##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934288.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 843764 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.365592748683284 33.0 31.0 34.0 31.0 34.0 2 32.531319184037244 34.0 31.0 34.0 31.0 34.0 3 32.60059329385942 34.0 31.0 34.0 31.0 34.0 4 36.06403804855386 37.0 35.0 37.0 35.0 37.0 5 35.21188626203536 37.0 35.0 37.0 35.0 37.0 6 26.430621595612042 37.0 0.0 37.0 0.0 37.0 7 31.277658207745294 37.0 19.0 37.0 17.0 37.0 8 34.82252975950621 37.0 32.0 37.0 32.0 37.0 9 37.31831886641288 39.0 37.0 39.0 35.0 39.0 10 37.373983720566414 39.0 37.0 39.0 34.0 39.0 11 37.42941509711246 39.0 37.0 39.0 35.0 39.0 12 37.07334870888068 39.0 37.0 39.0 34.0 39.0 13 37.01327503899194 39.0 37.0 39.0 33.0 39.0 14 37.95634205773178 40.0 37.0 41.0 33.0 41.0 15 38.1708404245737 40.0 37.0 41.0 33.0 41.0 16 38.30614247585818 40.0 37.0 41.0 34.0 41.0 17 38.33495977548225 40.0 37.0 41.0 34.0 41.0 18 38.349427090987525 40.0 37.0 41.0 34.0 41.0 19 38.36871210433249 40.0 37.0 41.0 34.0 41.0 20 38.272204076021254 40.0 37.0 41.0 34.0 41.0 21 38.17469576801096 40.0 37.0 41.0 34.0 41.0 22 38.22002716399372 40.0 37.0 41.0 34.0 41.0 23 38.17583115657933 40.0 36.0 41.0 34.0 41.0 24 38.126725008414674 40.0 36.0 41.0 34.0 41.0 25 38.00213685343295 40.0 36.0 41.0 34.0 41.0 26 37.98188000436141 40.0 36.0 41.0 34.0 41.0 27 37.95393498656022 40.0 36.0 41.0 34.0 41.0 28 37.86112704500311 40.0 36.0 41.0 34.0 41.0 29 37.85087180775667 40.0 36.0 41.0 34.0 41.0 30 37.56614645801432 40.0 35.0 41.0 33.0 41.0 31 37.52419752442626 40.0 35.0 41.0 33.0 41.0 32 37.51125433177997 40.0 35.0 41.0 33.0 41.0 33 37.46477214007708 40.0 35.0 41.0 33.0 41.0 34 37.35764976936679 40.0 35.0 41.0 33.0 41.0 35 37.35236393114663 40.0 35.0 41.0 33.0 41.0 36 37.25472051426702 40.0 35.0 41.0 32.0 41.0 37 37.13774467742165 39.0 35.0 41.0 32.0 41.0 38 37.0568180202047 39.0 35.0 41.0 32.0 41.0 39 36.996455169929035 39.0 35.0 41.0 32.0 41.0 40 36.87135028278049 39.0 35.0 41.0 31.0 41.0 41 36.78540681991647 39.0 35.0 41.0 31.0 41.0 42 36.797513285705485 39.0 35.0 41.0 31.0 41.0 43 36.73147586291901 39.0 35.0 41.0 31.0 41.0 44 36.58728625539843 39.0 35.0 41.0 31.0 41.0 45 36.51860946899844 39.0 35.0 41.0 31.0 41.0 46 36.41415016521207 39.0 35.0 40.0 31.0 41.0 47 36.315046624411565 38.0 35.0 40.0 31.0 41.0 48 36.271321127708696 38.0 35.0 40.0 31.0 41.0 49 36.209203047297585 38.0 35.0 40.0 31.0 41.0 50 36.0406144372123 38.0 35.0 40.0 30.0 41.0 51 34.965172726022914 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 10.0 10 9.0 11 5.0 12 10.0 13 12.0 14 11.0 15 20.0 16 46.0 17 79.0 18 154.0 19 249.0 20 483.0 21 787.0 22 1202.0 23 1937.0 24 2876.0 25 4114.0 26 5441.0 27 6675.0 28 7816.0 29 9596.0 30 12618.0 31 16708.0 32 24337.0 33 40263.0 34 59645.0 35 69421.0 36 77250.0 37 128994.0 38 181197.0 39 191679.0 40 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.688979382860612 4.426593218008827 51.43570951119033 17.44871788794023 2 19.717480243290776 4.604960628801418 52.732873173067354 22.944685954840452 3 21.521420681612394 4.754647034004769 51.637306166179165 22.086626118203668 4 19.84097449049734 4.816868223816138 51.13432191939926 24.207835366287256 5 18.264585832057307 8.126442939020864 50.23762568680342 23.371345542118412 6 16.42141641501652 30.548707932549863 39.60076514285985 13.429110509573766 7 84.19830663550472 2.2288222773192503 9.384614655282757 4.188256431893278 8 85.98044002825435 2.3738865369937563 7.114074551651884 4.531598883100014 9 81.1493498181956 4.528398936195429 9.36612607316738 4.956125172441583 10 41.84665380367022 23.604467599945007 18.70499333936978 15.843885257014994 11 33.08389549684509 24.362143917019452 23.438188877458625 19.115771708676835 12 28.809596048184087 22.2466234634329 29.25758861482595 19.68619187355706 13 25.78540919024751 24.018090366500587 31.004996657833235 19.19150378541867 14 21.22453671879815 24.991703841358483 33.20584902887537 20.577910410967995 15 19.77768665171778 23.23564409005362 35.80633921333454 21.18033004489407 16 23.882862980643875 23.284591426038563 30.882806092698907 21.949739500618655 17 24.439061159281504 23.851337577806117 27.57014994714162 24.13945131577076 18 25.579664455937916 22.657875898948046 30.843221564323674 20.919238080790365 19 25.96662099828862 24.509104441526304 27.691510896411792 21.83276366377328 20 25.18701911909017 27.760487529688398 28.137251648565236 18.915241702656193 21 24.15011780545271 26.720860335354434 30.36607392588449 18.762947933308364 22 22.863146567049554 22.75351875642952 30.67741690804538 23.705917768475544 23 21.16030074760241 25.433296514191174 29.959917702106274 23.446485036100142 24 22.337644175385535 25.781024077822707 30.017161196732733 21.86417055005902 25 23.438070360906604 26.343029567509397 26.2012837712915 24.0176163002925 26 22.170061770826912 25.41753381277229 27.19314879516073 25.219255621240062 27 22.681105143144293 24.867261461735744 30.316771040243477 22.134862354876482 28 18.880990419121936 25.909496020214185 29.715892121493688 25.493621439170195 29 21.511583807794597 25.63797459953257 28.6471098553624 24.20333173731043 30 24.373521506013528 25.506065677132465 28.51733423089869 21.603078585955316 31 23.488202862411764 27.693881227452227 27.39083440393285 21.427081506203155 32 24.583769869299946 26.2056688837163 26.52827093831925 22.682290308664506 33 24.39995069711436 25.450718447338357 25.764076210883612 24.38525464466367 34 20.29927799716508 26.182439639520055 29.755950716077006 23.762331647237854 35 21.817119478906424 26.294911847388608 27.688903532267318 24.199065141437654 36 25.466007082549147 27.20950407933972 25.663337141665206 21.661151696445927 37 21.3944894543972 29.123309361385413 26.519026647261555 22.96317453695583 38 20.91473445181354 28.193784043879567 26.906220222716303 23.985261281590585 39 20.38069886840396 26.65330590070209 26.728800944339888 26.23719428655406 40 23.282102578446107 25.87583731944003 27.868930174788208 22.97312992732565 41 20.86104645374773 24.768181624245642 26.95896008836594 27.411811833640687 42 21.560412627227517 23.467462465807976 29.10102824960534 25.871096657359168 43 21.996435022115186 23.535846516324472 28.32154488695891 26.146173574601427 44 22.32508142087124 24.010149757515133 27.749584006902406 25.915184814711225 45 21.76272038152848 24.42223180889443 25.938888125115554 27.876159684461534 46 22.170891386691068 24.60142883555117 28.33683352216971 24.890846255588055 47 19.669836589378072 25.884014961529527 30.541596939428562 23.90455150966384 48 20.078244627644697 26.568922115662673 28.797151810221816 24.555681446470814 49 22.53734456554202 24.346025665944506 29.152227400078694 23.964402368434776 50 21.440829426237666 25.15253080245187 26.531826434879896 26.874813336430563 51 19.69993979359157 25.421800408645073 25.898355464324148 28.97990433343921 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 158.0 1 530.5 2 903.0 3 2218.0 4 3533.0 5 2411.0 6 1289.0 7 1325.0 8 1361.0 9 1444.0 10 1527.0 11 1565.0 12 1603.0 13 1658.0 14 1713.0 15 1650.0 16 1587.0 17 1461.5 18 1336.0 19 1517.0 20 1698.0 21 1891.0 22 2084.0 23 2411.5 24 2739.0 25 3576.5 26 5130.0 27 5846.0 28 7038.5 29 8231.0 30 10199.5 31 12168.0 32 13735.5 33 15303.0 34 17994.5 35 20686.0 36 22658.0 37 24630.0 38 28092.0 39 31554.0 40 35800.5 41 40047.0 42 43039.5 43 46032.0 44 51594.5 45 57157.0 46 66075.5 47 74994.0 48 85220.5 49 95447.0 50 92458.0 51 89469.0 52 79330.0 53 69191.0 54 62705.5 55 56220.0 56 51335.0 57 46450.0 58 41681.0 59 36912.0 60 31614.0 61 26316.0 62 22979.0 63 19642.0 64 16767.5 65 13893.0 66 11753.0 67 9613.0 68 8130.5 69 6648.0 70 5537.5 71 4427.0 72 3594.0 73 2761.0 74 2394.0 75 1728.0 76 1429.0 77 981.0 78 533.0 79 321.0 80 109.0 81 75.5 82 42.0 83 29.5 84 17.0 85 15.5 86 14.0 87 10.5 88 7.0 89 5.0 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 843764.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.39002470661901 #Duplication Level Percentage of deduplicated Percentage of total 1 71.35267759640337 24.538203454237326 2 10.882563943142221 7.485032857520444 3 4.060945006081866 4.1896799727412946 4 2.178487257815331 2.996729224772958 5 1.4525937153898862 2.4977366880468845 6 1.1207782584567905 2.3126155199382272 7 0.9034378973530722 2.174847612760766 8 0.7372836574823584 2.0284162557283785 9 0.6695710200146672 2.072390752902645 >10 6.484399504351002 42.54460075922485 >50 0.10932080152115765 2.5556162605779567 >100 0.04249346221692023 2.3851250266129975 >500 0.003268727862839838 0.7006991725648537 >1k 0.002179151908559892 1.5183064423704744 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGGACAATCTCGTATGCCGTCTTCTGC 3357 0.39786006513669697 RNA PCR Primer, Index 36 (96% over 25bp) CTGTCTCTTATACACATCTGACGCGGACAATCTCGTATGCCGTCTTCTGCT 2407 0.2852693407161244 RNA PCR Primer, Index 36 (96% over 26bp) GCTGTCTCTTATACACATCTGACGCGGACAATCTCGTATGCCGTCTTCTGC 2031 0.240707117155982 RNA PCR Primer, Index 15 (96% over 25bp) TCTGTCTCTTATACACATCTGACGCGGACAATCTCGTATGCCGTCTTCTGC 1806 0.21404089295110956 RNA PCR Primer, Index 15 (96% over 25bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1465 0.17362674871172507 No Hit CCTGTATCTTATACACATCTGACGCGGACAATCTCGTATGCCGTCTTCTGC 1090 0.1291830417036043 RNA PCR Primer, Index 36 (96% over 25bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.30861710146439053 0.0 2 0.0 0.0 0.0 1.2459645114036626 0.0 3 0.0 0.0 0.0 1.7247713815711503 0.0 4 0.0 0.0 0.0 2.2039338013947027 0.0 5 0.0 0.0 0.0 3.0104389379020673 0.0 6 0.0 0.0 0.0 3.5285933033407444 0.0 7 0.0 0.0 0.0 4.199159954679271 0.0 8 0.0 0.0 0.0 5.259646062169042 0.0 9 0.0 0.0 0.0 5.738926998544617 0.0 10 0.0 0.0 0.0 6.755799014890419 0.0 11 0.0 0.0 0.0 8.556895055963516 0.0 12 0.0 0.0 0.0 10.065492246647167 0.0 13 0.0 0.0 0.0 10.589335406582883 0.0 14 0.0 0.0 0.0 10.780739638097856 0.0 15 0.0 0.0 0.0 11.058186886380552 0.0 16 0.0 0.0 0.0 11.730412769447382 0.0 17 0.0 0.0 0.0 12.631375597916005 0.0 18 0.0 0.0 0.0 13.59681143068441 0.0 19 0.0 0.0 0.0 14.243437738514562 0.0 20 0.0 0.0 0.0 14.97717371208063 0.0 21 0.0 0.0 0.0 15.975201596654989 0.0 22 0.0 0.0 0.0 17.00617708269137 0.0 23 0.0 0.0 0.0 18.01641217212396 0.0 24 0.0 0.0 0.0 18.816280381718112 0.0 25 0.0 0.0 0.0 19.49858017170678 0.0 26 1.1851655202165534E-4 0.0 0.0 20.11356256014715 0.0 27 2.370331040433107E-4 0.0 0.0 20.81660274673961 0.0 28 2.370331040433107E-4 0.0 0.0 21.48159912013312 0.0 29 2.370331040433107E-4 0.0 0.0 22.226001583381134 0.0 30 2.370331040433107E-4 0.0 0.0 23.08892059865081 0.0 31 2.370331040433107E-4 0.0 0.0 23.753916972044316 0.0 32 2.370331040433107E-4 0.0 0.0 24.401609928842664 0.0 33 2.370331040433107E-4 0.0 0.0 25.040295627687364 0.0 34 2.370331040433107E-4 0.0 0.0 25.74238768186365 0.0 35 2.370331040433107E-4 0.0 0.0 26.488093827183903 0.0 36 2.370331040433107E-4 0.0 0.0 27.13851266467875 0.0 37 2.370331040433107E-4 0.0 0.0 27.814294044306227 0.0 38 2.370331040433107E-4 0.0 0.0 28.564266785499264 0.0 39 2.370331040433107E-4 0.0 0.0 29.841638183188664 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAATA 25 3.88992E-5 45.000004 12 CTAGACG 25 3.88992E-5 45.000004 4 TCCGATA 20 7.0322177E-4 45.000004 14 CGGTTAT 25 3.88992E-5 45.000004 11 AACATCG 30 2.164812E-6 45.000004 37 TATAGCG 20 7.0322177E-4 45.000004 1 CACCGTA 25 3.88992E-5 45.000004 45 CGTTTCG 30 2.164812E-6 45.000004 42 CGAGGGT 110 0.0 42.954544 4 GTTTGCG 160 0.0 42.187504 1 GCGATGT 160 0.0 42.187504 9 CCGTTAG 70 0.0 41.785713 1 TCTTGCG 190 0.0 41.44737 1 CGTTAGG 250 0.0 41.4 2 TTTAGGG 3240 0.0 40.694447 3 TGTAGGG 990 0.0 40.681816 3 TTAGGGT 795 0.0 40.4717 4 TAGGGTG 435 0.0 40.34483 5 TAGGGCG 435 0.0 40.34483 5 TCGTTTG 190 0.0 40.263157 1 >>END_MODULE