##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934271.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 728975 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.32649953702116 33.0 31.0 34.0 31.0 34.0 2 32.49541067937858 34.0 31.0 34.0 31.0 34.0 3 32.55236324976851 34.0 31.0 34.0 31.0 34.0 4 36.034206934394184 37.0 35.0 37.0 35.0 37.0 5 35.17221578243424 37.0 35.0 37.0 35.0 37.0 6 26.137088377516374 37.0 0.0 37.0 0.0 37.0 7 31.12448986590761 37.0 19.0 37.0 17.0 37.0 8 34.73020473953154 37.0 32.0 37.0 32.0 37.0 9 37.24551184882883 39.0 37.0 39.0 34.0 39.0 10 37.35671868033883 39.0 37.0 39.0 34.0 39.0 11 37.42303919887513 39.0 37.0 39.0 35.0 39.0 12 37.16091086799959 39.0 37.0 39.0 34.0 39.0 13 37.139542508316474 39.0 37.0 39.0 33.0 39.0 14 38.29463150313797 40.0 37.0 41.0 34.0 41.0 15 38.42103501491821 40.0 38.0 41.0 34.0 41.0 16 38.49177269453685 40.0 38.0 41.0 35.0 41.0 17 38.47432079289413 40.0 38.0 41.0 34.0 41.0 18 38.45281799787373 40.0 37.0 41.0 34.0 41.0 19 38.45846428203985 40.0 37.0 41.0 34.0 41.0 20 38.38772660242121 40.0 37.0 41.0 34.0 41.0 21 38.283650330944134 40.0 37.0 41.0 34.0 41.0 22 38.28297266710106 40.0 37.0 41.0 34.0 41.0 23 38.24693302239446 40.0 37.0 41.0 34.0 41.0 24 38.204562570732875 40.0 37.0 41.0 34.0 41.0 25 38.09654103364313 40.0 36.0 41.0 34.0 41.0 26 38.05604993312528 40.0 36.0 41.0 34.0 41.0 27 38.05302513803628 40.0 36.0 41.0 34.0 41.0 28 37.97179464316335 40.0 36.0 41.0 34.0 41.0 29 37.940067903563225 40.0 36.0 41.0 34.0 41.0 30 37.72356116464899 40.0 36.0 41.0 33.0 41.0 31 37.7300936246099 40.0 36.0 41.0 33.0 41.0 32 37.67508213587572 40.0 36.0 41.0 33.0 41.0 33 37.58020782605713 40.0 36.0 41.0 33.0 41.0 34 37.444703865015946 40.0 36.0 41.0 33.0 41.0 35 37.421100860797694 40.0 35.0 41.0 33.0 41.0 36 37.37136801673583 40.0 35.0 41.0 33.0 41.0 37 37.271784354744675 39.0 35.0 41.0 33.0 41.0 38 37.18832607428238 39.0 35.0 41.0 33.0 41.0 39 37.16937069172468 39.0 35.0 41.0 33.0 41.0 40 37.076296169278784 39.0 35.0 41.0 32.0 41.0 41 37.031032614287184 39.0 35.0 41.0 32.0 41.0 42 36.999960218114474 39.0 35.0 41.0 32.0 41.0 43 36.873681539147434 39.0 35.0 41.0 32.0 41.0 44 36.72873280976714 39.0 35.0 41.0 31.0 41.0 45 36.7527034534792 39.0 35.0 41.0 31.0 41.0 46 36.71789567543468 39.0 35.0 41.0 31.0 41.0 47 36.67451147158682 39.0 35.0 41.0 31.0 41.0 48 36.657428581227066 39.0 35.0 41.0 31.0 41.0 49 36.62198703659248 39.0 35.0 40.0 31.0 41.0 50 36.5261209232141 39.0 35.0 40.0 31.0 41.0 51 35.57041050790494 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 12.0 10 8.0 11 3.0 12 10.0 13 5.0 14 9.0 15 9.0 16 24.0 17 53.0 18 74.0 19 197.0 20 313.0 21 533.0 22 888.0 23 1311.0 24 2084.0 25 3213.0 26 4407.0 27 5616.0 28 6436.0 29 7661.0 30 9930.0 31 13116.0 32 18237.0 33 31148.0 34 46949.0 35 64095.0 36 68281.0 37 114010.0 38 161257.0 39 168990.0 40 95.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.568469426249184 4.3728522926026265 52.931719194759765 18.12695908638842 2 20.3469254775541 4.791659521931479 52.91141671525087 21.949998285263554 3 20.06323948009191 4.9457114441510335 51.988065434342744 23.002983641414314 4 19.758839466374017 4.719366233409924 51.17212524434994 24.349669055866112 5 17.661511025755342 8.041702390342605 49.10826845913783 25.188518124764226 6 15.643609177269454 31.454302273740524 39.4695291333722 13.43255941561782 7 81.72721972632806 2.3126993381117322 10.855104770396789 5.104976165163414 8 81.94341369731472 3.144689461229809 9.001131726053705 5.910765115401763 9 76.73527898761961 4.901677012243218 11.782708597688535 6.580335402448643 10 39.52892760382729 25.88154600637882 19.196680270242464 15.392846119551425 11 28.972186974861962 25.22637950547001 26.290201995953222 19.511231523714805 12 28.563942522034363 20.097259851160874 31.956239925923384 19.382557700881375 13 24.206591446894613 23.537844233341335 31.655406564011113 20.60015775575294 14 19.292431153331734 26.4485064645564 31.651702733289895 22.607359648821976 15 17.696354470317914 24.36517027332899 36.5297849720498 21.408690284303304 16 19.833190438629583 23.83044686031757 33.25354093075894 23.082821770293908 17 19.095030693782366 24.426214890771288 30.27524949415275 26.203504921293597 18 20.949826811619054 24.134298158373056 32.41194828354882 22.50392674645907 19 22.32449672485339 25.685654514901056 30.354401728454338 21.635447031791212 20 25.258342192804967 25.735724819095307 29.95479954730958 19.05113344079015 21 24.265441201687302 26.53300867656641 29.292499742789534 19.909050378956756 22 21.43914400356665 24.758050687609316 29.32418807229329 24.478617236530745 23 21.07123015192565 25.799101478102816 28.535683665420624 24.593984704550913 24 22.647964607839775 23.194348228677253 30.55920984944614 23.598477314036835 25 20.38382660585068 24.644329366576358 28.3065948763675 26.66524915120546 26 18.38362083747728 27.361294968963268 29.527761583044686 24.72732261051476 27 19.570355636338697 26.216125381528858 30.487053739840185 23.72646524229226 28 16.971912617030764 25.476456668610037 33.31979834699407 24.231832367365136 29 18.247813711032617 24.743509722555643 32.41455468294523 24.59412188346651 30 20.732946946054394 25.070818615178847 29.876881923248394 24.319352515518364 31 21.36108920058987 27.85445317054769 27.586817106210777 23.197640522651668 32 22.515586954285126 27.76926506395967 26.639596693988132 23.07555128776707 33 23.58379917006756 25.40649542165369 26.237525292362562 24.772180115916186 34 20.413457251620425 24.584519359374465 29.819815494358515 25.18220789464659 35 20.052127987928255 24.593298809972907 29.12431839226311 26.230254809835728 36 21.49826811619054 25.535717960149523 28.682602284028945 24.283411639630987 37 19.74059467059913 27.065674405843822 30.392949003738124 22.800781919818924 38 20.094790630680066 28.435680235947736 27.687917967008467 23.78161116636373 39 21.574128056517715 26.085256696045818 27.812887959120687 24.527727288315788 40 22.211186940567234 25.423779965019378 28.66092801536404 23.704105079049352 41 20.837888816488906 24.892486024897973 27.997942316265988 26.271682842347133 42 23.94910662231215 22.793785795123288 27.585719674885972 25.67138790767859 43 22.727528378888167 23.060324428135395 28.672862581021295 25.539284611955143 44 19.96131554580061 23.875578723550188 28.719640591241124 27.443465139408076 45 20.098905998148084 23.91892726088 27.645118145341062 28.337048595630854 46 21.14928495490243 24.708940635824273 29.38001989094276 24.761754518330534 47 18.785006344524845 24.56476559552797 31.676943653760414 24.973284406186767 48 19.6936794814637 23.104770396790013 31.58750300078878 25.614047120957512 49 21.346959772283 21.979354573202098 31.921670839192018 24.752014815322884 50 20.563942522034363 22.148084639390923 29.92352275455262 27.364450084022085 51 19.4079358002675 22.306663465825302 27.678864158578826 30.606536575328374 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 222.0 1 535.5 2 849.0 3 3279.0 4 5709.0 5 3665.5 6 1622.0 7 1611.5 8 1601.0 9 1748.5 10 1896.0 11 1970.5 12 2045.0 13 2048.5 14 2052.0 15 1906.0 16 1760.0 17 1774.0 18 1788.0 19 1918.5 20 2049.0 21 1870.0 22 1691.0 23 2020.5 24 2350.0 25 3088.5 26 5145.0 27 6463.0 28 6914.5 29 7366.0 30 8896.5 31 10427.0 32 12802.5 33 15178.0 34 16958.0 35 18738.0 36 19315.0 37 19892.0 38 22852.0 39 25812.0 40 30393.5 41 34975.0 42 39885.5 43 44796.0 44 49371.0 45 53946.0 46 62331.0 47 70716.0 48 79945.5 49 89175.0 50 84704.0 51 80233.0 52 66697.0 53 53161.0 54 45360.0 55 37559.0 56 34144.5 57 30730.0 58 29217.0 59 27704.0 60 25792.5 61 23881.0 62 20517.5 63 17154.0 64 14248.5 65 11343.0 66 9499.0 67 7655.0 68 6305.0 69 4955.0 70 4076.5 71 3198.0 72 2744.0 73 2290.0 74 1680.5 75 834.5 76 598.0 77 469.0 78 340.0 79 208.0 80 76.0 81 67.0 82 58.0 83 34.5 84 11.0 85 8.5 86 6.0 87 4.0 88 2.0 89 2.0 90 2.0 91 2.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 728975.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.38078265835827 #Duplication Level Percentage of deduplicated Percentage of total 1 70.01338899134686 24.071151100865897 2 12.022239473889977 8.266680048370937 3 4.576847801078899 4.720668285278358 4 2.446444549978727 3.3644271343417493 5 1.5552634090671609 2.67355866218177 6 1.1309068986268038 2.332887857311569 7 0.8986901585428025 2.162836971264594 8 0.7104269169031824 1.9540026739756693 9 0.6116289428638227 1.8925453576946263 >10 5.849300024534788 39.52803838874391 >50 0.12804530337177583 2.9427449430161503 >100 0.050229990108855406 2.91528365156844 >500 0.0041172123040045415 1.0532957344656841 >1k 0.002470327382402725 2.1218791909206565 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTCTGC 3436 0.4713467540039096 Illumina Single End Adapter 2 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTCTGCT 3219 0.4415789293185637 Illumina Single End Adapter 2 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2552 0.3500805926129154 No Hit TCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTCTGC 2412 0.3308755444288213 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTCTGC 2369 0.3249768510579924 Illumina Single End Adapter 2 (95% over 21bp) CCTGTATCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTCTGC 1002 0.13745327343187352 Illumina Single End Adapter 2 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTCTG 959 0.13155458006104462 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 944 0.12949689632703454 No Hit CTGTCACTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTCTGCT 895 0.12277512946260159 Illumina Single End Adapter 2 (95% over 22bp) TCTGTATCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTCTGC 820 0.1124867107925512 Illumina Single End Adapter 2 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTCTG 750 0.10288418670050413 No Hit GCTGTATCTTATACACATCTGACGCTCTACAGGTCGTATGCCGTCTTCTGC 731 0.10027778730409137 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.46517370280187936 0.0 2 0.0 0.0 0.0 1.6792071058678282 0.0 3 0.0 0.0 0.0 2.3678452621832022 0.0 4 0.0 0.0 0.0 3.064028258856614 0.0 5 0.0 0.0 0.0 4.205905552316609 0.0 6 0.0 0.0 0.0 4.9244487122329295 0.0 7 0.0 0.0 0.0 5.794163037141192 0.0 8 0.0 0.0 0.0 7.193250797352447 0.0 9 0.0 0.0 0.0 7.837031448266401 0.0 10 0.0 0.0 0.0 9.136390136835969 0.0 11 0.0 0.0 0.0 11.612058026681298 0.0 12 0.0 0.0 0.0 13.753832435954594 0.0 13 0.0 0.0 0.0 14.451935937446414 0.0 14 0.0 0.0 0.0 14.693645186734798 0.0 15 0.0 0.0 0.0 15.055660345004974 0.0 16 0.0 0.0 0.0 15.930038753043657 0.0 17 0.0 0.0 0.0 17.107033848897423 0.0 18 0.0 0.0 0.0 18.39747590795295 0.0 19 0.0 0.0 0.0 19.27747865153126 0.0 20 0.0 0.0 0.0 20.19424534449055 0.0 21 0.0 0.0 0.0 21.4694605439144 0.0 22 0.0 0.0 0.0 22.763743612606742 0.0 23 0.0 0.0 0.0 23.939778456051304 0.0 24 0.0 0.0 0.0 24.852292602626978 0.0 25 0.0 0.0 0.0 25.670702013100588 0.0 26 0.0 0.0 0.0 26.396241297712542 0.0 27 0.0 0.0 0.0 27.086388422099525 0.0 28 1.3717891560067216E-4 0.0 0.0 27.76501251757605 0.0 29 1.3717891560067216E-4 0.0 0.0 28.529236256387392 0.0 30 1.3717891560067216E-4 0.0 0.0 29.357522548784253 0.0 31 1.3717891560067216E-4 0.0 0.0 30.189512671902328 0.0 32 1.3717891560067216E-4 0.0 0.0 30.905860969169037 0.0 33 1.3717891560067216E-4 0.0 0.0 31.62220926643575 0.0 34 1.3717891560067216E-4 0.0 0.0 32.32237045166158 0.0 35 1.3717891560067216E-4 0.0 0.0 33.056140471209574 0.0 36 1.3717891560067216E-4 0.0 0.0 33.75959395040982 0.0 37 1.3717891560067216E-4 0.0 0.0 34.46318460852567 0.0 38 1.3717891560067216E-4 0.0 0.0 35.14564971363902 0.0 39 1.3717891560067216E-4 0.0 0.0 35.87118899825097 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCAAT 20 7.031586E-4 45.000004 26 ACGTTAT 20 7.031586E-4 45.000004 15 TCGATCC 20 7.031586E-4 45.000004 44 GCGTTAC 20 7.031586E-4 45.000004 25 AGTATAC 20 7.031586E-4 45.000004 14 CGTTACC 20 7.031586E-4 45.000004 19 AATTCGC 20 7.031586E-4 45.000004 13 ACTCGAT 20 7.031586E-4 45.000004 42 ACCACGC 20 7.031586E-4 45.000004 26 CGTAAGA 20 7.031586E-4 45.000004 39 CGACTCG 20 7.031586E-4 45.000004 13 CGTCAAC 20 7.031586E-4 45.000004 43 GCCCGTA 20 7.031586E-4 45.000004 30 TTTCGTA 25 3.889397E-5 45.0 23 GCGATAT 25 3.889397E-5 45.0 9 CGTAAAT 25 3.889397E-5 45.0 26 GCGTGTA 25 3.889397E-5 45.0 17 GGACCGT 35 1.2111013E-7 45.0 8 ACACGAC 30 2.1644046E-6 44.999996 26 ACGGACT 30 2.1644046E-6 44.999996 42 >>END_MODULE