##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934284.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 669929 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.23582349771394 33.0 31.0 34.0 30.0 34.0 2 32.40596540827461 34.0 31.0 34.0 30.0 34.0 3 32.464532808700625 34.0 31.0 34.0 30.0 34.0 4 35.965800853523284 37.0 35.0 37.0 35.0 37.0 5 35.060321317632166 37.0 35.0 37.0 35.0 37.0 6 25.82957298459986 36.0 0.0 37.0 0.0 37.0 7 30.93861588317568 37.0 19.0 37.0 17.0 37.0 8 34.64940165301099 37.0 32.0 37.0 32.0 37.0 9 37.17007324656792 39.0 37.0 39.0 34.0 39.0 10 37.24082850570732 39.0 37.0 39.0 34.0 39.0 11 37.33226953901085 39.0 37.0 39.0 34.0 39.0 12 37.14331518713177 39.0 37.0 39.0 34.0 39.0 13 37.165562320783245 39.0 37.0 39.0 34.0 39.0 14 38.21045663047875 40.0 38.0 41.0 33.0 41.0 15 38.34925044295739 40.0 38.0 41.0 34.0 41.0 16 38.432956328207915 40.0 38.0 41.0 34.0 41.0 17 38.44337235736921 40.0 38.0 41.0 34.0 41.0 18 38.456575249018925 40.0 38.0 41.0 34.0 41.0 19 38.471366368674886 40.0 38.0 41.0 34.0 41.0 20 38.40819250995255 40.0 38.0 41.0 34.0 41.0 21 38.320592182156616 40.0 37.0 41.0 34.0 41.0 22 38.33753875410678 40.0 37.0 41.0 34.0 41.0 23 38.28848878015432 40.0 37.0 41.0 34.0 41.0 24 38.22697927690845 40.0 37.0 41.0 34.0 41.0 25 38.102834778013786 40.0 37.0 41.0 34.0 41.0 26 38.02982554867754 40.0 37.0 41.0 34.0 41.0 27 37.979003745172996 40.0 37.0 41.0 34.0 41.0 28 37.9317868012879 40.0 37.0 41.0 34.0 41.0 29 37.89515456115499 40.0 36.0 41.0 34.0 41.0 30 37.575290814399736 40.0 36.0 41.0 33.0 41.0 31 37.605082031080904 40.0 36.0 41.0 33.0 41.0 32 37.55975036160548 40.0 36.0 41.0 33.0 41.0 33 37.48290789023911 40.0 36.0 41.0 33.0 41.0 34 37.457418621973375 40.0 36.0 41.0 33.0 41.0 35 37.4121003867574 40.0 36.0 41.0 33.0 41.0 36 37.31170915126827 40.0 36.0 41.0 32.0 41.0 37 37.24860395653868 39.0 35.0 41.0 32.0 41.0 38 37.17518274324593 39.0 35.0 41.0 32.0 41.0 39 37.10465138843072 39.0 35.0 41.0 32.0 41.0 40 36.99599061990151 39.0 35.0 41.0 31.0 41.0 41 36.91590750661637 39.0 35.0 41.0 31.0 41.0 42 36.90617811738259 39.0 35.0 41.0 31.0 41.0 43 36.834221238370034 39.0 35.0 41.0 31.0 41.0 44 36.6626612670895 39.0 35.0 41.0 31.0 41.0 45 36.595545199565926 39.0 35.0 40.0 31.0 41.0 46 36.41769500947115 39.0 35.0 40.0 31.0 41.0 47 36.25313130197379 39.0 35.0 40.0 30.0 41.0 48 36.16052298079349 38.0 35.0 40.0 30.0 41.0 49 36.06255886817857 38.0 35.0 40.0 30.0 41.0 50 35.913238567072035 38.0 35.0 40.0 30.0 41.0 51 34.77923481443556 36.0 34.0 39.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 6.0 10 9.0 11 10.0 12 5.0 13 4.0 14 10.0 15 16.0 16 28.0 17 41.0 18 103.0 19 197.0 20 355.0 21 564.0 22 960.0 23 1429.0 24 2130.0 25 3093.0 26 4091.0 27 5012.0 28 5969.0 29 7502.0 30 9843.0 31 13406.0 32 18729.0 33 29055.0 34 42134.0 35 54886.0 36 70261.0 37 116341.0 38 149415.0 39 134235.0 40 87.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.953390583181204 4.395092614291962 55.84994827810112 14.801568524425724 2 20.954310083605876 3.9532547478911946 52.08462389297971 23.007811275523228 3 21.291808534934297 4.403451709061707 51.87863191472529 22.426107841278704 4 19.35832006078256 4.610190035063417 50.87972008974086 25.15176981441317 5 17.501406865503657 7.946364465488134 50.44609204856037 24.10613662044784 6 15.507314954271273 31.384519852103733 39.53165186161519 13.57651333200981 7 80.14088060078008 1.8306417545739921 11.724227492764157 6.304250151881767 8 80.70108921990241 2.119627602328008 10.034048384231761 7.145234793537823 9 75.22065771148883 4.540182616366809 13.345593338995625 6.893566333148737 10 36.494464338758284 25.980812892112446 21.528997849025792 15.995724920103473 11 27.37155728442865 25.256258499034974 26.401006673841554 20.97117754269482 12 23.528762003137647 22.50701193708587 33.59460480140433 20.369621258372156 13 23.742217458865046 24.470652860228473 32.907964873889625 18.879164807016863 14 19.792545180160882 27.107499451434407 32.401344023023334 20.698611345381376 15 17.399903571871047 26.312042022363563 34.73024753369387 21.55780687207152 16 19.420864002006184 26.981963760338783 29.73538986967276 23.86178236798228 17 19.653724499163346 26.748655454533242 28.46421038647379 25.133409659829624 18 21.28046404917536 25.09967474165173 31.451691149360606 22.168170059812308 19 21.599900885019157 27.47529962130315 28.401367906151247 22.523431587526442 20 22.51149002356966 28.45570202215459 29.46819737613986 19.56461057813589 21 22.71001852435109 27.888776273306576 30.32933340697298 19.07187179536936 22 20.772649041913397 26.380108936917196 28.330166331058965 24.517075690110445 23 20.26707307789333 27.043462814716186 28.12447289190347 24.564991215487016 24 21.642442706615178 26.707457058882362 27.966844247674004 23.683255986828456 25 20.943413406495313 27.781451467245038 25.360747183656773 25.914387942602872 26 21.53019200542147 27.960873465695617 26.659840072604705 23.849094456278202 27 20.41410358411115 28.592880738108068 27.25512703585007 23.737888641930713 28 18.96544260660458 26.975246630613093 27.607253903025548 26.45205685975678 29 22.764203370804967 26.31816207389141 26.634016440548177 24.283618114755445 30 22.98094275662048 28.95441158689951 25.96484105032026 22.099804606159758 31 21.651100340483843 30.321272851302155 25.529571044095718 22.498055764118288 32 22.89481422658222 30.680116848203316 23.199025568381128 23.226043356833337 33 20.905349671383085 29.70105787329702 24.617235557797915 24.776356897521975 34 19.00753661955222 26.233675508897214 29.31952490487798 25.439262966672587 35 21.760962728886195 28.51720107653199 24.963540912544463 24.758295282037352 36 22.51178856266858 29.971534296918033 24.39153999901482 23.125137141398568 37 19.148894882890573 30.02497279562461 26.99315897654826 23.832973344936555 38 20.141238847698787 30.545027905942273 25.169831429897794 24.143901816461145 39 21.500636634628446 27.449177450147705 27.015847948066142 24.034337967157715 40 22.569257339210573 26.921957401455977 28.089842356428818 22.418942902904636 41 18.856326565949526 28.14731113297081 25.792733259793206 27.203629041286465 42 20.79727851757425 26.845829931231517 25.616147382782355 26.74074416841188 43 21.94008618823786 25.341640681325934 26.664467428637963 26.05380570179825 44 21.38540054244554 25.195505792404866 25.689737270665997 27.729356394483595 45 22.848689935799165 24.73247164998082 24.68380977685695 27.73502863736306 46 21.73110881899425 26.352494070267145 28.115516718935886 23.800880391802714 47 17.97220302449961 27.605910477080407 30.269327048090172 24.15255945032981 48 18.312985405916148 26.928674531181663 28.786931152405703 25.971408910496486 49 21.872616351882066 23.847303221684683 30.21155973244926 24.068520693983988 50 20.897587654811183 24.055384973631533 27.919077991846898 27.127949379710387 51 18.505095316070808 24.236598206675634 26.407126725369405 30.851179751884157 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 98.0 1 256.0 2 414.0 3 1389.0 4 2364.0 5 1631.5 6 899.0 7 975.0 8 1051.0 9 1325.5 10 1600.0 11 1817.5 12 2035.0 13 2141.5 14 2248.0 15 2273.5 16 2299.0 17 2336.5 18 2374.0 19 2395.0 20 2416.0 21 2480.5 22 2545.0 23 2946.5 24 3348.0 25 3457.5 26 4207.0 27 4847.0 28 5650.5 29 6454.0 30 7658.0 31 8862.0 32 10820.0 33 12778.0 34 14658.5 35 16539.0 36 17550.5 37 18562.0 38 20781.0 39 23000.0 40 26600.0 41 30200.0 42 34830.5 43 39461.0 44 45744.0 45 52027.0 46 62687.5 47 73348.0 48 85005.5 49 96663.0 50 88023.5 51 79384.0 52 64932.5 53 50481.0 54 43502.0 55 36523.0 56 32114.0 57 27705.0 58 24167.0 59 20629.0 60 17711.5 61 14794.0 62 12760.5 63 10727.0 64 9065.5 65 7404.0 66 6133.5 67 4863.0 68 3975.5 69 3088.0 70 2434.0 71 1780.0 72 1462.5 73 1145.0 74 938.5 75 534.0 76 336.0 77 255.5 78 175.0 79 131.0 80 87.0 81 67.0 82 47.0 83 33.5 84 20.0 85 12.0 86 4.0 87 3.0 88 2.0 89 2.5 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 669929.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.79406225774259 #Duplication Level Percentage of deduplicated Percentage of total 1 74.13613656523104 31.725864437210046 2 10.701407018969483 9.159133564304472 3 3.9822215428048193 5.112463098807397 4 2.2416373262326488 3.8371506919231844 5 1.6057299255342126 3.4357853201215733 6 1.248079164569779 3.204622648271429 7 0.9747281551239825 2.91988041483252 8 0.7678708317137056 2.6288249742608722 9 0.616646432089796 2.3749925225279007 >10 3.577531192007915 23.924673178757512 >50 0.09114029989381761 2.686033569245518 >100 0.049944883195841165 4.037084824683629 >500 0.0025519283384736295 0.7800527156709864 >1k 0.004010173103315704 3.346270139685398 >5k 3.645611912105185E-4 0.827167899697514 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTGCT 5302 0.7914271512354295 TruSeq Adapter, Index 23 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTGC 4280 0.6388736716875967 TruSeq Adapter, Index 20 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTGC 4156 0.6203642475545915 TruSeq Adapter, Index 20 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTGC 2759 0.41183468695936437 TruSeq Adapter, Index 20 (95% over 21bp) CTGTCACTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTGCT 1526 0.22778533247553098 TruSeq Adapter, Index 23 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTG 1412 0.21076860383712304 No Hit TCTGTATCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTGC 1391 0.20763394329846893 TruSeq Adapter, Index 23 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTG 1273 0.1900201364622221 No Hit GCTGTATCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTGC 1227 0.18315373718707503 TruSeq Adapter, Index 23 (95% over 21bp) CCTGTATCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTGC 1191 0.17778003340652518 TruSeq Adapter, Index 23 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1136 0.16957020818624063 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCC 1098 0.1638979653067713 No Hit TTCCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCT 923 0.13777579415132052 No Hit CGTTCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTC 819 0.12225176100750974 No Hit TTCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTG 778 0.11613170947966128 No Hit GCCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTG 728 0.10866823200667533 No Hit TGCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTG 725 0.10822042335829618 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4926954945971888E-4 0.0 0.0 0.859643335338521 0.0 2 1.4926954945971888E-4 0.0 0.0 2.7307371378160967 0.0 3 1.4926954945971888E-4 0.0 0.0 3.7672648892643847 0.0 4 1.4926954945971888E-4 0.0 0.0 4.886935779761736 0.0 5 1.4926954945971888E-4 0.0 0.0 6.594280886482 0.0 6 1.4926954945971888E-4 0.0 0.0 7.571100818146401 0.0 7 1.4926954945971888E-4 0.0 0.0 8.794215506419336 0.0 8 1.4926954945971888E-4 0.0 0.0 10.600227785332475 0.0 9 1.4926954945971888E-4 0.0 0.0 11.419120533668494 0.0 10 1.4926954945971888E-4 0.0 0.0 12.922115627178403 0.0 11 1.4926954945971888E-4 0.0 0.0 15.745847694307905 0.0 12 1.4926954945971888E-4 0.0 0.0 17.9459315837947 0.0 13 2.9853909891943775E-4 0.0 0.0 18.790797233736708 0.0 14 2.9853909891943775E-4 0.0 0.0 19.07082690852314 0.0 15 2.9853909891943775E-4 0.0 0.0 19.485199177823322 0.0 16 2.9853909891943775E-4 0.0 0.0 20.482767576862624 0.0 17 2.9853909891943775E-4 0.0 0.0 21.98695682676821 0.0 18 2.9853909891943775E-4 0.0 0.0 23.58548443193234 0.0 19 2.9853909891943775E-4 0.0 0.0 24.570663458366482 0.0 20 2.9853909891943775E-4 0.0 0.0 25.577934378120666 0.0 21 2.9853909891943775E-4 0.0 0.0 26.833291289076904 0.0 22 2.9853909891943775E-4 0.0 0.0 28.079393487966634 0.0 23 2.9853909891943775E-4 0.0 0.0 29.339527024505582 0.0 24 2.9853909891943775E-4 0.0 0.0 30.241861450989582 0.0 25 2.9853909891943775E-4 0.0 0.0 31.053141452303155 0.0 26 2.9853909891943775E-4 0.0 0.0 31.759037151698166 0.0 27 2.9853909891943775E-4 0.0 0.0 32.502548777557024 0.0 28 2.9853909891943775E-4 0.0 0.0 33.235611534953705 0.0 29 2.9853909891943775E-4 0.0 0.0 34.003752636473415 0.0 30 2.9853909891943775E-4 0.0 0.0 34.79398563131317 0.0 31 2.9853909891943775E-4 0.0 0.0 35.53257136203986 0.0 32 2.9853909891943775E-4 0.0 0.0 36.224584993335114 0.0 33 2.9853909891943775E-4 0.0 0.0 36.902865826080074 0.0 34 4.478086483791566E-4 0.0 0.0 37.598760465661286 0.0 35 4.478086483791566E-4 0.0 0.0 38.29987953947359 0.0 36 4.478086483791566E-4 0.0 0.0 38.931289733688196 0.0 37 4.478086483791566E-4 0.0 0.0 39.55284813763846 0.0 38 4.478086483791566E-4 0.0 0.0 40.21799325003097 0.0 39 4.478086483791566E-4 0.0 0.0 41.01763022648669 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCG 20 7.031176E-4 45.000004 27 CGTCTCG 20 7.031176E-4 45.000004 42 GCGTTAG 30 2.1641408E-6 45.000004 1 CCTCGAC 20 7.031176E-4 45.000004 26 TCGGATC 20 7.031176E-4 45.000004 38 CCTCCGA 20 7.031176E-4 45.000004 30 AAACCGC 20 7.031176E-4 45.000004 26 CGTGTGA 20 7.031176E-4 45.000004 18 CCGTTAG 30 2.1641408E-6 45.000004 1 TCGTTGA 35 1.2109194E-7 45.0 24 TCGTTAG 90 0.0 45.0 1 CGTTGAT 35 1.2109194E-7 45.0 25 CGTTAGG 150 0.0 45.0 2 CGTAAGG 25 3.8890576E-5 45.0 2 TAGGGCG 405 0.0 43.88889 5 AGGGCGA 565 0.0 43.805305 6 AGGGCGC 90 0.0 42.5 6 TTAGGGA 1255 0.0 42.131474 4 CTAGGGA 850 0.0 42.088238 4 CGTTTTT 770 0.0 42.07792 1 >>END_MODULE