##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934279.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1262550 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.32226367272583 33.0 31.0 34.0 31.0 34.0 2 32.49126688051958 34.0 31.0 34.0 31.0 34.0 3 32.54205536414399 34.0 31.0 34.0 31.0 34.0 4 36.03350362361887 37.0 35.0 37.0 35.0 37.0 5 35.167226644489325 37.0 35.0 37.0 35.0 37.0 6 26.138891133024433 37.0 0.0 37.0 0.0 37.0 7 31.116080155241377 37.0 19.0 37.0 17.0 37.0 8 34.753717476535584 37.0 32.0 37.0 32.0 37.0 9 37.252211001544495 39.0 37.0 39.0 35.0 39.0 10 37.34937784642192 39.0 37.0 39.0 34.0 39.0 11 37.3950528691933 39.0 37.0 39.0 35.0 39.0 12 37.054614074690114 39.0 37.0 39.0 34.0 39.0 13 37.009697041701315 39.0 37.0 39.0 33.0 39.0 14 37.94038731139361 40.0 37.0 41.0 33.0 41.0 15 38.121869232901666 40.0 37.0 41.0 33.0 41.0 16 38.27869628925587 40.0 37.0 41.0 33.0 41.0 17 38.306170052671185 40.0 37.0 41.0 34.0 41.0 18 38.28973426794978 40.0 37.0 41.0 34.0 41.0 19 38.27854263197497 40.0 37.0 41.0 34.0 41.0 20 38.1700019801196 40.0 37.0 41.0 34.0 41.0 21 38.0561783691735 40.0 36.0 41.0 34.0 41.0 22 38.097726030652254 40.0 36.0 41.0 34.0 41.0 23 38.05081462120312 40.0 36.0 41.0 34.0 41.0 24 37.979606352223676 40.0 36.0 41.0 34.0 41.0 25 37.865121381331434 40.0 36.0 41.0 34.0 41.0 26 37.80927171201141 40.0 35.0 41.0 34.0 41.0 27 37.78342085461962 40.0 35.0 41.0 34.0 41.0 28 37.711084709516456 40.0 35.0 41.0 33.0 41.0 29 37.67483505603739 40.0 35.0 41.0 33.0 41.0 30 37.42387469803176 39.0 35.0 41.0 33.0 41.0 31 37.40481881905667 39.0 35.0 41.0 33.0 41.0 32 37.33130331472021 39.0 35.0 41.0 33.0 41.0 33 37.25308779850303 39.0 35.0 41.0 33.0 41.0 34 37.1335741158766 39.0 35.0 41.0 32.0 41.0 35 37.076444497247635 39.0 35.0 41.0 32.0 41.0 36 37.000061779731496 39.0 35.0 41.0 32.0 41.0 37 36.94652647419904 39.0 35.0 41.0 32.0 41.0 38 36.882438715298406 39.0 35.0 41.0 32.0 41.0 39 36.8326941507267 39.0 35.0 41.0 31.0 41.0 40 36.75543701239555 39.0 35.0 41.0 31.0 41.0 41 36.61515979565166 39.0 35.0 41.0 31.0 41.0 42 36.54474278246406 39.0 35.0 41.0 31.0 41.0 43 36.48997267434953 39.0 35.0 41.0 31.0 41.0 44 36.36934458041266 39.0 35.0 40.0 31.0 41.0 45 36.350092273573324 39.0 35.0 40.0 31.0 41.0 46 36.28871252623659 38.0 35.0 40.0 31.0 41.0 47 36.20461130252267 38.0 35.0 40.0 31.0 41.0 48 36.16474199041622 38.0 35.0 40.0 31.0 41.0 49 36.14897469407152 38.0 35.0 40.0 31.0 41.0 50 36.06509207556137 38.0 35.0 40.0 31.0 41.0 51 35.03091758742228 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 9.0 10 14.0 11 10.0 12 16.0 13 11.0 14 11.0 15 42.0 16 51.0 17 139.0 18 235.0 19 455.0 20 791.0 21 1306.0 22 2075.0 23 3215.0 24 4943.0 25 7186.0 26 9688.0 27 11291.0 28 12706.0 29 15339.0 30 19389.0 31 26076.0 32 36880.0 33 61024.0 34 90430.0 35 106014.0 36 120230.0 37 195939.0 38 266545.0 39 270344.0 40 140.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.74579224585165 4.524652489010336 54.388499465367715 16.341055799770306 2 21.43717080511663 4.192388420260584 52.27998891133024 22.090451863292543 3 20.773989148944597 4.091243911132232 52.234446160548096 22.900320779375075 4 18.622232782860085 4.679893865589482 51.721436774781196 24.97643657676924 5 17.774266365688487 7.918815096431825 49.87216347867411 24.434755059205575 6 16.36125301968239 30.79624569323987 39.807611579739415 13.034889707338323 7 82.79854263197497 2.1345689279632487 10.250524731693794 4.8163637083679856 8 84.5694031919528 2.289968714110332 8.424458437289612 4.716169656647262 9 78.96447665438993 4.4273098095124945 11.038533127400894 5.569680408696685 10 42.71910023365411 22.90198407983842 18.763692527028635 15.615223159478834 11 32.082531384895645 22.787057938299473 25.180626509841193 19.949784166963685 12 28.85929270127916 20.747930775018812 29.74915844917033 20.6436180745317 13 26.963050968278484 21.645162567819096 31.632806621519936 19.75897984238248 14 22.111441131044316 22.97231792800285 33.76872203081066 21.14751891014217 15 19.166924082214564 23.07607619500218 36.39309334283791 21.363906379945348 16 24.10336224307948 22.43831927448418 31.54797829788919 21.91034018454715 17 24.04609718426993 23.2374955447309 28.85010494633876 23.86630232466041 18 25.516850817789393 22.090847887212387 31.41388459862976 20.97841669636846 19 25.562155954219634 25.048512930180983 28.110173854500815 21.279157261098568 20 24.668646786265892 27.850698982218525 28.053225614827138 19.427428616688445 21 24.588887568809156 26.011801512811374 30.03413726189062 19.365173656488853 22 23.219674468337885 23.089144984357056 30.889232109619417 22.80194843768564 23 22.137737119322008 23.985347114965744 30.09227357332383 23.784642192388418 24 22.444101223713915 24.88638073739654 29.676052433566984 22.993465605322562 25 23.316304304780008 25.18094332897707 26.935250089105384 24.56750227713754 26 20.635301572214964 25.79501801908835 27.871292226050453 25.69838818264623 27 20.19492297334759 24.763217298324818 30.512454952279118 24.529404776048473 28 18.490594431903688 24.913627183081857 29.030850263355905 27.56492812165855 29 20.359272900083162 25.161775771256583 28.622708011563898 25.85624331709635 30 22.954021622906023 23.874064393489366 28.675299988119285 24.496613995485326 31 22.097659498633718 24.87434161023326 27.877311789632092 25.150687101500928 32 23.019761593600254 25.39875648489169 26.39523187200507 25.186250049502988 33 23.163043047800087 24.230485921349647 26.784760999564373 25.82171003128589 34 19.41491426082135 24.367034968912122 29.629321611025304 26.58872915924122 35 18.78032553166211 26.89841986455982 27.463070769474474 26.85818383430359 36 21.455942338917268 26.947051601916755 26.345887291592412 25.251118767573562 37 19.407627420696212 27.222684250128708 26.45431864084591 26.91536968832918 38 19.985980753237495 25.546314997425846 27.888400459387746 26.57930378994891 39 20.045146726862303 24.223199081224507 28.673715892439905 27.05793829947329 40 22.020434834263988 22.877351392024078 29.456892796324897 25.64532097738703 41 19.014296463506398 24.353174131717555 28.27436537166845 28.358164033107602 42 19.34038255910657 25.36596570432854 29.131044315076633 26.16260742148826 43 19.663934101619738 24.42231990812245 29.162171795176427 26.751574195081385 44 20.63910340184547 23.33665993426003 27.724763375707894 28.299473288186604 45 20.401885073858463 22.701516771613008 26.69462595540771 30.201972199120824 46 19.946457566036987 23.593837867807217 28.741356777949388 27.718347788206408 47 17.304265177616728 24.67767613163835 30.97469407152192 27.043364619223002 48 17.790107322482278 25.172310007524455 29.814502395944714 27.22308027404855 49 20.673557482871967 22.515385529285968 30.05750267316146 26.753554314680606 50 19.073383232347233 22.817234960991644 28.75006930418597 29.35931250247515 51 17.910894618034927 22.974298047602076 27.721595184349134 31.39321215001386 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 274.0 1 782.5 2 1291.0 3 5325.0 4 9359.0 5 6049.0 6 2739.0 7 2787.0 8 2835.0 9 2993.0 10 3151.0 11 3192.5 12 3234.0 13 3275.5 14 3317.0 15 3251.0 16 3185.0 17 3243.5 18 3302.0 19 3309.5 20 3317.0 21 3744.0 22 4171.0 23 4292.0 24 4413.0 25 5147.0 26 6844.5 27 7808.0 28 9433.5 29 11059.0 30 13506.5 31 15954.0 32 18907.0 33 21860.0 34 25862.5 35 29865.0 36 31408.0 37 32951.0 38 37036.0 39 41121.0 40 46218.5 41 51316.0 42 58112.5 43 64909.0 44 72066.5 45 79224.0 46 94876.0 47 110528.0 48 126507.0 49 142486.0 50 138820.5 51 135155.0 52 118963.5 53 102772.0 54 92659.5 55 82547.0 56 74687.5 57 66828.0 58 61805.0 59 56782.0 60 51272.5 61 45763.0 62 40079.5 63 34396.0 64 30007.0 65 25618.0 66 22248.0 67 18878.0 68 16373.5 69 13869.0 70 10771.5 71 7674.0 72 6433.0 73 5192.0 74 4345.5 75 2838.5 76 2178.0 77 1553.5 78 929.0 79 769.5 80 610.0 81 386.0 82 162.0 83 131.5 84 101.0 85 63.5 86 26.0 87 19.5 88 13.0 89 8.0 90 3.0 91 2.5 92 2.0 93 2.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1262550.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.41567037323403 #Duplication Level Percentage of deduplicated Percentage of total 1 72.98451271452514 26.577799573632554 2 10.836803746289531 7.8925894624861455 3 3.9064402101099147 4.267669170723292 4 2.1009912340599532 3.060360169463258 5 1.391055611823449 2.5328111315500053 6 1.0099808175685157 2.206747712151869 7 0.8412917436029306 2.144534197593735 8 0.6899567945953593 2.010019136300619 9 0.5541181831224437 1.8160726593962018 >10 5.5090089263846505 38.870867499788744 >50 0.11844802109487361 2.9305085192101186 >100 0.05260933063087564 3.3073743731489404 >500 0.0027329521098891363 0.7326498746735072 >1k 0.0020497140824168518 1.6499965198810762 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4217 0.3340065739970694 No Hit CTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTCTGCT 3022 0.2393568571541721 TruSeq Adapter, Index 13 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTCTGC 2815 0.22296146687259913 TruSeq Adapter, Index 16 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTCTGC 2386 0.1889826145499188 TruSeq Adapter, Index 16 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTCTGC 2373 0.18795295235832246 TruSeq Adapter, Index 16 (95% over 21bp) CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1527 0.12094570512058928 No Hit CGCTGTCTCTTATACACATCTGACGCACCCTCTATCGTATGCCGTCTTCTG 1281 0.10146132826422714 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.920478396895172E-5 0.0 0.0 0.25210882737317336 0.0 2 7.920478396895172E-5 0.0 0.0 0.9020632846223912 0.0 3 7.920478396895172E-5 0.0 0.0 1.3315908280860165 0.0 4 7.920478396895172E-5 0.0 0.0 1.8461843095322958 0.0 5 7.920478396895172E-5 0.0 0.0 2.721793196309057 0.0 6 7.920478396895172E-5 0.0 0.0 3.5086135202566235 0.0 7 7.920478396895172E-5 0.0 0.0 4.40045938774702 0.0 8 1.5840956793790345E-4 0.0 0.0 5.748128786978733 0.0 9 1.5840956793790345E-4 0.0 0.0 6.458199675260386 0.0 10 1.5840956793790345E-4 0.0 0.0 7.679379034493683 0.0 11 1.5840956793790345E-4 0.0 0.0 9.855847293176508 0.0 12 1.5840956793790345E-4 0.0 0.0 11.612134172904044 0.0 13 1.5840956793790345E-4 0.0 0.0 12.234842184467942 0.0 14 2.3761435190685517E-4 0.0 0.0 12.497247633757079 0.0 15 2.3761435190685517E-4 0.0 0.0 12.799176270246724 0.0 16 2.3761435190685517E-4 0.0 0.0 13.526513801433607 0.0 17 2.3761435190685517E-4 0.0 0.0 14.495188309373885 0.0 18 2.3761435190685517E-4 0.0 0.0 15.513128192942855 0.0 19 2.3761435190685517E-4 0.0 0.0 16.20632846223912 0.0 20 2.3761435190685517E-4 0.0 0.0 16.989267751772207 0.0 21 2.3761435190685517E-4 0.0 0.0 18.127044473486198 0.0 22 2.3761435190685517E-4 0.0 0.0 19.314165775612846 0.0 23 2.3761435190685517E-4 0.0 0.0 20.514039047958498 0.0 24 2.3761435190685517E-4 0.0 0.0 21.380064155875015 0.0 25 2.3761435190685517E-4 0.0 0.0 22.14573680250287 0.0 26 3.168191358758069E-4 0.0 0.0 22.839649914854856 0.0 27 3.168191358758069E-4 0.0 0.0 23.54290919171518 0.0 28 3.168191358758069E-4 0.0 0.0 24.272226842501286 0.0 29 3.168191358758069E-4 0.0 0.0 25.07686824284187 0.0 30 3.168191358758069E-4 0.0 0.0 26.012989584570906 0.0 31 3.168191358758069E-4 0.0 0.0 26.758068987366837 0.0 32 3.168191358758069E-4 0.0 0.0 27.46362520296226 0.0 33 3.168191358758069E-4 0.0 0.0 28.15421171438755 0.0 34 3.168191358758069E-4 0.0 0.0 28.907053186012437 0.0 35 3.168191358758069E-4 0.0 0.0 29.762385648093144 0.0 36 3.168191358758069E-4 0.0 0.0 30.486792602273177 0.0 37 3.168191358758069E-4 0.0 0.0 31.197893152746428 0.0 38 3.168191358758069E-4 0.0 0.0 32.017266642905234 0.0 39 3.168191358758069E-4 0.0 0.0 33.410082768999246 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 235 0.0 43.085106 1 CGTTAGG 360 0.0 42.5 2 CGTTTAT 775 0.0 41.51613 1 GTTAGGG 1775 0.0 40.94366 3 TTTAGGG 4475 0.0 40.826817 3 TTAGGGA 2230 0.0 40.56054 4 TAGGGAT 1105 0.0 40.520363 5 CGTTTTT 2165 0.0 40.2194 1 TTCAGGG 2030 0.0 40.12315 3 ATACGGA 45 1.9284926E-8 40.0 4 TTAGGGG 4425 0.0 39.966103 4 TAGGGGA 2125 0.0 39.600002 5 TTAGGGT 855 0.0 39.473686 4 AGGGCGA 855 0.0 39.473686 6 CGTAGGG 475 0.0 39.31579 3 AGGGGGG 3960 0.0 39.261364 6 CTAGGGA 1285 0.0 39.22179 4 TCGAGGG 620 0.0 39.19355 3 TAGGGCG 575 0.0 39.130436 5 TAGGGGG 3740 0.0 39.044117 5 >>END_MODULE