##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934258.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1548545 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.42603347012841 33.0 31.0 34.0 31.0 34.0 2 32.59210420104033 34.0 31.0 34.0 31.0 34.0 3 32.653344914096785 34.0 31.0 34.0 31.0 34.0 4 36.09646668324137 37.0 35.0 37.0 35.0 37.0 5 35.161237161335315 37.0 35.0 37.0 35.0 37.0 6 25.882337290811698 37.0 0.0 37.0 0.0 37.0 7 31.022716162591337 37.0 19.0 37.0 17.0 37.0 8 34.80818058241769 37.0 32.0 37.0 32.0 37.0 9 37.34302716420898 39.0 37.0 39.0 35.0 39.0 10 37.41541446971189 39.0 37.0 39.0 35.0 39.0 11 37.430789547607596 39.0 37.0 39.0 35.0 39.0 12 37.16368332854389 39.0 37.0 39.0 34.0 39.0 13 37.16774843482107 39.0 37.0 39.0 34.0 39.0 14 38.10782637895573 40.0 38.0 41.0 33.0 41.0 15 38.312242782741215 40.0 38.0 41.0 33.0 41.0 16 38.4782424792305 40.0 38.0 41.0 34.0 41.0 17 38.49226984039857 40.0 38.0 41.0 34.0 41.0 18 38.47811397150228 40.0 38.0 41.0 34.0 41.0 19 38.48742077240248 40.0 38.0 41.0 34.0 41.0 20 38.39900035194328 40.0 37.0 41.0 34.0 41.0 21 38.321866009705886 40.0 37.0 41.0 34.0 41.0 22 38.36711235385475 40.0 37.0 41.0 34.0 41.0 23 38.3281441611319 40.0 37.0 41.0 34.0 41.0 24 38.29134639290431 40.0 37.0 41.0 34.0 41.0 25 38.18520869590486 40.0 37.0 41.0 34.0 41.0 26 38.143000687742365 40.0 37.0 41.0 34.0 41.0 27 38.13035591474578 40.0 37.0 41.0 34.0 41.0 28 38.06252966494355 40.0 36.0 41.0 34.0 41.0 29 38.03434514334423 40.0 36.0 41.0 34.0 41.0 30 37.81002747740621 40.0 36.0 41.0 34.0 41.0 31 37.81511289629943 40.0 36.0 41.0 33.0 41.0 32 37.7779586644237 40.0 36.0 41.0 33.0 41.0 33 37.75269817796706 40.0 36.0 41.0 33.0 41.0 34 37.64862499959639 40.0 36.0 41.0 33.0 41.0 35 37.625832636442595 40.0 36.0 41.0 33.0 41.0 36 37.602090995095395 40.0 36.0 41.0 33.0 41.0 37 37.53201230832814 40.0 36.0 41.0 33.0 41.0 38 37.46166239921991 40.0 35.0 41.0 33.0 41.0 39 37.41766755244439 40.0 35.0 41.0 33.0 41.0 40 37.345495287511824 40.0 35.0 41.0 33.0 41.0 41 37.253760788352935 40.0 35.0 41.0 33.0 41.0 42 37.24453212531764 40.0 35.0 41.0 32.0 41.0 43 37.20505635935669 40.0 35.0 41.0 32.0 41.0 44 37.107952303614034 39.0 35.0 41.0 32.0 41.0 45 37.082377974162846 39.0 35.0 41.0 32.0 41.0 46 37.0532932526985 39.0 35.0 41.0 32.0 41.0 47 36.982931719775664 39.0 35.0 41.0 32.0 41.0 48 36.92838503240138 39.0 35.0 41.0 32.0 41.0 49 36.91365443044923 39.0 35.0 41.0 32.0 41.0 50 36.82133357441986 39.0 35.0 41.0 32.0 41.0 51 35.884454116606236 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 13.0 10 16.0 11 14.0 12 4.0 13 10.0 14 11.0 15 30.0 16 83.0 17 148.0 18 238.0 19 473.0 20 770.0 21 1296.0 22 2118.0 23 3031.0 24 4610.0 25 6772.0 26 8883.0 27 10542.0 28 12692.0 29 15721.0 30 20331.0 31 28192.0 32 40882.0 33 67208.0 34 98406.0 35 109377.0 36 131485.0 37 230194.0 38 343980.0 39 410768.0 40 244.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.955713266324192 3.9853539935875286 56.08593873603931 15.972994004048962 2 20.171063805055713 4.261161283656594 54.53577390389043 21.032001007397266 3 21.522203100329666 4.3040402442292605 52.39660455459803 21.77715210084305 4 19.450516452540935 4.494670803883646 51.52959713795854 24.525215605616886 5 18.471274648137445 7.850918119912563 50.162119925478436 23.51568730647156 6 16.195654630637147 31.51164480205612 39.23024516562321 13.062455401683515 7 87.38816114481659 1.6774456021620296 7.456870804529412 3.4775224484919716 8 89.5150609120174 1.9608083717295912 5.343725884620724 3.180404831632274 9 84.23281209135027 4.622920225114543 7.092980830392401 4.051286853142789 10 41.37309538954309 33.3093323087156 13.52618102799725 11.791391273744063 11 28.378122689363238 23.196355288351324 29.466047160398958 18.95947486188648 12 27.743074951002395 21.271580741922254 30.986054651301703 19.999289655773644 13 26.498099829194505 21.754614815843258 32.46105214895273 19.286233206009513 14 20.69039001126864 24.450952345588924 33.897755635128455 20.960902008013974 15 18.781953382045728 25.409787897671688 35.756468168506565 20.051790551776023 16 25.40068257622478 25.025491671213945 29.970843598345542 19.60298215421573 17 25.366263169620513 24.16403785488959 29.035061945245378 21.43463703024452 18 24.86669744824981 23.13817163853811 31.450619775337497 20.544511137874586 19 25.128620737531037 25.165171176814365 29.118495103468096 20.587712982186503 20 24.352731112108465 29.51480260502601 28.3474487341343 17.785017548731226 21 24.723272491274066 25.968957957308312 31.285109570596916 18.022659980820706 22 22.843959975331682 22.732565085289743 32.668085202561116 21.755389736817467 23 21.53783067330946 24.599543442392697 32.11246686405626 21.750159020241583 24 21.912052927102536 26.019134090388075 29.958380286010417 22.11043269649897 25 23.103171041203193 26.591219499594782 27.32797561582001 22.977633843382016 26 21.015985973930366 26.752467638977233 27.60927192945636 24.62227445763604 27 20.36828119299084 25.125004439651416 32.14804865212183 22.358665715235915 28 18.810819188334857 26.431327471917186 29.81418040806047 24.943672931687487 29 20.561559399307093 26.660058312803308 29.37861024380951 23.399772044080088 30 23.384467354839543 24.216667904387666 30.041167676754633 22.357697064018158 31 23.357345120742373 25.427869387069794 29.530817638492906 21.68396785369492 32 24.045862406323355 26.140990413581783 27.59487131468572 22.218275865409144 33 23.983804151639116 24.71061544869539 28.147389969293755 23.158190430371736 34 20.779764230293598 24.335359966936704 30.85334943446913 24.031526368300565 35 19.79406475110507 26.521282881672796 29.290850443480814 24.393801923741318 36 22.51591009625164 25.646332525047704 28.049168735813296 23.78858864288736 37 21.11000971880055 27.1649839042456 29.251910664527024 22.473095712426826 38 22.5896567422968 26.48602397734648 28.66755567322874 22.25676360712798 39 20.35220158277609 24.949936876228975 28.558420969361563 26.139440571633372 40 22.21943824687045 23.513620850540345 29.542764336845234 24.72417656574397 41 19.894094133525343 23.711225698962572 30.019857349963996 26.37482281754809 42 19.819055952523176 24.2219631977114 32.060676312280236 23.89830453748519 43 20.144329031445647 23.9081847799063 31.7893893945607 24.158096794087353 44 21.459499078166925 24.166168887568652 29.242999073323666 25.131332960940757 45 20.843566057169795 23.395057941487007 27.92750614286314 27.83386985848006 46 20.969232408486675 24.305138048942716 29.189594102851384 25.536035439719218 47 18.430655873739543 24.764989070385425 32.254987746562094 24.549367309312935 48 19.180133609291303 26.307469269540118 30.696363360444806 23.816033760723776 49 21.987026531356854 23.79097798255782 30.559525231749802 23.66247025433552 50 20.408964544136595 24.085770836494902 28.87362007561937 26.631644543749132 51 18.844528250712766 23.965464355249605 28.383740866426226 28.806266527611402 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 248.0 1 811.0 2 1374.0 3 3516.0 4 5658.0 5 3852.0 6 2046.0 7 2022.5 8 1999.0 9 2102.0 10 2205.0 11 2227.0 12 2249.0 13 2270.5 14 2292.0 15 2466.5 16 2641.0 17 2596.0 18 2551.0 19 2749.5 20 2948.0 21 3882.5 22 4817.0 23 6093.5 24 7370.0 25 9440.0 26 13520.0 27 15530.0 28 19422.0 29 23314.0 30 26772.5 31 30231.0 32 34441.0 33 38651.0 34 44492.5 35 50334.0 36 55207.0 37 60080.0 38 64451.0 39 68822.0 40 74812.5 41 80803.0 42 84965.0 43 89127.0 44 98703.5 45 108280.0 46 120485.5 47 132691.0 48 144413.5 49 156136.0 50 151768.5 51 147401.0 52 131338.5 53 115276.0 54 104467.5 55 93659.0 56 86551.5 57 79444.0 58 71769.5 59 64095.0 60 55984.0 61 47873.0 62 40614.0 63 33355.0 64 28055.0 65 22755.0 66 18832.0 67 14909.0 68 12197.5 69 9486.0 70 7833.0 71 6180.0 72 5552.5 73 4925.0 74 3887.0 75 2032.5 76 1216.0 77 932.0 78 648.0 79 454.5 80 261.0 81 238.5 82 216.0 83 141.0 84 66.0 85 39.0 86 12.0 87 9.0 88 6.0 89 4.5 90 3.0 91 3.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1548545.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.091631456400826 #Duplication Level Percentage of deduplicated Percentage of total 1 70.80269489782054 21.305686009852067 2 10.782324844194708 6.489154909094032 3 3.9844734852908856 3.596979230015227 4 2.0536213744254557 2.471872702007925 5 1.285877113619919 1.9347070100635526 6 1.00371384531295 1.812203227250652 7 0.8209275338894506 1.729213416154934 8 0.6925138757857059 1.6671097862869761 9 0.6113786479398299 1.6557642858706187 >10 7.737341003133019 49.90584420339257 >50 0.16921769002889261 3.2757381536798995 >100 0.05125604864433477 2.549761197352484 >500 0.003028765944310092 0.640297126702992 >1k 0.0016308739700131264 0.9656687422760333 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGCT 2423 0.15646946004152285 TruSeq Adapter, Index 16 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2213 0.14290834299293853 No Hit CCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 2159 0.13942119860901686 TruSeq Adapter, Index 13 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1858 0.119983597506046 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 1726 0.11145946678979299 No Hit TCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 1720 0.1110720063026906 TruSeq Adapter, Index 13 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 1675 0.10816605264942253 TruSeq Adapter, Index 13 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9373024355120452E-4 0.0 0.0 0.16479986051422466 0.0 2 1.9373024355120452E-4 0.0 0.0 0.5556183385048545 0.0 3 1.9373024355120452E-4 0.0 0.0 0.7989435244051675 0.0 4 1.9373024355120452E-4 0.0 0.0 1.0976109832132743 0.0 5 1.9373024355120452E-4 0.0 0.0 1.6422512745835607 0.0 6 1.9373024355120452E-4 0.0 0.0 2.058577567975099 0.0 7 1.9373024355120452E-4 0.0 0.0 2.596243570577542 0.0 8 1.9373024355120452E-4 0.0 0.0 3.4717105411854354 0.0 9 1.9373024355120452E-4 0.0 0.0 3.9063120542186374 0.0 10 1.9373024355120452E-4 0.0 0.0 4.707063727563616 0.0 11 1.9373024355120452E-4 0.0 0.0 6.200594751847702 0.0 12 1.9373024355120452E-4 0.0 0.0 7.637039931032033 0.0 13 1.9373024355120452E-4 0.0 0.0 8.050266540526753 0.0 14 1.9373024355120452E-4 0.0 0.0 8.212612484622662 0.0 15 1.9373024355120452E-4 0.0 0.0 8.42300352911927 0.0 16 2.58306991401606E-4 0.0 0.0 8.867743591564984 0.0 17 2.58306991401606E-4 0.0 0.0 9.522358084524505 0.0 18 2.58306991401606E-4 0.0 0.0 10.219141193830337 0.0 19 2.58306991401606E-4 0.0 0.0 10.78418773752135 0.0 20 2.58306991401606E-4 0.0 0.0 11.399668721283527 0.0 21 2.58306991401606E-4 0.0 0.0 12.227671782221375 0.0 22 3.8746048710240903E-4 0.0 0.0 13.192319241610674 0.0 23 3.8746048710240903E-4 0.0 0.0 14.054225095169983 0.0 24 3.8746048710240903E-4 0.0 0.0 14.681846507528034 0.0 25 3.8746048710240903E-4 0.0 0.0 15.24101656716466 0.0 26 3.8746048710240903E-4 0.0 0.0 15.727021171486783 0.0 27 3.8746048710240903E-4 0.0 0.0 16.27340503504903 0.0 28 3.8746048710240903E-4 0.0 0.0 16.804548786118584 0.0 29 3.8746048710240903E-4 0.0 0.0 17.427456095883556 0.0 30 3.8746048710240903E-4 0.0 0.0 18.26630805046027 0.0 31 3.8746048710240903E-4 0.0 0.0 18.868809107904518 0.0 32 3.8746048710240903E-4 0.0 0.0 19.438440600692907 0.0 33 3.8746048710240903E-4 0.0 0.0 20.026282736375112 0.0 34 3.8746048710240903E-4 0.0 0.0 20.667658996025303 0.0 35 3.8746048710240903E-4 0.0 0.0 21.39763455372624 0.0 36 3.8746048710240903E-4 0.0 0.0 22.0182171005686 0.0 37 3.8746048710240903E-4 0.0 0.0 22.6379601496889 0.0 38 3.8746048710240903E-4 0.0 0.0 23.40345291870756 0.0 39 3.8746048710240903E-4 0.0 0.0 24.820977110771725 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 40 6.8175723E-9 45.0 22 ACGTTAG 40 6.8175723E-9 45.0 1 TCGAATG 20 7.0340466E-4 45.0 31 CGTTAGG 505 0.0 42.772278 2 TTAGGGA 4580 0.0 41.95415 4 TAGGGAT 3205 0.0 41.419655 5 GTTAGGG 2380 0.0 41.313026 3 CGTTTAT 610 0.0 41.311478 1 TATTGCG 60 3.6379788E-12 41.250004 1 TGTAGGG 2275 0.0 41.043953 3 CTAGGGA 2415 0.0 40.90062 4 TAGGGAC 2045 0.0 40.709045 5 TCTAGGG 2660 0.0 40.68609 3 TAGGGGT 1990 0.0 40.590454 5 CTTAGGG 3165 0.0 40.450237 3 CGTAGGG 610 0.0 40.204918 3 TCGTTAG 230 0.0 40.108692 1 TAGGGAA 1825 0.0 39.82192 5 TTTAGGG 6435 0.0 39.615383 3 AGGGATC 1285 0.0 39.571983 6 >>END_MODULE