##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934260.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 562130 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.39040079696867 33.0 31.0 34.0 31.0 34.0 2 32.565129062672334 34.0 31.0 34.0 31.0 34.0 3 32.61697294220198 34.0 31.0 34.0 31.0 34.0 4 36.08121608880508 37.0 35.0 37.0 35.0 37.0 5 35.21797626883461 37.0 35.0 37.0 35.0 37.0 6 26.322092754345082 37.0 0.0 37.0 0.0 37.0 7 31.215042783697722 37.0 19.0 37.0 17.0 37.0 8 34.786359027271274 37.0 32.0 37.0 32.0 37.0 9 37.27519079216551 39.0 37.0 39.0 35.0 39.0 10 37.41159696155694 39.0 37.0 39.0 35.0 39.0 11 37.48473306886307 39.0 37.0 39.0 35.0 39.0 12 37.181166278263035 39.0 37.0 39.0 34.0 39.0 13 37.15290057460018 39.0 37.0 39.0 34.0 39.0 14 38.34949388931386 40.0 38.0 41.0 34.0 41.0 15 38.46071371390959 40.0 38.0 41.0 34.0 41.0 16 38.55488054364649 40.0 38.0 41.0 35.0 41.0 17 38.54383683489584 40.0 38.0 41.0 35.0 41.0 18 38.510406845391635 40.0 38.0 41.0 35.0 41.0 19 38.53766210663014 40.0 37.0 41.0 35.0 41.0 20 38.46782594773451 40.0 37.0 41.0 34.0 41.0 21 38.33874904381549 40.0 37.0 41.0 34.0 41.0 22 38.30581715973173 40.0 37.0 41.0 34.0 41.0 23 38.2621635564727 40.0 37.0 41.0 34.0 41.0 24 38.22420614448615 40.0 37.0 41.0 34.0 41.0 25 38.10090014765268 40.0 36.0 41.0 34.0 41.0 26 38.03649689573586 40.0 36.0 41.0 34.0 41.0 27 37.986640101044244 40.0 36.0 41.0 34.0 41.0 28 37.93063170441001 40.0 36.0 41.0 34.0 41.0 29 37.89618949353353 40.0 36.0 41.0 34.0 41.0 30 37.669800579937025 40.0 36.0 41.0 33.0 41.0 31 37.65003468948464 40.0 36.0 41.0 33.0 41.0 32 37.56914770604664 40.0 35.0 41.0 33.0 41.0 33 37.48359098429189 40.0 35.0 41.0 33.0 41.0 34 37.37616031878747 40.0 35.0 41.0 33.0 41.0 35 37.361521356269904 40.0 35.0 41.0 33.0 41.0 36 37.315923362923165 40.0 35.0 41.0 33.0 41.0 37 37.24272143454361 40.0 35.0 41.0 33.0 41.0 38 37.17194599114084 39.0 35.0 41.0 33.0 41.0 39 37.117213100172556 39.0 35.0 41.0 32.0 41.0 40 36.943374308433995 39.0 35.0 41.0 32.0 41.0 41 36.83306886307438 39.0 35.0 41.0 32.0 41.0 42 36.84098340241581 39.0 35.0 41.0 32.0 41.0 43 36.81745325814313 39.0 35.0 41.0 32.0 41.0 44 36.70239090601818 39.0 35.0 41.0 31.0 41.0 45 36.6337537580275 39.0 35.0 41.0 31.0 41.0 46 36.52189707007276 39.0 35.0 40.0 31.0 41.0 47 36.42198068062548 39.0 35.0 40.0 31.0 41.0 48 36.39891484176258 39.0 35.0 40.0 31.0 41.0 49 36.37792681408215 38.0 35.0 40.0 31.0 41.0 50 36.26171170369843 38.0 35.0 40.0 31.0 41.0 51 35.26297119883301 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 9.0 11 6.0 12 4.0 13 6.0 14 9.0 15 11.0 16 23.0 17 47.0 18 92.0 19 165.0 20 306.0 21 466.0 22 775.0 23 1138.0 24 1803.0 25 2654.0 26 3646.0 27 4428.0 28 5037.0 29 5936.0 30 7456.0 31 10071.0 32 14232.0 33 24070.0 34 36875.0 35 49939.0 36 51744.0 37 87588.0 38 123146.0 39 130364.0 40 82.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.395477914361447 5.022147901730916 52.27651966626937 19.30585451763827 2 20.025794744987817 4.96095209293224 53.906391759913184 21.106861402166757 3 21.094408766655402 5.152188995428104 51.382064646967784 22.371337590948713 4 19.760019924216817 4.850123636881149 50.2116948036931 25.17816163520894 5 17.631686620532616 8.629854304164516 48.651379574119865 25.087079501183002 6 16.352267269137034 31.15791720776333 39.03225232597442 13.45756319712522 7 82.78156298365147 2.5949513457741094 9.606852507427108 5.016633163147315 8 83.85462437514454 3.2609894508387742 8.035507800686673 4.848878373330013 9 78.68873748065394 5.3574795865725005 10.14996531051536 5.8038176222581965 10 40.54364648746731 26.202124063828652 17.691992955366196 15.562236493337839 11 31.484887837333 25.563303862095953 23.404372654012416 19.547435646558625 12 30.11118424563713 21.098144557308807 29.09149129204988 19.69917990500418 13 25.27333534947432 23.739704338854 30.13786846459004 20.849091847081635 14 20.278761140661413 27.473893939124398 29.445146140572465 22.80219877964172 15 17.725792966039883 25.577713340330526 36.2071051180332 20.489388575596394 16 21.03712664330315 22.882073541707435 34.57972355149165 21.50107626349777 17 20.924341344528845 23.31951683774216 29.850924163449736 25.905217654279262 18 21.076975076939497 23.807304360201375 31.496628893672284 23.619091669186844 19 24.872716275594613 24.914521551954174 28.444310035045273 21.768452137405937 20 28.239908917865975 24.519950901037127 28.185651005995055 19.054489175101843 21 26.521623112091508 24.412858235639444 28.754202764485083 20.311315887783966 22 22.80433351715795 24.552327753366658 28.059167808158254 24.584170921317135 23 22.94060092861082 25.891875544802804 27.52050237489549 23.64702115169089 24 23.6196253535659 22.862149324889263 29.0512870688275 24.466938252717345 25 23.522672691370325 24.56478038887802 27.28194545745646 24.6306014622952 26 21.586465764147082 27.960258303239467 27.105473822781207 23.347802109832244 27 21.030188746375394 27.364132851831425 29.27276608613666 22.332912315656518 28 19.677120950669774 26.280041983171152 30.362905377759592 23.67993168839948 29 22.121573301549464 25.174070054969487 29.601159874050488 23.10319676943056 30 23.094835714158645 24.964509988792628 28.243644708519383 23.697009588529344 31 23.36167790368776 28.095102556348177 25.213029014640743 23.330190525323324 32 25.014498425631082 28.026435166242685 25.045274224823437 21.913792183302792 33 24.386885595858608 26.418977816519313 25.749737605180297 23.444398982441783 34 21.56387312543362 27.41305391991176 26.851795847935534 24.171277106719085 35 21.282443562876914 26.965114831088894 26.764805294149042 24.98763631188515 36 22.461174461423514 27.456104459822463 26.22720722964439 23.855513849109634 37 21.49716257805134 27.794994040524436 27.522992901997757 23.184850479426466 38 22.742604023980217 27.033426431608348 25.460658566523758 24.763310977887677 39 24.23976660203156 25.173536370590433 26.515396794335828 24.071300233042177 40 24.20632238094391 25.689964954725774 27.989788838880685 22.11392382544963 41 19.184352374006014 27.455214985857364 27.17752121395407 26.182911426182553 42 21.270702506537635 26.439079928130504 25.85416184868269 26.436055716649175 43 21.652464732357284 23.70981801362674 28.261434187821322 26.37628306619465 44 22.731574546813015 24.296692935797772 27.437069716969386 25.534662800419834 45 22.9825840997634 24.258267660505577 25.942753455606354 26.816394784124668 46 22.19789016775479 26.447085193816378 27.15261594293135 24.202408695497482 47 20.180919004500737 26.59206945012719 29.315105046875278 23.911906498496787 48 21.18175511002793 23.58369060537598 29.31403767811716 25.920516606478927 49 22.11961645882625 22.81678615266931 30.185900058705283 24.877697329799155 50 21.760268976927044 24.25328660630103 27.69910874708697 26.287335669684946 51 19.939693665166423 25.667194421219293 25.25376692224219 29.139344991372102 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 188.0 1 467.5 2 747.0 3 2025.5 4 3304.0 5 2262.0 6 1220.0 7 1214.5 8 1209.0 9 1283.0 10 1357.0 11 1368.0 12 1379.0 13 1346.5 14 1314.0 15 1214.5 16 1115.0 17 1251.5 18 1388.0 19 1393.0 20 1398.0 21 1512.5 22 1627.0 23 2010.0 24 2393.0 25 2934.0 26 4116.0 27 4757.0 28 5437.0 29 6117.0 30 7119.0 31 8121.0 32 9335.5 33 10550.0 34 11702.0 35 12854.0 36 13988.0 37 15122.0 38 16969.0 39 18816.0 40 22397.5 41 25979.0 42 29484.0 43 32989.0 44 35993.0 45 38997.0 46 44168.0 47 49339.0 48 54565.0 49 59791.0 50 56807.0 51 53823.0 52 47666.0 53 41509.0 54 36720.5 55 31932.0 56 29264.5 57 26597.0 58 26683.0 59 26769.0 60 25722.5 61 24676.0 62 21007.5 63 17339.0 64 14434.0 65 11529.0 66 9772.5 67 8016.0 68 6669.5 69 5323.0 70 4322.0 71 3321.0 72 2877.5 73 2434.0 74 1950.0 75 1232.5 76 999.0 77 699.5 78 400.0 79 338.0 80 276.0 81 180.0 82 84.0 83 63.0 84 42.0 85 32.0 86 22.0 87 19.5 88 17.0 89 10.5 90 4.0 91 3.5 92 3.0 93 1.5 94 0.0 95 1.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 562130.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.759457040736734 #Duplication Level Percentage of deduplicated Percentage of total 1 70.62537032837565 23.136487852585443 2 11.152028242030248 7.3066878022374535 3 4.232172819102918 4.159310509691271 4 2.2592414091234896 2.9604608754733794 5 1.5004107032842582 2.457631998885112 6 1.082618892130342 2.127960425294036 7 0.9170909928204721 2.10303820872242 8 0.699736516086972 1.8338390670868756 9 0.6288080283031149 1.8539468631059635 >10 6.707084198935574 44.88661259417913 >50 0.14964956888073178 3.171768032936193 >100 0.04132114961632063 2.307072981797718 >500 0.001675181741202188 0.30182924357486796 >1k 0.0027919695686703127 1.393353544430163 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTGC 2178 0.3874548591962713 RNA PCR Primer, Index 30 (95% over 24bp) CTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTGCT 1730 0.3077579919235764 RNA PCR Primer, Index 30 (96% over 25bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1307 0.23250849447636668 No Hit GCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTGC 1204 0.2141853307953676 Illumina Single End Adapter 2 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTGC 1198 0.21311796203725117 Illumina Single End Adapter 2 (95% over 22bp) CCTGTATCTTATACACATCTGACGCATCGGAACTCGTATGCCGTCTTCTGC 643 0.11438635191147956 RNA PCR Primer, Index 30 (95% over 24bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7789479301940833E-4 0.0 0.0 0.32554747122551725 0.0 2 1.7789479301940833E-4 0.0 0.0 1.2184014373899277 0.0 3 1.7789479301940833E-4 0.0 0.0 1.7033426431608347 0.0 4 1.7789479301940833E-4 0.0 0.0 2.190952270827033 0.0 5 1.7789479301940833E-4 0.0 0.0 3.023144112571825 0.0 6 1.7789479301940833E-4 0.0 0.0 3.5434863821535942 0.0 7 1.7789479301940833E-4 0.0 0.0 4.193336061053493 0.0 8 1.7789479301940833E-4 0.0 0.0 5.189902691548219 0.0 9 1.7789479301940833E-4 0.0 0.0 5.626100724031808 0.0 10 1.7789479301940833E-4 0.0 0.0 6.571433654136944 0.0 11 1.7789479301940833E-4 0.0 0.0 8.255919449237721 0.0 12 1.7789479301940833E-4 0.0 0.0 9.895397861704588 0.0 13 1.7789479301940833E-4 0.0 0.0 10.420365395904861 0.0 14 1.7789479301940833E-4 0.0 0.0 10.596303346201056 0.0 15 1.7789479301940833E-4 0.0 0.0 10.885738174443635 0.0 16 1.7789479301940833E-4 0.0 0.0 11.577571024496113 0.0 17 1.7789479301940833E-4 0.0 0.0 12.551900805863413 0.0 18 1.7789479301940833E-4 0.0 0.0 13.60236955864302 0.0 19 1.7789479301940833E-4 0.0 0.0 14.309145571309127 0.0 20 1.7789479301940833E-4 0.0 0.0 15.088680554320176 0.0 21 1.7789479301940833E-4 0.0 0.0 16.081333499368473 0.0 22 3.5578958603881667E-4 0.0 0.0 17.1200611958088 0.0 23 3.5578958603881667E-4 0.0 0.0 18.11502677316635 0.0 24 3.5578958603881667E-4 0.0 0.0 18.873214381015067 0.0 25 3.5578958603881667E-4 0.0 0.0 19.561845124793198 0.0 26 3.5578958603881667E-4 0.0 0.0 20.143916887552702 0.0 27 3.5578958603881667E-4 0.0 0.0 20.740931812925837 0.0 28 3.5578958603881667E-4 0.0 0.0 21.312685677690215 0.0 29 3.5578958603881667E-4 0.0 0.0 21.937807980360414 0.0 30 3.5578958603881667E-4 0.0 0.0 22.611495561524915 0.0 31 3.5578958603881667E-4 0.0 0.0 23.29870314695889 0.0 32 3.5578958603881667E-4 0.0 0.0 23.9211570277338 0.0 33 3.5578958603881667E-4 0.0 0.0 24.570650917047658 0.0 34 3.5578958603881667E-4 0.0 0.0 25.14347215057015 0.0 35 3.5578958603881667E-4 0.0 0.0 25.76770497927526 0.0 36 3.5578958603881667E-4 0.0 0.0 26.42235781758668 0.0 37 3.5578958603881667E-4 0.0 0.0 27.07736644548414 0.0 38 3.5578958603881667E-4 0.0 0.0 27.681141372992013 0.0 39 3.5578958603881667E-4 0.0 0.0 28.350203689538006 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCAA 20 7.0302055E-4 45.000004 19 CGGGTAC 20 7.0302055E-4 45.000004 6 AAATCGG 20 7.0302055E-4 45.000004 40 ACACGGC 20 7.0302055E-4 45.000004 27 TCCGCGA 20 7.0302055E-4 45.000004 32 TTAATCG 20 7.0302055E-4 45.000004 20 CCGATAC 20 7.0302055E-4 45.000004 39 GGCGTTA 20 7.0302055E-4 45.000004 22 TTATGCG 30 2.163515E-6 45.000004 1 ATTACGA 20 7.0302055E-4 45.000004 20 CGACAAT 20 7.0302055E-4 45.000004 20 GTTACCG 20 7.0302055E-4 45.000004 1 CTACGTT 20 7.0302055E-4 45.000004 29 CGGATCC 20 7.0302055E-4 45.000004 25 TATTACG 20 7.0302055E-4 45.000004 19 ACTCGTT 20 7.0302055E-4 45.000004 31 AATTCGG 20 7.0302055E-4 45.000004 30 TCCGTGA 20 7.0302055E-4 45.000004 25 CCGAATA 20 7.0302055E-4 45.000004 6 CACGTTA 20 7.0302055E-4 45.000004 28 >>END_MODULE