##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934277.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1336655 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.154221545574586 33.0 31.0 34.0 30.0 34.0 2 32.32077761277218 34.0 31.0 34.0 30.0 34.0 3 32.32359808626759 34.0 31.0 34.0 30.0 34.0 4 35.921388091916015 37.0 35.0 37.0 35.0 37.0 5 35.07120535964778 37.0 35.0 37.0 35.0 37.0 6 25.950319267125774 35.0 0.0 37.0 0.0 37.0 7 31.01587170960345 37.0 19.0 37.0 17.0 37.0 8 34.575460384317566 37.0 32.0 37.0 32.0 37.0 9 37.203767613931795 39.0 37.0 39.0 34.0 39.0 10 37.22138472530309 39.0 37.0 39.0 34.0 39.0 11 37.27363006909038 39.0 37.0 39.0 34.0 39.0 12 37.16935559287924 39.0 37.0 39.0 34.0 39.0 13 37.22493986855247 39.0 37.0 39.0 34.0 39.0 14 38.38100931055508 40.0 38.0 41.0 34.0 41.0 15 38.43568160819359 40.0 38.0 41.0 34.0 41.0 16 38.54471797135386 40.0 38.0 41.0 34.0 41.0 17 38.50050761041555 40.0 38.0 41.0 34.0 41.0 18 38.452120405040944 40.0 38.0 41.0 34.0 41.0 19 38.420754046481704 40.0 37.0 41.0 34.0 41.0 20 38.277899682416184 40.0 37.0 41.0 34.0 41.0 21 38.22384160460253 40.0 37.0 41.0 34.0 41.0 22 38.24006269381404 40.0 37.0 41.0 34.0 41.0 23 38.13069789885947 40.0 37.0 41.0 34.0 41.0 24 38.07116720470129 40.0 37.0 41.0 34.0 41.0 25 37.96967205449424 40.0 36.0 41.0 34.0 41.0 26 37.938928145258124 40.0 36.0 41.0 34.0 41.0 27 37.93834684342632 40.0 36.0 41.0 34.0 41.0 28 37.87036295828018 40.0 36.0 41.0 34.0 41.0 29 37.85542417452521 40.0 36.0 41.0 34.0 41.0 30 37.59437700827813 40.0 36.0 41.0 33.0 41.0 31 37.57164114898759 40.0 36.0 41.0 33.0 41.0 32 37.38336519146676 40.0 36.0 41.0 33.0 41.0 33 37.23096460941679 40.0 36.0 41.0 32.0 41.0 34 37.085935413401366 40.0 36.0 41.0 32.0 41.0 35 37.006334469253474 40.0 36.0 41.0 32.0 41.0 36 36.931613617575216 40.0 36.0 41.0 31.0 41.0 37 36.83518783829784 40.0 36.0 41.0 31.0 41.0 38 36.73067844731812 40.0 35.0 41.0 31.0 41.0 39 36.64668743991531 39.0 35.0 41.0 31.0 41.0 40 36.59906183719808 39.0 35.0 41.0 30.0 41.0 41 36.49727865455185 39.0 35.0 41.0 30.0 41.0 42 36.49431528704116 39.0 35.0 41.0 30.0 41.0 43 36.46096786380929 39.0 35.0 41.0 30.0 41.0 44 36.36343035413027 39.0 35.0 41.0 30.0 41.0 45 36.33503484444378 39.0 35.0 41.0 30.0 41.0 46 36.239145478825876 39.0 35.0 41.0 30.0 41.0 47 36.123738735874255 39.0 35.0 40.0 30.0 41.0 48 36.05845038547718 39.0 35.0 40.0 29.0 41.0 49 36.106670008341716 39.0 35.0 40.0 29.0 41.0 50 36.033397548357655 39.0 35.0 40.0 29.0 41.0 51 35.03786766218658 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 2.0 11 6.0 12 3.0 13 7.0 14 6.0 15 14.0 16 29.0 17 75.0 18 188.0 19 478.0 20 904.0 21 1646.0 22 2771.0 23 4602.0 24 7503.0 25 11898.0 26 15009.0 27 15324.0 28 14526.0 29 15615.0 30 18873.0 31 24761.0 32 34705.0 33 50901.0 34 75280.0 35 101888.0 36 131805.0 37 214712.0 38 294522.0 39 298494.0 40 105.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.3848599676057 3.9375156641018068 54.493867153453955 16.183757214838536 2 22.188747283330404 9.343547886328185 49.22541717945169 19.242287650889722 3 17.1914218702657 9.27120311523916 53.69119181838246 19.846183196112683 4 16.139766805944692 3.378732732081203 58.605848180719775 21.875652281254325 5 19.526504595426644 7.021781985628303 51.8139684510962 21.637744967848846 6 13.480067781140233 33.2568987509866 40.89147910268544 12.371554365187725 7 75.9285679550819 1.0310065050443085 17.962301416595906 5.078124123277885 8 76.69450980245463 4.627222432115992 12.880361798669066 5.797905966760308 9 72.65270395128137 3.2979340218680218 14.314538904953036 9.734823121897572 10 35.69185765960551 27.453082508201444 22.16144031182317 14.693619520369877 11 23.86457238404824 23.99781544227942 31.36127123304069 20.776340940631652 12 20.457186035289585 20.87060610254703 35.500783672675446 23.171424189487936 13 21.340136385230295 22.520321249686717 38.575099782666435 17.564442582416554 14 19.445705885213464 26.24536623137608 34.08082115429935 20.228106729111104 15 15.434723245714116 25.0588222091714 39.197324664928495 20.309129880185985 16 16.979100815094398 26.773625206205043 32.588962746557634 23.65831123214292 17 17.87364727622311 26.60364866027509 32.81677022118647 22.705933842315332 18 17.681151830502262 25.26306339332139 34.406933726354225 22.64885104982213 19 18.10048217378456 27.959495905824618 32.10394604441685 21.83607587597398 20 18.64759418099659 28.577157157232048 34.052391978483605 18.72285668328776 21 19.35495696346477 29.851307929121575 32.69026038880639 18.10347471860727 22 18.119335206167637 24.71378179111289 32.529635545447405 24.63724745727207 23 17.308205931971976 28.597132393923637 31.030295775648913 23.06436589845547 24 19.160366736368022 25.552816545780328 31.06007159663488 24.22674512121677 25 17.543045886934173 30.057868335509163 28.85239646730084 23.546689310255825 26 16.704235573128443 26.683250352559185 32.6273421339089 23.98517194040347 27 19.44383554469927 26.527712835398816 32.317538931137804 21.710912688764118 28 16.813463459157376 24.701886425442616 35.08048075232577 23.404169363074242 29 17.45446656018195 21.85044009112299 36.74949781357194 23.945595535123125 30 19.95758067713808 24.270959970972314 36.681417418855276 19.09004193303433 31 22.407876377973373 24.85877058777321 31.669428536159295 21.06392449809412 32 19.208696335254796 26.725071166456566 32.483849609659934 21.582382888628704 33 19.463810781390862 23.35651308677258 32.181602582566185 24.99807354927038 34 21.641485648877236 22.230119215504374 32.010728273189414 24.117666862428973 35 16.894187355749988 22.163385465957933 33.61151531247779 27.33091186581429 36 19.618749789586694 22.673389917368354 34.11441246993427 23.593447823110676 37 19.686306488959378 23.213319817005885 35.596769547863886 21.50360414617085 38 20.140200724943984 23.747863135962533 32.23359804886077 23.87833809023271 39 20.828486034167383 22.762118871361718 34.30099763963027 22.108397454840627 40 20.53027894258429 22.054756088893544 33.80146709509933 23.613497873422833 41 20.957913597749606 23.19476603910508 28.14323815793903 27.704082205206284 42 19.045078947073105 22.089918490560393 31.01578193325877 27.849220629107734 43 20.015561233078095 21.816025825661818 31.17640677661775 26.992006164642333 44 20.015112351354688 22.237076882217178 31.540225413438773 26.207585352989366 45 20.28257104488443 20.924845977458656 30.993861542432416 27.7987214352245 46 23.366912180031495 22.032760884446624 31.87494155185893 22.72538538366295 47 17.475788442043758 21.707920143941408 37.040672424821665 23.775618989193173 48 18.92762156278172 22.664412282900226 32.97140997490003 25.436556179418023 49 20.176560144539916 19.450269516068094 36.10744732185942 24.265723017532572 50 20.94310050087719 18.642880922900822 33.30672462228473 27.107293953937255 51 18.829166838114546 18.854902723589856 30.46799660346163 31.84793383483397 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 172.0 1 392.0 2 612.0 3 9930.0 4 19248.0 5 12354.0 6 5460.0 7 5581.0 8 5702.0 9 6270.5 10 6839.0 11 7459.0 12 8079.0 13 8217.0 14 8355.0 15 8164.0 16 7973.0 17 7738.5 18 7504.0 19 7220.5 20 6937.0 21 6685.5 22 6434.0 23 6351.0 24 6268.0 25 6749.5 26 8453.5 27 9676.0 28 11325.0 29 12974.0 30 14939.0 31 16904.0 32 19317.0 33 21730.0 34 26030.0 35 30330.0 36 34565.0 37 38800.0 38 44620.0 39 50440.0 40 57957.0 41 65474.0 42 75552.5 43 85631.0 44 101766.0 45 117901.0 46 166823.5 47 215746.0 48 202549.5 49 189353.0 50 170589.5 51 151826.0 52 119184.0 53 86542.0 54 69557.5 55 52573.0 56 43832.0 57 35091.0 58 28875.5 59 22660.0 60 18944.5 61 15229.0 62 12239.5 63 9250.0 64 7319.0 65 5388.0 66 4115.5 67 2843.0 68 2150.5 69 1458.0 70 1187.5 71 917.0 72 729.5 73 542.0 74 434.5 75 206.0 76 85.0 77 69.5 78 54.0 79 58.5 80 63.0 81 43.5 82 24.0 83 14.5 84 5.0 85 4.0 86 3.0 87 2.0 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1336655.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.89009109792438 #Duplication Level Percentage of deduplicated Percentage of total 1 73.87922842678309 30.209283806155252 2 12.20133311541419 9.978272452108158 3 4.353704356158237 5.340701032102216 4 2.2380764863079703 3.660606056370217 5 1.3542336523228118 2.7687368705677318 6 0.9806171698127123 2.4058515243498353 7 0.6946845478446405 1.9884000111981437 8 0.577840144342474 1.8902348913761229 9 0.4648465267288614 1.7106855142047201 >10 3.0800080391746065 21.946410313763284 >50 0.10731629803383504 3.071436626612454 >100 0.05807785575840314 4.267870278655798 >500 0.004244892096169409 1.1701256170707546 >1k 0.004437841736904382 4.169484760659306 >5k 5.788489222049195E-4 1.2778993068366942 >10k+ 7.717985629398926E-4 4.14400093796941 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGC 16044 1.2003097283891504 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCG 13991 1.0467173653635382 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTC 11854 0.8868406582102337 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10635 0.7956428547381336 No Hit CTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGCT 5917 0.44267219289943927 TruSeq Adapter, Index 14 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGC 5166 0.3864871638530511 TruSeq Adapter, Index 21 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGC 5114 0.3825968555835275 TruSeq Adapter, Index 21 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGC 4244 0.31750900568957585 TruSeq Adapter, Index 21 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCT 3880 0.29027684780291096 No Hit GAATCAGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTC 3873 0.2897531524589367 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTC 3855 0.288406507288717 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3774 0.2823466040227284 No Hit CGCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTG 3570 0.2670846254269052 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTGTTGCCT 2825 0.2113484781039236 No Hit GAACTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCT 2764 0.20678484724929022 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTA 2754 0.2060367110436126 No Hit CGTTCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTC 1921 0.14371696511066806 No Hit CTGTCACTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGCT 1833 0.13713336650070512 TruSeq Adapter, Index 14 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTG 1787 0.13369193995458814 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCC 1772 0.13256973564607172 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTT 1709 0.12785647755030283 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCT 1682 0.12583650979497327 No Hit GCTGTATCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGC 1616 0.12089881083750108 TruSeq Adapter, Index 14 (95% over 21bp) TCTGTATCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGC 1518 0.11356707602186054 TruSeq Adapter, Index 14 (95% over 21bp) CGTCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCT 1459 0.10915307240836267 No Hit CCTGTATCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCTGC 1422 0.10638496844735552 TruSeq Adapter, Index 14 (95% over 21bp) TTCCTGTCTCTTATACACATCTGACGCTTGTTGCCTCGTATGCCGTCTTCT 1380 0.10324279638350958 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.46324593855557344 0.0 2 0.0 0.0 0.0 1.6290665878629864 0.0 3 0.0 0.0 0.0 2.3923151448952797 0.0 4 0.0 0.0 0.0 3.4065633989324096 0.0 5 0.0 0.0 0.0 5.6535156790645305 0.0 6 0.0 0.0 0.0 6.856069816070714 0.0 7 0.0 0.0 0.0 8.472717342919452 0.0 8 0.0 0.0 0.0 10.641863457661103 0.0 9 0.0 0.0 0.0 11.532145542417453 0.0 10 0.0 0.0 0.0 14.144637172643652 0.0 11 0.0 0.0 0.0 17.139501217591675 0.0 12 0.0 0.0 0.0 21.0530765231118 0.0 13 0.0 0.0 0.0 22.073459494035482 0.0 14 0.0 0.0 0.0 22.463687338916923 0.0 15 0.0 0.0 0.0 23.05381717795542 0.0 16 0.0 0.0 0.0 23.94709180753448 0.0 17 0.0 0.0 0.0 25.248474737310676 0.0 18 7.481362056776057E-5 0.0 0.0 26.655120431225708 0.0 19 7.481362056776057E-5 0.0 0.0 27.954184138764305 0.0 20 7.481362056776057E-5 0.0 0.0 29.025141117191797 0.0 21 7.481362056776057E-5 0.0 0.0 30.495752456692266 0.0 22 7.481362056776057E-5 0.0 0.0 32.1374625464312 0.0 23 7.481362056776057E-5 0.0 0.0 33.708024883010204 0.0 24 7.481362056776057E-5 0.0 0.0 34.85057849632104 0.0 25 7.481362056776057E-5 0.0 0.0 35.781185122563414 0.0 26 7.481362056776057E-5 0.0 0.0 36.643112845124584 0.0 27 1.4962724113552113E-4 0.0 0.0 37.48828231667857 0.0 28 1.4962724113552113E-4 0.0 0.0 38.37587111109448 0.0 29 1.4962724113552113E-4 0.0 0.0 39.31253764060285 0.0 30 1.4962724113552113E-4 0.0 0.0 40.341449364271256 0.0 31 2.244408617032817E-4 0.0 0.0 41.279238098088136 0.0 32 2.244408617032817E-4 0.0 0.0 42.10533009639735 0.0 33 2.244408617032817E-4 0.0 0.0 42.91773120214266 0.0 34 2.244408617032817E-4 0.0 0.0 43.725793117895044 0.0 35 2.244408617032817E-4 0.0 0.0 44.61218489438187 0.0 36 2.244408617032817E-4 0.0 0.0 45.43865096079392 0.0 37 2.244408617032817E-4 0.0 0.0 46.22307177244689 0.0 38 2.244408617032817E-4 0.0 0.0 47.03958762732343 0.0 39 2.244408617032817E-4 0.0 0.0 47.930318593803186 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGTCA 20 7.033699E-4 45.000004 23 CGAGTGG 25 3.8911472E-5 45.000004 38 CGTGCGA 20 7.033699E-4 45.000004 13 GCGCGAG 20 7.033699E-4 45.000004 1 CCGGCGA 50 2.1827873E-11 45.000004 8 TAGCGCG 20 7.033699E-4 45.000004 1 TTATCCG 40 6.8157533E-9 45.000004 1 ACGGATA 20 7.033699E-4 45.000004 20 TTGCGAT 20 7.033699E-4 45.000004 1 ACTCGGT 20 7.033699E-4 45.000004 12 CGACTAT 25 3.8911472E-5 45.000004 25 TCGACGG 40 6.8157533E-9 45.000004 2 ATTCGCG 45 3.8562575E-10 45.0 1 CCGCTAG 45 3.8562575E-10 45.0 1 TCCGTAG 35 1.21212E-7 45.0 1 CCGTAGG 55 1.8189894E-12 44.999996 2 ATGCGCG 30 2.1657688E-6 44.999996 12 CGTTTAT 2150 0.0 44.372093 1 CGTTTTT 5040 0.0 43.794643 1 CGCTGAC 125 0.0 43.199997 1 >>END_MODULE