SRR2934262.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934262.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	250916
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	1921	0.7655948604313795	No Hit
CTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGCT	1745	0.6954518643689521	No Hit
TCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	1340	0.5340432654752986	No Hit
GCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	1145	0.45632801415613194	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1062	0.4232492148766918	No Hit
CCTGTATCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	537	0.2140158459404741	No Hit
CTGTCACTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGCT	511	0.2036538124312519	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGC	498	0.19847279567664078	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCG	493	0.19648009692486726	No Hit
TCCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTG	483	0.19249469942132028	No Hit
CGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTG	447	0.17814726840855108	No Hit
TCTGTATCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	413	0.16459691689649125	No Hit
CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	368	0.14666262813052974	No Hit
GCTGTATCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC	331	0.13191665736740582	No Hit
TGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTG	321	0.12793125986385884	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTC	296	0.1179677661049913	No Hit
GCCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTG	295	0.1175692263546366	No Hit
TTCCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCT	279	0.1111925903489614	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTAG	35	1.2068631E-7	45.000004	1
GTCTAGG	70	0.0	45.000004	2
AGGGTAC	35	1.2068631E-7	45.000004	6
CGCTAGG	35	1.2068631E-7	45.000004	2
CGAGGGA	70	0.0	45.000004	4
CGGGACT	35	1.2068631E-7	45.000004	6
CAGTCTC	115	0.0	45.000004	5
GACTATC	35	1.2068631E-7	45.000004	16
GTTGACC	20	7.0227374E-4	45.0	37
TTGATCG	20	7.0227374E-4	45.0	26
TTTAGGA	25	3.8820624E-5	45.0	3
TGTTTAG	90	0.0	45.0	1
AACGTAG	20	7.0227374E-4	45.0	15
TGATATC	20	7.0227374E-4	45.0	28
GGTACTT	25	3.8820624E-5	45.0	8
AGCCGAA	20	7.0227374E-4	45.0	33
AATCCAC	20	7.0227374E-4	45.0	41
CGAACGA	20	7.0227374E-4	45.0	22
ACACGAG	25	3.8820624E-5	45.0	38
CTACTGG	25	3.8820624E-5	45.0	2