 39.0 14 38.29353172532421 40.0 38.0 41.0 34.0 41.0 15 38.37912632148586 40.0 38.0 41.0 34.0 41.0 16 38.437978344059836 40.0 38.0 41.0 34.0 41.0 17 38.44130138574825 40.0 38.0 41.0 34.0 41.0 18 38.42975710751628 40.0 38.0 41.0 34.0 41.0 19 38.43443908119286 40.0 37.0 41.0 34.0 41.0 20 38.35491558918459 40.0 37.0 41.0 34.0 41.0 21 38.255253329081384 40.0 37.0 41.0 34.0 41.0 22 38.2600355617402 40.0 37.0 41.0 34.0 41.0 23 38.21537924469956 40.0 37.0 41.0 34.0 41.0 24 38.16711118841924 40.0 37.0 41.0 34.0 41.0 25 38.067221835681565 40.0 37.0 41.0 34.0 41.0 26 38.003432964187006 40.0 37.0 41.0 34.0 41.0 27 37.933004049013356 40.0 37.0 41.0 34.0 41.0 28 37.90055637695445 40.0 37.0 41.0 34.0 41.0 29 37.8893853520419 40.0 36.0 41.0 34.0 41.0 30 37.54619402408148 39.0 36.0 41.0 33.0 41.0 31 37.58353022747917 39.0 36.0 41.0 33.0 41.0 32 37.46871557372297 39.0 36.0 41.0 33.0 41.0 33 37.302883593281926 39.0 36.0 41.0 33.0 41.0 34 37.32592624804314 39.0 36.0 41.0 33.0 41.0 35 37.257770675093255 39.0 36.0 41.0 32.0 41.0 36 37.070575075858606 39.0 35.0 41.0 32.0 41.0 37 37.00193391121161 39.0 35.0 41.0 31.0 41.0 38 36.94525980363735 39.0 35.0 41.0 31.0 41.0 39 36.885773612802225 39.0 35.0 41.0 31.0 41.0 40 36.86876944782667 39.0 35.0 41.0 31.0 41.0 41 36.80381974642933 39.0 35.0 41.0 31.0 41.0 42 36.731943719680714 39.0 35.0 40.0 31.0 41.0 43 36.6541620764964 39.0 35.0 40.0 31.0 41.0 44 36.538500657119116 39.0 35.0 40.0 31.0 41.0 45 36.53323524864228 39.0 35.0 40.0 31.0 41.0 46 36.39021037475116 39.0 35.0 40.0 30.0 41.0 47 36.26881728223266 39.0 35.0 40.0 30.0 41.0 48 36.25467834985795 39.0 35.0 40.0 30.0 41.0 49 36.253425716549735 39.0 35.0 40.0 30.0 41.0 50 36.15668063044781 39.0 35.0 40.0 30.0 41.0 51 35.06128360487814 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 12.0 11 4.0 12 2.0 13 3.0 14 6.0 15 8.0 16 30.0 17 47.0 18 92.0 19 202.0 20 406.0 21 651.0 22 1058.0 23 1756.0 24 2959.0 25 4765.0 26 6224.0 27 7256.0 28 8002.0 29 9392.0 30 11969.0 31 15878.0 32 22459.0 33 34153.0 34 50643.0 35 69166.0 36 85858.0 37 141166.0 38 188535.0 39 165081.0 40 69.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.19406273554821 4.783561392319437 56.032812469801506 14.989563402330841 2 20.828501575153165 4.765925474961829 52.72438684988694 21.68118609999807 3 19.134728745095767 4.724855530430413 53.43598403587097 22.70443168860285 4 18.794572969212037 4.099142846098839 53.675035271834716 23.43124891285441 5 16.705199938153495 7.398388125471096 51.80345374074719 24.092958195628224 6 14.549390232117663 29.936124156858195 42.200092769757056 13.31439284126708 7 78.91348253802593 1.6436433389381728 13.429388685955047 6.013485437080845 8 79.91377727527492 1.845006861096616 11.056149861811717 7.1850660018167405 9 74.58664308768674 4.0058899132216235 14.274704779575192 7.1327622195164375 10 36.79069789915154 24.671923619566687 22.268969482615333 16.268408998666434 11 24.200827197000443 26.323780947411144 28.436104829825474 21.039287025762935 12 22.772197097079687 22.529159660617307 33.305671517751875 21.39297172455113 13 22.027623161516015 26.130389826249978 33.76215187182312 18.079835140410893 14 19.238249164105838 27.997260393111844 31.516713051545196 21.247777391237125 15 16.574863261243504 26.917724821708124 35.10997081618059 21.397441100867784 16 16.764388975860538 26.771926518621598 32.45141667149842 24.012267834019443 17 17.399282000734427 26.690149011422275 29.63667594364237 26.273893044200925 18 18.784063895170174 24.702846871919753 33.83378268684409 22.679306546065984 19 19.541562783865793 27.28687114667285 31.105047254595004 22.066518814866352 20 20.769916507218646 27.929132602771496 31.171000753754274 20.12995013625558 21 20.346171314818037 28.704750584642742 31.4443574727972 19.504720627742024 22 19.143305115865562 26.20806033899615 29.63136100964419 25.017273535494095 23 17.843562165400744 26.757914419899116 28.761402949305193 26.637120465394947 24 19.833400977947854 25.433287914806442 29.82100751821573 24.912303589029978 25 18.440405094605826 27.164627664714637 27.23227227923697 27.16269496144257 26 19.09136371542877 27.101694014417966 29.849031715660697 23.957910554492567 27 19.85272801066852 25.79868962718154 32.039871668502734 22.308710693647203 28 19.4809242187047 23.692647030401425 32.48113198430645 24.345296766587428 29 21.838339034807987 22.025207282425928 31.53048356235867 24.605970120407413 30 22.009141686476873 25.97130418816799 30.231827757484393 21.78772636787074 31 22.235388763263174 28.590358709727298 26.003918555884116 23.170333971125412 32 21.86853752343403 31.36221758373437 24.35000773081309 22.419237162018515 33 20.08960495545119 30.059937960224964 26.329337469318336 23.52111961500551 34 19.769500976015152 26.44107187723469 27.007474729904718 26.78195241684544 35 21.074438066523644 26.476464505904406 26.09886260412439 26.350234823447554 36 22.42769273883381 28.252498018979143 28.291031290465973 21.02877795172107 37 21.041340522989504 26.988630873002066 30.312034943275158 21.65799366073327 38 21.676475135772407 29.75118861251232 26.410873388608646 22.161462863106625 39 21.4298138806749 28.705354554415262 27.82222995303531 22.04260161187453 40 20.701184747105778 27.206059991109566 26.780382095436888 25.31237316634777 41 17.925098084691058 28.761644537214202 25.577515896484414 27.735741481610326 42 21.055835797530005 28.597968728861055 26.48105467617557 23.86514079743337 43 23.10993699387333 25.548283759494407 28.692429601283315 22.64934964534895 44 22.049849249144778 23.637927369011035 27.149528420401616 27.16269496144257 45 23.760291644923758 22.66444888966197 25.39125161863899 28.184007846775284 46 23.77237104037417 23.692647030401425 29.193120542703078 23.34186138652133 47 19.333434800255116 25.93144218318162 30.83640149977774 23.89872151678553 48 19.947913646817806 24.633269554125356 30.742423803173498 24.676392995883344 49 23.355873485243812 22.784880462302624 31.255435727952687 22.603810324500877 50 22.331540751048493 21.90368856419474 28.015017104423954 27.749753580332808 51 19.697386985176166 22.706364391874914 25.425919483581687 32.17032913936723 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 134.0 1 299.5 2 465.0 3 3209.5 4 5954.0 5 3932.0 6 1910.0 7 1983.5 8 2057.0 9 2290.0 10 2523.0 11 2687.0 12 2851.0 13 2919.0 14 2987.0 15 2851.0 16 2715.0 17 2663.0 18 2611.0 19 2547.0 20 2483.0 21 2714.0 22 2945.0 23 3049.0 24 3153.0 25 3506.0 26 4552.0 27 5245.0 28 6001.0 29 6757.0 30 7929.5 31 9102.0 32 10957.5 33 12813.0 34 15381.0 35 17949.0 36 19971.0 37 21993.0 38 24975.0 39 27957.0 40 33740.0 41 39523.0 42 45479.0 43 51435.0 44 60385.0 45 69335.0 46 87188.0 47 105041.0 48 120143.0 49 135245.0 50 123606.0 51 111967.0 52 89757.5 53 67548.0 54 53234.5 55 38921.0 56 31318.0 57 23715.0 58 19646.5 59 15578.0 60 13079.5 61 10581.0 62 9049.5 63 7518.0 64 6141.0 65 4764.0 66 4020.0 67 3276.0 68 2575.5 69 1875.0 70 1572.0 71 1269.0 72 996.0 73 723.0 74 614.0 75 392.0 76 279.0 77 230.5 78 182.0 79 127.5 80 73.0 81 51.0 82 29.0 83 18.0 84 7.0 85 4.5 86 2.0 87 1.5 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 827856.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.377853132426964 #Duplication Level Percentage of deduplicated Percentage of total 1 72.0816517973469 29.825840016133597 2 12.955569431155139 10.721472983385954 3 4.891821155413161 6.07239171956355 4 2.4872171514353525 4.116628240021815 5 1.4624737605865907 3.0257012237790053 6 0.9610972536631013 2.386088460483043 7 0.7273728488689742 2.1067988839110785 8 0.5684308567256516 1.8816358804426916 9 0.4492390957081156 1.672969439119924 >10 3.228023317364233 24.20747248595351 >50 0.11637288976028544 3.284131709314062 >100 0.06196470343745961 4.71144459615427 >500 0.003929468998459251 1.0947511162743833 >1k 0.004231735844494579 3.330905030117602 >5k 6.04533692070654E-4 1.5617682153453927 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGCT 6389 0.7717525753271101 No Hit CCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 6098 0.736601534566398 No Hit TCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 4668 0.5638661796254422 No Hit GCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 3777 0.4562387661622311 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2970 0.35875804487736995 No Hit CTGTCACTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGCT 2002 0.24182949691733827 No Hit CCTGTATCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 1796 0.21694594228948028 No Hit TCCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTG 1675 0.2023298737944763 No Hit CGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTG 1562 0.1886801569355057 No Hit TCTGTATCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 1468 0.1773255252121142 No Hit GCTGTATCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC 1280 0.15461626176533116 No Hit TTCCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCT 1199 0.1448319514504938 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCC 1152 0.13915463558879806 No Hit TGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTG 1058 0.12780000386540655 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1022 0.12345142150325661 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGC 1003 0.12115633636767748 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTC 931 0.11245917164337758 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCG 929 0.11221758373436927 No Hit GCCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTG 904 0.10919773487176514 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.8213988906283218 0.0 2 0.0 0.0 0.0 2.758933920875128 0.0 3 0.0 0.0 0.0 3.8054927426992133 0.0 4 0.0 0.0 0.0 4.94808275835411 0.0 5 0.0 0.0 0.0 6.832106066755571 0.0 6 0.0 0.0 0.0 7.9624958930055465 0.0 7 0.0 0.0 0.0 9.289900659051815 0.0 8 0.0 0.0 0.0 11.38893720647069 0.0 9 0.0 0.0 0.0 12.209490539417484 0.0 10 0.0 0.0 0.0 14.106680388859898 0.0 11 0.0 0.0 0.0 18.019921338976825 0.0 12 0.0 0.0 0.0 21.142565856863996 0.0 13 0.0 0.0 0.0 22.162912390560678 0.0 14 0.0 0.0 0.0 22.472507295954852 0.0 15 0.0 0.0 0.0 22.94287895479407 0.0 16 0.0 0.0 0.0 24.225227575810287 0.0 17 0.0 0.0 0.0 26.11166676330183 0.0 18 0.0 0.0 0.0 28.05185926054773 0.0 19 0.0 0.0 0.0 29.368392570688624 0.0 20 0.0 0.0 0.0 30.6641493206548 0.0 21 0.0 0.0 0.0 32.653746545292904 0.0 22 0.0 0.0 0.0 34.699029782957425 0.0 23 0.0 0.0 0.0 36.861845538354494 0.0 24 0.0 0.0 0.0 38.38227904369842 0.0 25 0.0 0.0 0.0 39.701107438974894 0.0 26 0.0 0.0 0.0 40.82412883400011 0.0 27 0.0 0.0 0.0 41.972637753425715 0.0 28 0.0 0.0 0.0 43.11945555748826 0.0 29 0.0 0.0 0.0 44.3301733634835 0.0 30 0.0 0.0 0.0 45.592107806188515 0.0 31 0.0 0.0 0.0 46.774197444966276 0.0 32 0.0 0.0 0.0 47.82305135192594 0.0 33 0.0 0.0 0.0 48.874079550066675 0.0 34 0.0 0.0 0.0 49.843451034962605 0.0 35 0.0 0.0 0.0 50.87152838174755 0.0 36 0.0 0.0 0.0 51.826404592102975 0.0 37 0.0 0.0 0.0 52.750599138014344 0.0 38 0.0 0.0 0.0 53.67274018669914 0.0 39 0.0 0.0 0.0 54.57277594170967 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAATCG 20 7.0321414E-4 45.000004 20 GATCGCG 20 7.0321414E-4 45.000004 10 CGGCCAC 70 0.0 45.000004 6 CGTCTAC 20 7.0321414E-4 45.000004 20 TGACGCC 20 7.0321414E-4 45.000004 32 CTGCGCG 75 0.0 45.000004 1 CGTAGTT 20 7.0321414E-4 45.000004 24 TATAGCG 20 7.0321414E-4 45.000004 1 CCACGGT 20 7.0321414E-4 45.000004 37 TCGACCC 20 7.0321414E-4 45.000004 26 GAGATCG 20 7.0321414E-4 45.000004 9 ATAGCGG 25 3.889857E-5 45.0 2 TGTGCGA 25 3.889857E-5 45.0 17 CGTTCAT 25 3.889857E-5 45.0 17 GCGATAC 25 3.889857E-5 45.0 9 CCGAATC 50 2.1827873E-11 45.0 26 CTCGTAG 30 2.164763E-6 44.999996 1 CATGACG 30 2.164763E-6 44.999996 19 ACTTACG 30 2.164763E-6 44.999996 27 AACGCAT 30 2.164763E-6 44.999996 38 >>END_MODULE