##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934281.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 552951 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.284551434033034 33.0 31.0 34.0 31.0 34.0 2 32.45436937450154 34.0 31.0 34.0 31.0 34.0 3 32.50048919343667 34.0 31.0 34.0 30.0 34.0 4 35.99813003322175 37.0 35.0 37.0 35.0 37.0 5 35.122623885299056 37.0 35.0 37.0 35.0 37.0 6 26.08653388817454 36.0 0.0 37.0 0.0 37.0 7 31.090968277478474 37.0 19.0 37.0 17.0 37.0 8 34.695687321299715 37.0 32.0 37.0 32.0 37.0 9 37.208481402511254 39.0 37.0 39.0 34.0 39.0 10 37.34332698557377 39.0 37.0 39.0 34.0 39.0 11 37.392848552584226 39.0 37.0 39.0 35.0 39.0 12 37.03714614857374 39.0 35.0 39.0 34.0 39.0 13 36.97518767485727 39.0 37.0 39.0 33.0 39.0 14 37.957026933670434 40.0 37.0 41.0 33.0 41.0 15 38.13202616506707 40.0 37.0 41.0 33.0 41.0 16 38.28864221242027 40.0 37.0 41.0 34.0 41.0 17 38.300451577083685 40.0 37.0 41.0 34.0 41.0 18 38.28747393530349 40.0 37.0 41.0 34.0 41.0 19 38.29337500067818 40.0 37.0 41.0 34.0 41.0 20 38.19178552891667 40.0 36.0 41.0 34.0 41.0 21 38.1053673833667 40.0 36.0 41.0 34.0 41.0 22 38.12552468482741 40.0 36.0 41.0 34.0 41.0 23 38.07558535928138 40.0 36.0 41.0 34.0 41.0 24 38.013833052114926 40.0 36.0 41.0 34.0 41.0 25 37.90172366086688 40.0 36.0 41.0 34.0 41.0 26 37.84544019271147 40.0 36.0 41.0 34.0 41.0 27 37.82231698649609 40.0 35.0 41.0 34.0 41.0 28 37.77160905758377 40.0 36.0 41.0 34.0 41.0 29 37.78424670540428 40.0 36.0 41.0 34.0 41.0 30 37.570669010454814 40.0 36.0 41.0 33.0 41.0 31 37.56695439559744 40.0 35.0 41.0 33.0 41.0 32 37.47559548676103 40.0 35.0 41.0 33.0 41.0 33 37.39210888487407 40.0 35.0 41.0 33.0 41.0 34 37.32756247841129 40.0 35.0 41.0 33.0 41.0 35 37.28361283368689 40.0 35.0 41.0 33.0 41.0 36 37.1816634747021 39.0 35.0 41.0 33.0 41.0 37 37.10828084224461 39.0 35.0 41.0 32.0 41.0 38 37.053357349927936 39.0 35.0 41.0 32.0 41.0 39 37.02878374394838 39.0 35.0 41.0 32.0 41.0 40 36.94598798085183 39.0 35.0 41.0 32.0 41.0 41 36.84297342802527 39.0 35.0 41.0 32.0 41.0 42 36.811428137393726 39.0 35.0 41.0 32.0 41.0 43 36.730578297172805 39.0 35.0 41.0 31.0 41.0 44 36.62701577535803 39.0 35.0 41.0 31.0 41.0 45 36.608368553452294 39.0 35.0 41.0 31.0 41.0 46 36.57032720801662 39.0 35.0 41.0 31.0 41.0 47 36.48083103204443 39.0 35.0 40.0 31.0 41.0 48 36.47377977433805 39.0 35.0 40.0 31.0 41.0 49 36.47179587341374 39.0 35.0 40.0 31.0 41.0 50 36.374566643337296 39.0 35.0 40.0 31.0 41.0 51 35.40217125929784 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 4.0 11 8.0 12 6.0 13 3.0 14 7.0 15 11.0 16 24.0 17 43.0 18 78.0 19 167.0 20 270.0 21 537.0 22 864.0 23 1183.0 24 1829.0 25 2882.0 26 3846.0 27 4669.0 28 5333.0 29 6276.0 30 8012.0 31 10756.0 32 15359.0 33 25956.0 34 38719.0 35 49641.0 36 50708.0 37 82570.0 38 116899.0 39 126213.0 40 75.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.967673446652597 4.502207248020168 53.22153319191031 17.308586113416922 2 21.532830214612144 5.097558373165072 51.62808277767831 21.741528634544473 3 21.18940014576337 5.46124340131404 50.57880354678805 22.77055290613454 4 19.294838059791918 4.993209163198909 51.412331291561095 24.29962148544808 5 18.34918464746424 7.7968933956173325 49.43693021623978 24.41699174067865 6 15.924738358371718 31.265699854055782 39.41524655891752 13.39431522865498 7 80.79160721293569 2.2045353024047336 11.654558903049276 5.349298581610305 8 81.01477346093958 3.1254125591598534 9.953142321833218 5.906671658067351 9 75.59241234756787 5.096834981761495 12.278664836486415 7.032087834184223 10 41.560463766228835 24.650466316183532 19.078724877972913 14.710345039614722 11 31.51436564903581 23.53807118533107 25.89379529108366 19.05376787454946 12 29.64060106591723 20.449732435604602 30.860962363753753 19.048704134724414 13 25.676958717861076 24.069221323408403 31.205115824006107 19.048704134724414 14 19.668831415441876 26.9602550678089 32.267777795862564 21.103135720886662 15 16.598215755103073 24.68555079925708 38.772513296838234 19.94372014880161 16 20.570357952151276 22.766755101265755 34.12164911538274 22.541237831200235 17 20.365819032789524 23.614931521961257 29.6717068962711 26.34754254897812 18 20.977989008067624 22.959719758170255 33.40928943070905 22.653001803053073 19 23.025548375895873 25.207116001237 29.942797824762053 21.824537798105077 20 24.615381833109986 26.957542350045482 30.091093062495595 18.33598275434894 21 23.72723803736678 26.109727625051764 31.039640040437575 19.123394297143868 22 20.822640704149194 23.714397839953268 30.426565825905005 25.03639562999253 23 19.813509696157524 25.92833723060452 30.006275420426043 24.251877652811913 24 21.6107756383477 24.29618537628108 30.697475906545062 23.395563078826154 25 20.649569310843095 24.899674654716243 28.6634801275339 25.78727590690676 26 19.102054250738313 26.313181457308154 29.953106152263036 24.631658139690497 27 20.578134409739743 25.93032655696436 30.751911109664327 22.73962792363157 28 17.038218576329548 24.589158894730275 32.97670137136925 25.39592115757092 29 18.685019106575446 23.436796388830114 32.9018303610989 24.976354143495534 30 22.42856962009292 22.471611408605828 31.94821964333187 23.151599327969386 31 22.20232895862382 24.551542541744205 29.747120450094133 23.499008049537842 32 24.341035643302934 24.9076319601556 27.85924973460578 22.892082661935685 33 23.808077026716653 22.52803593808493 30.174825617459778 23.489061417738643 34 19.97301750064653 22.20504167638724 33.40314060377864 24.418800219187595 35 21.18433640593832 21.738815916781054 31.178531189924602 25.89831648735602 36 23.48942311344043 22.523876437514353 31.722702373266348 22.263998075778865 37 21.538255650138982 24.619541333680562 30.318599658920952 23.523603357259503 38 20.412296930469427 24.73962430667455 28.278274205128483 26.56980455772754 39 19.83503059041398 22.475409213474613 32.69041922340316 24.99914097270825 40 22.941996668782586 21.29718546489653 33.383609035882024 22.377208830438864 41 20.736918822825167 21.31237668437167 31.984027517808993 25.96667697499417 42 22.642331779850295 21.076912782506948 31.70895793659836 24.571797501044397 43 21.88566437170744 21.305685313888574 31.218679412823196 25.589970901580788 44 20.499103898898817 21.782400248846642 29.839533701901257 27.87896215035329 45 20.436530542489297 21.575329459572366 29.12862080003472 28.85951919790361 46 22.176648563796793 21.931780573685554 31.864848784069476 24.02672207844818 47 18.653370732668897 22.211190503317653 34.753893202110135 24.381545561903316 48 19.933954364853303 21.081433978779312 32.94469130176091 26.039920354606465 49 21.06063647592644 19.37676213624715 34.591130136305026 24.971471251521383 50 20.54467755732425 20.279373760061922 31.969197994035635 27.20675068857819 51 18.832771800756305 20.512848335566805 29.6948554211856 30.959524442491286 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 81.0 1 305.0 2 529.0 3 2484.0 4 4439.0 5 2849.5 6 1260.0 7 1319.5 8 1379.0 9 1418.0 10 1457.0 11 1487.5 12 1518.0 13 1547.0 14 1576.0 15 1554.5 16 1533.0 17 1415.5 18 1298.0 19 1224.5 20 1151.0 21 1258.0 22 1365.0 23 1757.0 24 2149.0 25 2431.0 26 3242.5 27 3772.0 28 4723.0 29 5674.0 30 6922.0 31 8170.0 32 9160.0 33 10150.0 34 11277.5 35 12405.0 36 13275.5 37 14146.0 38 16300.0 39 18454.0 40 21702.0 41 24950.0 42 28689.0 43 32428.0 44 37623.5 45 42819.0 46 49996.0 47 57173.0 48 63527.0 49 69881.0 50 65880.5 51 61880.0 52 52427.0 53 42974.0 54 36995.0 55 31016.0 56 28114.5 57 25213.0 58 23204.5 59 21196.0 60 18836.0 61 16476.0 62 14076.5 63 11677.0 64 9617.0 65 7557.0 66 6207.5 67 4858.0 68 3967.5 69 3077.0 70 2491.0 71 1905.0 72 1493.5 73 1082.0 74 950.0 75 654.0 76 490.0 77 322.0 78 154.0 79 103.0 80 52.0 81 30.5 82 9.0 83 6.5 84 4.0 85 9.5 86 15.0 87 18.5 88 22.0 89 13.0 90 4.0 91 2.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 552951.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.79585233944664 #Duplication Level Percentage of deduplicated Percentage of total 1 70.25717302962727 24.446582185258634 2 12.10746822218186 8.42579352927165 3 4.589358648276706 4.79071937574596 4 2.427840555360356 3.3791512587215626 5 1.5433854158467264 2.6851705516329067 6 1.0668500478430207 2.22731740398464 7 0.8796262763775214 2.1425142218710658 8 0.725116946679983 2.018484976440567 9 0.6212045613387273 1.9453807970039767 >10 5.5907990631523035 38.40410184714533 >50 0.1354841457389963 3.198447622345993 >100 0.04712492025703687 2.7128574968675356 >500 0.005355104574663281 1.3591306121403808 >1k 0.0032130627447979686 2.2643481215697707 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTGCT 2569 0.4645981289481346 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTGC 2561 0.46315134614097814 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2041 0.3691104636758049 No Hit GCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTGC 1956 0.353738396349767 No Hit TCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTGC 1942 0.3512065264372431 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGC 1083 0.19585822251881269 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCG 992 0.17940106808740738 No Hit CTGTCACTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTGCT 793 0.14341234575938916 Illumina Single End Adapter 1 (95% over 21bp) CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 758 0.13708267097807944 No Hit GCTGTATCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTGC 748 0.1352741924691338 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTC 743 0.13436995321466097 No Hit TCCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTG 741 0.13400825751287185 No Hit CCTGTATCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTGC 721 0.13039130049498057 No Hit TCTGTATCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTGC 660 0.11935958159041218 No Hit CGCTGTCTCTTATACACATCTGACGCTGCCTTGTTCGTATGCCGTCTTCTG 620 0.11212566755462962 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8084785089456389E-4 0.0 0.0 0.49154445873142466 0.0 2 1.8084785089456389E-4 0.0 0.0 1.7656175682836273 0.0 3 1.8084785089456389E-4 0.0 0.0 2.482860144931468 0.0 4 1.8084785089456389E-4 0.0 0.0 3.257431490312885 0.0 5 1.8084785089456389E-4 0.0 0.0 4.5204728809605195 0.0 6 1.8084785089456389E-4 0.0 0.0 5.249289720065612 0.0 7 1.8084785089456389E-4 0.0 0.0 6.211581134675586 0.0 8 1.8084785089456389E-4 0.0 0.0 7.632864394855964 0.0 9 1.8084785089456389E-4 0.0 0.0 8.264204242328887 0.0 10 1.8084785089456389E-4 0.0 0.0 9.666136782463546 0.0 11 3.6169570178912777E-4 0.0 0.0 12.101253094758848 0.0 12 3.6169570178912777E-4 0.0 0.0 14.410137607129746 0.0 13 3.6169570178912777E-4 0.0 0.0 15.13389070640979 0.0 14 3.6169570178912777E-4 0.0 0.0 15.399917895075694 0.0 15 3.6169570178912777E-4 0.0 0.0 15.779336686252488 0.0 16 3.6169570178912777E-4 0.0 0.0 16.679778135856523 0.0 17 3.6169570178912777E-4 0.0 0.0 17.878618539436587 0.0 18 3.6169570178912777E-4 0.0 0.0 19.23081792057524 0.0 19 3.6169570178912777E-4 0.0 0.0 20.097259974211095 0.0 20 3.6169570178912777E-4 0.0 0.0 20.99137174903382 0.0 21 3.6169570178912777E-4 0.0 0.0 22.214988308186438 0.0 22 3.6169570178912777E-4 0.0 0.0 23.485625308571645 0.0 23 3.6169570178912777E-4 0.0 0.0 24.724433087199408 0.0 24 5.425435526836917E-4 0.0 0.0 25.564290506753764 0.0 25 5.425435526836917E-4 0.0 0.0 26.348446788232593 0.0 26 5.425435526836917E-4 0.0 0.0 27.001126682111074 0.0 27 5.425435526836917E-4 0.0 0.0 27.721986215776806 0.0 28 5.425435526836917E-4 0.0 0.0 28.437601161766594 0.0 29 5.425435526836917E-4 0.0 0.0 29.2291722051321 0.0 30 5.425435526836917E-4 0.0 0.0 30.078614560783866 0.0 31 5.425435526836917E-4 0.0 0.0 30.87561103967621 0.0 32 5.425435526836917E-4 0.0 0.0 31.59411955128031 0.0 33 5.425435526836917E-4 0.0 0.0 32.312808910735306 0.0 34 5.425435526836917E-4 0.0 0.0 33.069114623176375 0.0 35 5.425435526836917E-4 0.0 0.0 33.83048407544249 0.0 36 5.425435526836917E-4 0.0 0.0 34.6084915299909 0.0 37 5.425435526836917E-4 0.0 0.0 35.3107237350145 0.0 38 5.425435526836917E-4 0.0 0.0 36.09524171219511 0.0 39 5.425435526836917E-4 0.0 0.0 37.19154138431796 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 65 0.0 45.000004 1 CGTTCAT 50 2.1827873E-11 45.000004 17 CGGTGTA 25 3.88817E-5 45.000004 13 TAGTCCG 25 3.88817E-5 45.000004 1 CTCACGC 20 7.030107E-4 45.0 19 GTTTACG 20 7.030107E-4 45.0 1 CCGTCCC 20 7.030107E-4 45.0 13 TATTGCG 20 7.030107E-4 45.0 1 CGAATAT 35 1.2103919E-7 45.0 14 GTCCATT 20 7.030107E-4 45.0 22 ACTCACG 20 7.030107E-4 45.0 18 TCGACGT 45 3.8380676E-10 45.0 26 CGTTTAT 335 0.0 45.0 1 TAGCTAT 20 7.030107E-4 45.0 23 TTCGACG 45 3.8380676E-10 45.0 25 CCGCACA 20 7.030107E-4 45.0 13 TCGCGAG 20 7.030107E-4 45.0 1 CGGGTAC 30 2.1634514E-6 44.999996 6 TAGGTTC 30 2.1634514E-6 44.999996 5 TACGCAC 30 2.1634514E-6 44.999996 19 >>END_MODULE