##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934283.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1719047 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.197569932642914 33.0 31.0 34.0 30.0 34.0 2 32.3430202897303 34.0 31.0 34.0 30.0 34.0 3 32.409864884438875 34.0 31.0 34.0 30.0 34.0 4 35.94197249987929 37.0 35.0 37.0 35.0 37.0 5 35.03454995704015 37.0 35.0 37.0 35.0 37.0 6 25.67101888430043 35.0 0.0 37.0 0.0 37.0 7 30.867450395480752 36.0 19.0 37.0 17.0 37.0 8 34.52758359719077 37.0 32.0 37.0 32.0 37.0 9 37.13295273485833 39.0 37.0 39.0 34.0 39.0 10 37.15877052808911 39.0 37.0 39.0 34.0 39.0 11 37.2700281027802 39.0 37.0 39.0 34.0 39.0 12 37.145402656239185 39.0 37.0 39.0 34.0 39.0 13 37.19273004170334 39.0 37.0 39.0 34.0 39.0 14 38.388879419818075 40.0 38.0 41.0 34.0 41.0 15 38.4425609072934 40.0 38.0 41.0 34.0 41.0 16 38.538874736990905 40.0 38.0 41.0 34.0 41.0 17 38.48570632449258 40.0 38.0 41.0 34.0 41.0 18 38.46553991833847 40.0 38.0 41.0 34.0 41.0 19 38.48158776345266 40.0 38.0 41.0 34.0 41.0 20 38.402897652013 40.0 38.0 41.0 34.0 41.0 21 38.34304995733101 40.0 37.0 41.0 34.0 41.0 22 38.349959017990784 40.0 37.0 41.0 34.0 41.0 23 38.27209378219444 40.0 37.0 41.0 34.0 41.0 24 38.20958240234269 40.0 37.0 41.0 34.0 41.0 25 38.10571206022872 40.0 37.0 41.0 34.0 41.0 26 38.07975814506526 40.0 37.0 41.0 34.0 41.0 27 38.06911562045715 40.0 37.0 41.0 34.0 41.0 28 38.03039765637589 40.0 37.0 41.0 34.0 41.0 29 38.03740386388505 40.0 37.0 41.0 34.0 41.0 30 37.79378050745559 40.0 37.0 41.0 33.0 41.0 31 37.84373085785322 40.0 37.0 41.0 33.0 41.0 32 37.7621699697565 40.0 37.0 41.0 33.0 41.0 33 37.670890324697346 40.0 37.0 41.0 33.0 41.0 34 37.62594332790203 40.0 37.0 41.0 33.0 41.0 35 37.626685599637476 40.0 37.0 41.0 33.0 41.0 36 37.548596984259305 40.0 37.0 41.0 33.0 41.0 37 37.51042990680301 40.0 37.0 41.0 33.0 41.0 38 37.39557615353158 40.0 36.0 41.0 33.0 41.0 39 37.325279064504926 40.0 36.0 41.0 33.0 41.0 40 37.241101610369 40.0 36.0 41.0 32.0 41.0 41 37.20296652738407 40.0 36.0 41.0 32.0 41.0 42 37.1945833941713 39.0 36.0 41.0 32.0 41.0 43 37.10970264338322 39.0 36.0 41.0 32.0 41.0 44 36.98349725167491 39.0 35.0 41.0 31.0 41.0 45 36.9812343699736 39.0 35.0 41.0 31.0 41.0 46 36.90643827655672 39.0 35.0 41.0 31.0 41.0 47 36.81986530909277 39.0 35.0 41.0 31.0 41.0 48 36.81521913013431 39.0 35.0 41.0 31.0 41.0 49 36.80641890535861 39.0 35.0 41.0 31.0 41.0 50 36.710636183885605 39.0 35.0 40.0 31.0 41.0 51 35.666792705493215 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 9.0 10 8.0 11 13.0 12 5.0 13 10.0 14 15.0 15 23.0 16 49.0 17 108.0 18 212.0 19 449.0 20 857.0 21 1483.0 22 2298.0 23 3623.0 24 5475.0 25 8338.0 26 10881.0 27 12872.0 28 14485.0 29 17531.0 30 23016.0 31 31264.0 32 43658.0 33 66215.0 34 98106.0 35 132258.0 36 171053.0 37 284756.0 38 391691.0 39 398093.0 40 191.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.735541843823935 4.250087403078566 54.60036869265355 13.414002060443956 2 19.97874403666683 8.770499003226789 50.37820373730328 20.8725532228031 3 19.68538382022132 8.698715043858602 50.1141620909725 21.50173904494758 4 17.694687812491456 4.178245271944281 54.16786161169532 23.95920530386895 5 19.40546128174506 7.849698117619821 49.068757282377966 23.676083318257152 6 14.67935431666499 34.10284884590125 38.763861604714705 12.453935232719058 7 79.99228642381505 1.6875047628133495 13.52592453842158 4.794284274950016 8 80.4812201178909 4.9496610622048145 9.008945072473294 5.56017374743099 9 75.61579177299981 4.249563857183661 10.989868223498252 9.14477614631828 10 37.11992749471073 26.047222676285177 20.21236184932698 16.62048797967711 11 26.941497236550248 24.885997881384277 26.76826171710256 21.404243164962914 12 23.17121056026973 21.250087984796227 32.357288660519465 23.22141279441458 13 22.930030418016496 22.799143944290062 35.23120659295528 19.03961904473816 14 20.54719853500224 26.14547478922915 31.114507049545477 22.192819626223134 15 17.20656852314102 25.775851387425707 36.0287996779611 20.98878041147217 16 19.037757548222938 24.97761841299278 31.077626149837673 24.90699788894661 17 19.15049443092597 25.473009173105797 30.923296454372682 24.453199941595546 18 19.746231487562586 24.40578995222353 32.13897002234378 23.709008537870112 19 20.54981626447677 27.02363577028435 29.85840410413444 22.568143861104435 20 22.307243490143087 26.564835051048636 31.861956072172546 19.265965386635735 21 21.856354131097056 28.69572501508103 29.91936811500791 19.528552738814007 22 20.452960273919214 24.259953334609232 29.965032951396907 25.322053440074644 23 20.0767634625464 27.199721706270974 28.507888382342077 24.21562644884055 24 21.16981094757735 24.38961820124755 29.369877612421302 25.0706932387538 25 18.653242174297734 28.838420357325887 27.295414261506522 25.212923206869853 26 18.385361191404307 25.575856855571722 30.773096954300843 25.26568499872313 27 19.551588758189858 26.740164754075952 29.56841785012277 24.139828637611423 28 17.024898097608734 24.247853607260303 34.20127547414352 24.525972820987445 29 19.66461649972339 22.175600783457348 32.042753921213325 26.11702879560594 30 19.680962765997673 25.933264186494025 30.754947363277445 23.630825684230857 31 20.130514174423386 25.901909604565788 29.10595230962272 24.86162391138811 32 20.840209720851146 27.802323031307463 28.440001931302632 22.917465316538756 33 20.285483759315483 25.594646336022226 26.58211206558052 27.537757839081774 34 19.39551390974185 23.768634598123263 30.86436845531274 25.971483036822146 35 18.843638364745118 22.993263127767886 30.732144030965998 27.430954476521002 36 19.559732805443947 24.967147495094665 30.846975097248652 24.626144602212737 37 19.12629497622811 23.994108363529328 31.57231884875748 25.307277811485086 38 20.536029555910922 25.889286331321948 30.055548219449495 23.519135893317635 39 23.08156786870865 24.678091989340604 28.56041748713095 23.679922654819794 40 19.463167673716892 25.010543632605742 30.69177282529215 24.834515868385214 41 18.577269847770307 23.857695572023335 29.83339024471117 27.731644335495194 42 20.97132888164198 21.86670870546297 32.586543590722066 24.575418822172985 43 23.305063794067294 22.23255094246987 29.846246205019412 24.61613905844343 44 20.486409039427077 22.409800313778504 29.29419614472437 27.80959450207004 45 20.399907623235432 21.678930244490115 28.692409224413296 29.228752907861157 46 22.56744579991123 23.008678645784553 29.37691639611948 25.04695915818474 47 17.478521529661492 22.610958280954506 34.873857433799074 25.036662755584928 48 19.215704980724784 22.75283921847396 31.733803671452847 26.297652129348414 49 21.203899602512323 20.633176405298983 34.137461046731126 24.02546294545757 50 21.50447311795431 20.286181820508688 30.39009404629425 27.819251015242745 51 18.868361365337886 20.241913106506104 28.466295569580126 32.42342995857588 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 243.0 1 809.5 2 1376.0 3 5809.0 4 10242.0 5 6861.0 6 3480.0 7 3447.0 8 3414.0 9 3500.0 10 3586.0 11 3720.0 12 3854.0 13 4007.0 14 4160.0 15 4186.5 16 4213.0 17 3999.5 18 3786.0 19 4019.0 20 4252.0 21 4638.0 22 5024.0 23 5717.0 24 6410.0 25 7145.0 26 10012.5 27 12145.0 28 14847.0 29 17549.0 30 20281.0 31 23013.0 32 26108.5 33 29204.0 34 35117.0 35 41030.0 36 44816.0 37 48602.0 38 55499.0 39 62396.0 40 72262.0 41 82128.0 42 94098.0 43 106068.0 44 124037.0 45 142006.0 46 193523.5 47 245041.0 48 236702.5 49 228364.0 50 213135.5 51 197907.0 52 164369.0 53 130831.0 54 106774.5 55 82718.0 56 69891.5 57 57065.0 58 51558.5 59 46052.0 60 40701.5 61 35351.0 62 29821.5 63 24292.0 64 20012.5 65 15733.0 66 13140.5 67 10548.0 68 8964.0 69 7380.0 70 6180.5 71 4981.0 72 4090.0 73 3199.0 74 2477.0 75 1378.0 76 1001.0 77 741.5 78 482.0 79 317.0 80 152.0 81 120.0 82 88.0 83 58.5 84 29.0 85 19.0 86 9.0 87 6.0 88 3.0 89 2.0 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1719047.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.42075608848047 #Duplication Level Percentage of deduplicated Percentage of total 1 70.1117906461895 26.23636216697664 2 13.427654071216988 10.049459356790054 3 5.1321447607369635 5.761462119069327 4 2.660353257551453 3.982097214401095 5 1.5200744505898336 2.8441167625926562 6 1.0500313584730119 2.3575780410404628 7 0.7272786351015826 1.905072148874952 8 0.5591983649430676 1.6740500495689297 9 0.48120698545105867 1.6206416307573333 >10 4.156604832786576 29.289119371920087 >50 0.11055963110084188 2.8141101253956577 >100 0.05536895712079518 3.7232527255372525 >500 0.0036912505342461812 0.9323075789505728 >1k 0.00316392902935387 3.1823694994205316 >5k 3.515476699282077E-4 0.7756293897971748 >10k+ 5.273215048923116E-4 2.852371818907266 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGC 17860 1.0389477425573588 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCG 13526 0.7868313082772024 No Hit GAATCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTC 11979 0.6968395861195185 No Hit CTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTGCT 5963 0.3468782412580924 TruSeq Adapter, Index 13 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTGC 5829 0.3390832246006072 TruSeq Adapter, Index 19 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTGC 4811 0.27986436671015974 TruSeq Adapter, Index 19 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTGC 4733 0.27532696895431014 TruSeq Adapter, Index 19 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4552 0.264797879290095 No Hit GAATCAGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTC 4125 0.23995853516512347 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTC 3981 0.23158180084663188 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCT 3743 0.21773692051468052 No Hit GAACTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCT 2960 0.17218842765788253 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCTGACTGTCGTA 2947 0.17143219469857426 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCTGACTGT 2821 0.16410255216989414 No Hit GCTGTATCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTGC 2170 0.1262327324383801 TruSeq Adapter, Index 13 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTG 1802 0.10482552251334606 TruSeq Adapter, Index 13 (95% over 21bp) TCTGTATCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTGC 1775 0.10325488482862888 TruSeq Adapter, Index 13 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTG 1758 0.10226596480491806 TruSeq Adapter, Index 13 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1634353220127198E-4 0.0 0.0 0.36339902283067305 0.0 2 1.1634353220127198E-4 0.0 0.0 1.3324243025350675 0.0 3 1.1634353220127198E-4 0.0 0.0 1.8685352989185287 0.0 4 1.1634353220127198E-4 0.0 0.0 2.6810785278122125 0.0 5 1.1634353220127198E-4 0.0 0.0 4.421635941309342 0.0 6 1.1634353220127198E-4 0.0 0.0 5.2049769436205064 0.0 7 1.1634353220127198E-4 0.0 0.0 6.334207267166052 0.0 8 1.7451529830190797E-4 0.0 0.0 8.046609545870474 0.0 9 1.7451529830190797E-4 0.0 0.0 8.669803676106588 0.0 10 2.3268706440254396E-4 0.0 0.0 10.879341867907044 0.0 11 2.3268706440254396E-4 0.0 0.0 13.612309611081024 0.0 12 2.3268706440254396E-4 0.0 0.0 17.184405080256678 0.0 13 2.9085883050317997E-4 0.0 0.0 18.077050831070938 0.0 14 3.4903059660381595E-4 0.0 0.0 18.391411055078773 0.0 15 3.4903059660381595E-4 0.0 0.0 18.949103776685572 0.0 16 3.4903059660381595E-4 0.0 0.0 19.929065348416884 0.0 17 3.4903059660381595E-4 0.0 0.0 21.322104631228814 0.0 18 3.4903059660381595E-4 0.0 0.0 22.717761643515274 0.0 19 3.4903059660381595E-4 0.0 0.0 24.046521124786 0.0 20 3.4903059660381595E-4 0.0 0.0 25.162197426830097 0.0 21 3.4903059660381595E-4 0.0 0.0 26.812995805233946 0.0 22 3.4903059660381595E-4 0.0 0.0 28.592877332615107 0.0 23 3.4903059660381595E-4 0.0 0.0 30.306152187811037 0.0 24 3.4903059660381595E-4 0.0 0.0 31.532354845446342 0.0 25 3.4903059660381595E-4 0.0 0.0 32.62970704116874 0.0 26 3.4903059660381595E-4 0.0 0.0 33.55731402340948 0.0 27 3.4903059660381595E-4 0.0 0.0 34.48486283388412 0.0 28 3.4903059660381595E-4 0.0 0.0 35.44114849681248 0.0 29 3.4903059660381595E-4 0.0 0.0 36.42820702400807 0.0 30 3.4903059660381595E-4 0.0 0.0 37.49542624489034 0.0 31 3.4903059660381595E-4 0.0 0.0 38.49452632766876 0.0 32 3.4903059660381595E-4 0.0 0.0 39.50770397784354 0.0 33 3.4903059660381595E-4 0.0 0.0 40.44008104490453 0.0 34 3.4903059660381595E-4 0.0 0.0 41.32371017197319 0.0 35 3.4903059660381595E-4 0.0 0.0 42.27987949136934 0.0 36 3.4903059660381595E-4 0.0 0.0 43.17473576929543 0.0 37 3.4903059660381595E-4 0.0 0.0 44.07127902843843 0.0 38 3.4903059660381595E-4 0.0 0.0 44.93565330092778 0.0 39 3.4903059660381595E-4 0.0 0.0 45.81462868670839 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGAAC 20 7.0342625E-4 45.000004 19 CGCGCAT 30 2.1661326E-6 45.000004 36 CGTCTAT 35 1.2123928E-7 45.000004 1 CTTACGT 20 7.0342625E-4 45.000004 22 CGTTTAT 955 0.0 42.87958 1 AGGGCGA 1005 0.0 42.53731 6 TTAGGGA 3930 0.0 42.13741 4 CTTAGGG 3385 0.0 41.875923 3 TAGGGCG 755 0.0 41.721855 5 TAGGGTA 950 0.0 41.684208 5 CGTTTTT 2450 0.0 41.510204 1 CGTTAGG 450 0.0 41.5 2 CTAGGGT 800 0.0 41.062504 4 TCTTAGG 2005 0.0 40.84788 2 CTAGGGA 2225 0.0 40.651684 4 TTTAGGG 6445 0.0 40.531418 3 TCGTTAG 300 0.0 40.500004 1 CGAGGGT 200 0.0 40.500004 4 TAGGGAC 1860 0.0 40.40322 5 GTTAGGG 2340 0.0 40.28846 3 >>END_MODULE