##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934274.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1060383 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19638375945295 33.0 31.0 34.0 30.0 34.0 2 32.363983579517964 34.0 31.0 34.0 30.0 34.0 3 32.40852503293621 34.0 31.0 34.0 30.0 34.0 4 35.94140984908283 37.0 35.0 37.0 35.0 37.0 5 35.0595954480598 37.0 35.0 37.0 35.0 37.0 6 25.972621213278597 36.0 0.0 37.0 0.0 37.0 7 31.04985368494214 37.0 19.0 37.0 17.0 37.0 8 34.7343176946443 37.0 32.0 37.0 32.0 37.0 9 37.2536272271434 39.0 37.0 39.0 35.0 39.0 10 37.15869643326987 39.0 37.0 39.0 34.0 39.0 11 37.20373016164914 39.0 37.0 39.0 34.0 39.0 12 37.13321318806506 39.0 37.0 39.0 34.0 39.0 13 37.2110925957885 39.0 37.0 39.0 34.0 39.0 14 38.35807062165274 40.0 38.0 41.0 34.0 41.0 15 38.473612836116764 40.0 38.0 41.0 34.0 41.0 16 38.51800905899095 40.0 38.0 41.0 34.0 41.0 17 38.52190765034898 40.0 38.0 41.0 34.0 41.0 18 38.499734529882126 40.0 38.0 41.0 34.0 41.0 19 38.50842761530504 40.0 38.0 41.0 34.0 41.0 20 38.4229207748521 40.0 38.0 41.0 34.0 41.0 21 38.32488638539094 40.0 37.0 41.0 34.0 41.0 22 38.32016827882001 40.0 37.0 41.0 34.0 41.0 23 38.23081565811598 40.0 37.0 41.0 34.0 41.0 24 38.17461803895385 40.0 37.0 41.0 34.0 41.0 25 38.055485612274055 40.0 37.0 41.0 34.0 41.0 26 38.032903205728495 40.0 37.0 41.0 34.0 41.0 27 38.03338982235664 40.0 37.0 41.0 34.0 41.0 28 37.9918840645314 40.0 37.0 41.0 34.0 41.0 29 37.980987058449635 40.0 37.0 41.0 34.0 41.0 30 37.732152439260155 40.0 37.0 41.0 33.0 41.0 31 37.73798712352046 40.0 37.0 41.0 33.0 41.0 32 37.63597021076347 40.0 36.0 41.0 33.0 41.0 33 37.57151425475512 40.0 37.0 41.0 33.0 41.0 34 37.53469642572542 40.0 37.0 41.0 33.0 41.0 35 37.48516243659131 40.0 37.0 41.0 33.0 41.0 36 37.440480467906404 40.0 37.0 41.0 33.0 41.0 37 37.360648935337515 40.0 36.0 41.0 33.0 41.0 38 37.19874988565452 40.0 36.0 41.0 32.0 41.0 39 37.1461952898151 40.0 36.0 41.0 32.0 41.0 40 37.138650845967916 39.0 36.0 41.0 32.0 41.0 41 37.064358821293816 39.0 36.0 41.0 32.0 41.0 42 37.01650252786022 39.0 36.0 41.0 31.0 41.0 43 36.98594281500175 39.0 36.0 41.0 31.0 41.0 44 36.86628699253006 39.0 35.0 41.0 31.0 41.0 45 36.84109892369078 39.0 35.0 41.0 31.0 41.0 46 36.76696156011554 39.0 35.0 41.0 31.0 41.0 47 36.69369463674917 39.0 35.0 40.0 31.0 41.0 48 36.65869690479761 39.0 35.0 40.0 31.0 41.0 49 36.65651561747029 39.0 35.0 40.0 31.0 41.0 50 36.56463749418842 39.0 35.0 40.0 31.0 41.0 51 35.57934444441301 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 3.0 11 4.0 12 2.0 13 5.0 14 4.0 15 12.0 16 26.0 17 51.0 18 119.0 19 234.0 20 436.0 21 749.0 22 1340.0 23 2286.0 24 3756.0 25 5808.0 26 7628.0 27 8513.0 28 9635.0 29 11453.0 30 14760.0 31 19462.0 32 26409.0 33 39808.0 34 59135.0 35 81955.0 36 107980.0 37 178773.0 38 244532.0 39 235412.0 40 90.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.170008383763225 4.219230221533163 59.07431560106112 14.536445793642486 2 20.657253086856354 3.6992294293665595 53.85384337545962 21.789674108317467 3 18.666180050038523 3.7060194288290176 55.3582997841346 22.26950073699786 4 17.58987082969078 3.937068021648782 54.67854539350404 23.794515755156393 5 16.622861739579 7.444574271748981 53.288481614661876 22.644082374010146 6 14.84642813021333 30.617333548349983 41.94663626255796 12.589602058878727 7 82.50103971866768 1.260676566863105 11.265080635958894 4.973203078510312 8 84.49088678336035 1.2608651779592845 8.865381659268397 5.3828663794119676 9 79.43837273890661 4.154913837735988 11.202178835383064 5.204534587974345 10 36.12166547370148 29.78395541988131 19.858673705632775 14.235705400784434 11 22.675014593783565 26.364624857244976 29.86741582994069 21.092944719030765 12 20.58888156449132 22.199054492574852 34.912668347191534 22.299395595742293 13 21.56579273715252 24.74596442983337 35.360619700617605 18.327623132396504 14 19.569061367449308 26.76202843689497 33.24147972949397 20.427430466161756 15 17.11032711765466 26.317094861007767 35.865531605089856 20.707046416247714 16 18.22813077916187 27.109450076057424 32.23325911486698 22.42916002991372 17 18.609313804540434 27.190175625222206 30.142127891525988 24.05838267871137 18 19.097345015904633 25.358290353579793 33.59097609071439 21.953388539801185 19 19.796526349441663 28.11757638513631 31.344052101929208 20.741845163492815 20 20.582185870576954 28.507624132035314 30.728708400643917 20.18148159674382 21 20.835113350553527 28.41416733387842 31.963073719589996 18.787645595978056 22 20.20581242815096 26.062752797809846 29.876846384749662 23.85458838928953 23 18.78245879083312 27.395950331153934 29.059122977263875 24.76246790074907 24 20.02031341505852 26.8651987065051 29.90928749329252 23.205200385143858 25 18.64005741321768 28.336742478896777 27.94094209356431 25.08225801432124 26 17.701528598628986 28.430765110342204 29.24622518467384 24.621481106354967 27 18.735777544528723 26.58313081216881 29.913248326312285 24.76784331699018 28 16.300336765112228 25.9350630856964 30.663071739173485 27.101528410017888 29 16.751117284980992 24.45446598068811 30.774446591467424 28.019970142863475 30 19.717121077950136 25.68109824469083 29.54026988361752 25.06151079374151 31 19.749373575396813 27.872287654555006 26.861237873485333 25.517100896562845 32 17.860904974900578 28.868720075670772 27.58418420514097 25.68619074428768 33 18.800093928325897 25.889041978228622 28.98452728872492 26.326336804720558 34 17.93861274652649 24.999646354194663 29.60345460083762 27.458286298441227 35 16.764980200550177 25.027655101977302 29.470389472483056 28.736975224989465 36 18.11468120480996 24.816127757612108 30.014438179412533 27.054752858165397 37 17.654753046776495 26.262114726471474 30.189186360022745 25.893945866729283 38 16.867301720227506 28.199150684233903 30.28905593544974 24.644491660088853 39 18.729647683902893 26.214584730234264 32.72534546479904 22.330422121063805 40 21.635295926094628 23.583648549627824 32.06058565631474 22.7204698679628 41 19.28265541790089 23.0757188676167 31.289354884037184 26.352270830445224 42 18.74520809933769 23.161348305282146 31.68977624122605 26.403667354154116 43 18.58941533389351 23.338076902402243 31.714389989277457 26.358117774426788 44 18.134956897649246 25.007662325782288 28.18160985228922 28.67577092427925 45 20.26918575646724 23.256219686660387 27.112467853596296 29.362126703276083 46 21.07870458126922 23.219912050645853 29.272253515946595 26.429129852138335 47 17.149935447852332 23.730953815743934 31.83698720179407 27.282123534609664 48 17.057327399628246 23.60364132582284 31.962602191849548 27.376429082699367 49 19.257853058753298 21.673301061974776 33.31022847405136 25.75861740522057 50 19.896395924868656 21.000053754162412 31.107816703964513 27.99573361700442 51 18.18418439375207 20.695541139380772 29.70775653702483 31.41251792984233 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 97.0 1 294.0 2 491.0 3 3983.5 4 7476.0 5 4862.0 6 2248.0 7 2351.0 8 2454.0 9 2816.0 10 3178.0 11 3453.0 12 3728.0 13 3889.5 14 4051.0 15 3987.0 16 3923.0 17 3877.5 18 3832.0 19 3693.5 20 3555.0 21 3523.5 22 3492.0 23 3981.0 24 4470.0 25 4985.0 26 7045.5 27 8591.0 28 9451.0 29 10311.0 30 12787.5 31 15264.0 32 17882.5 33 20501.0 34 23691.5 35 26882.0 36 30586.5 37 34291.0 38 38048.5 39 41806.0 40 47984.5 41 54163.0 42 62728.5 43 71294.0 44 81793.0 45 92292.0 46 109736.5 47 127181.0 48 141915.0 49 156649.0 50 142698.5 51 128748.0 52 105272.5 53 81797.0 54 66876.0 55 51955.0 56 42796.0 57 33637.0 58 28125.5 59 22614.0 60 18191.5 61 13769.0 62 11474.5 63 9180.0 64 7075.5 65 4971.0 66 3846.0 67 2721.0 68 2022.0 69 1323.0 70 1089.0 71 855.0 72 659.0 73 463.0 74 396.5 75 238.0 76 146.0 77 100.5 78 55.0 79 48.0 80 41.0 81 32.5 82 24.0 83 23.5 84 23.0 85 15.0 86 7.0 87 4.5 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1060383.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.69902227885585 #Duplication Level Percentage of deduplicated Percentage of total 1 72.87140218882892 31.115376255522715 2 12.17214873101187 10.394776996940456 3 4.517335520559867 5.78657430100358 4 2.388379077643614 4.079258057866313 5 1.4889974889410058 3.178936847672621 6 1.0584135866083233 2.711593518889951 7 0.7921471341767473 2.3676735691241326 8 0.6170753489310921 2.1078811257393153 9 0.5093842621064231 1.9575188960562637 >10 3.4244004653943527 25.441580075403873 >50 0.1028856724889468 3.0465559228535866 >100 0.05132570398198652 3.956967847704196 >500 0.0029393574536633353 0.8369431995416877 >1k 0.0031654618731758997 3.0183633856813152 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGCT 4138 0.3902363579951772 Illumina Paired End PCR Primer 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGC 4093 0.38599260833114074 TruSeq Adapter, Index 14 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGC 3913 0.36901760967499475 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3869 0.364868165559048 No Hit GCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGC 2946 0.2778241446722552 TruSeq Adapter, Index 14 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTG 1774 0.16729804231112722 No Hit TCCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTG 1645 0.15513262660755595 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1441 0.1358942947972572 No Hit TCTGTATCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGC 1396 0.13165054513322072 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCC 1332 0.12561499005547996 No Hit GCTGTATCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGC 1268 0.11957943497773918 No Hit TTCCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCT 1216 0.11467554647707479 No Hit CTGTCACTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGCT 1145 0.1079798525627061 Illumina Paired End PCR Primer 2 (95% over 21bp) CCTGTATCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGC 1088 0.10260443632159325 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.82916644269099E-4 0.0 0.0 0.4162646892679343 0.0 2 2.82916644269099E-4 0.0 0.0 1.542367239007038 0.0 3 2.82916644269099E-4 0.0 0.0 2.3067137062740537 0.0 4 2.82916644269099E-4 0.0 0.0 3.1446185010510352 0.0 5 2.82916644269099E-4 0.0 0.0 4.530910057969621 0.0 6 2.82916644269099E-4 0.0 0.0 5.552333449329158 0.0 7 2.82916644269099E-4 0.0 0.0 6.779908768812778 0.0 8 2.82916644269099E-4 0.0 0.0 8.790220137440906 0.0 9 3.772221923587987E-4 0.0 0.0 9.653870346846375 0.0 10 3.772221923587987E-4 0.0 0.0 11.214627167730905 0.0 11 3.772221923587987E-4 0.0 0.0 14.335386365115246 0.0 12 3.772221923587987E-4 0.0 0.0 16.983391849925923 0.0 13 3.772221923587987E-4 0.0 0.0 17.884669973019182 0.0 14 3.772221923587987E-4 0.0 0.0 18.167586617288283 0.0 15 4.715277404484983E-4 0.0 0.0 18.53613269922283 0.0 16 4.715277404484983E-4 0.0 0.0 19.464099292425473 0.0 17 4.715277404484983E-4 0.0 0.0 20.961577090541812 0.0 18 4.715277404484983E-4 0.0 0.0 22.52601182780184 0.0 19 4.715277404484983E-4 0.0 0.0 23.643815489309052 0.0 20 5.65833288538198E-4 0.0 0.0 24.70305540545256 0.0 21 5.65833288538198E-4 0.0 0.0 26.284182224724464 0.0 22 5.65833288538198E-4 0.0 0.0 27.975363618617045 0.0 23 5.65833288538198E-4 0.0 0.0 29.722373896978734 0.0 24 6.601388366278976E-4 0.0 0.0 30.96664129847423 0.0 25 6.601388366278976E-4 0.0 0.0 32.0014560776625 0.0 26 6.601388366278976E-4 0.0 0.0 32.952810446791396 0.0 27 6.601388366278976E-4 0.0 0.0 33.88068273444595 0.0 28 6.601388366278976E-4 0.0 0.0 34.85382168518356 0.0 29 6.601388366278976E-4 0.0 0.0 35.84742493985664 0.0 30 7.544443847175974E-4 0.0 0.0 36.90732499483677 0.0 31 8.48749932807297E-4 0.0 0.0 37.91912922029116 0.0 32 8.48749932807297E-4 0.0 0.0 38.82003012119206 0.0 33 8.48749932807297E-4 0.0 0.0 39.71678157797702 0.0 34 8.48749932807297E-4 0.0 0.0 40.59731248049054 0.0 35 8.48749932807297E-4 0.0 0.0 41.565170320535124 0.0 36 8.48749932807297E-4 0.0 0.0 42.45796094430031 0.0 37 8.48749932807297E-4 0.0 0.0 43.32472323679274 0.0 38 8.48749932807297E-4 0.0 0.0 44.18214928002429 0.0 39 8.48749932807297E-4 0.0 0.0 45.104646151437734 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGGACG 90 0.0 45.000004 6 TCACCCG 25 3.8906008E-5 45.0 28 CACGGGT 25 3.8906008E-5 45.0 4 ACGTTAG 25 3.8906008E-5 45.0 1 GCGCGAC 35 1.2118107E-7 45.0 9 GGCGTAC 20 7.0330396E-4 45.0 9 AGGCGAT 70 0.0 45.0 6 ACGATTA 20 7.0330396E-4 45.0 10 CCCGTAG 20 7.0330396E-4 45.0 1 TGCGATT 20 7.0330396E-4 45.0 44 AGTTGCG 20 7.0330396E-4 45.0 1 CTTGCGA 25 3.8906008E-5 45.0 20 CCGAGTA 20 7.0330396E-4 45.0 16 TCGCTAG 35 1.2118107E-7 45.0 1 GGAACGT 20 7.0330396E-4 45.0 8 CGAATAT 25 3.8906008E-5 45.0 14 GACGATT 25 3.8906008E-5 45.0 9 TATCGCT 20 7.0330396E-4 45.0 3 GCGTACC 20 7.0330396E-4 45.0 10 AACCGTG 30 2.1653432E-6 44.999996 38 >>END_MODULE