##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934256.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 957562 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.2930149692657 33.0 31.0 34.0 31.0 34.0 2 32.46651078468026 34.0 31.0 34.0 31.0 34.0 3 32.477410340009314 34.0 31.0 34.0 30.0 34.0 4 35.9999968670436 37.0 35.0 37.0 35.0 37.0 5 35.09415473880542 37.0 35.0 37.0 35.0 37.0 6 25.73681704161193 36.0 0.0 37.0 0.0 37.0 7 30.949386044976723 37.0 19.0 37.0 17.0 37.0 8 34.766059012366824 37.0 32.0 37.0 32.0 37.0 9 37.37415749580706 39.0 37.0 39.0 35.0 39.0 10 37.2636925859631 39.0 37.0 39.0 34.0 39.0 11 37.312509268329364 39.0 37.0 39.0 34.0 39.0 12 37.222516139947075 39.0 37.0 39.0 34.0 39.0 13 37.30647832725192 39.0 37.0 39.0 34.0 39.0 14 38.56077308832222 40.0 38.0 41.0 34.0 41.0 15 38.67070017398351 40.0 38.0 41.0 35.0 41.0 16 38.699375079629306 40.0 38.0 41.0 35.0 41.0 17 38.69407202875636 40.0 38.0 41.0 35.0 41.0 18 38.65156825354389 40.0 38.0 41.0 35.0 41.0 19 38.60775699119222 40.0 38.0 41.0 35.0 41.0 20 38.52543438440539 40.0 38.0 41.0 35.0 41.0 21 38.420564934698746 40.0 38.0 41.0 34.0 41.0 22 38.40648960589497 40.0 37.0 41.0 34.0 41.0 23 38.332261514136945 40.0 37.0 41.0 34.0 41.0 24 38.28280048707029 40.0 37.0 41.0 34.0 41.0 25 38.157685873081846 40.0 37.0 41.0 34.0 41.0 26 38.1193301321481 40.0 37.0 41.0 34.0 41.0 27 38.09479699486822 40.0 37.0 41.0 34.0 41.0 28 38.03442388064689 40.0 37.0 41.0 34.0 41.0 29 37.99012178845861 40.0 37.0 41.0 34.0 41.0 30 37.74503374194047 40.0 36.0 41.0 33.0 41.0 31 37.732068524022466 40.0 36.0 41.0 33.0 41.0 32 37.57239426794296 40.0 36.0 41.0 33.0 41.0 33 37.41289023582807 40.0 36.0 41.0 33.0 41.0 34 37.29960879817704 40.0 36.0 41.0 32.0 41.0 35 37.2238298929991 40.0 36.0 41.0 32.0 41.0 36 37.1685864727297 40.0 36.0 41.0 32.0 41.0 37 37.098107485468304 40.0 36.0 41.0 32.0 41.0 38 36.97803693129009 40.0 36.0 41.0 31.0 41.0 39 36.91081517436991 40.0 36.0 41.0 31.0 41.0 40 36.9074033848461 40.0 36.0 41.0 31.0 41.0 41 36.85325649931806 40.0 36.0 41.0 31.0 41.0 42 36.80915387202082 40.0 36.0 41.0 31.0 41.0 43 36.74955459803125 40.0 35.0 41.0 31.0 41.0 44 36.61083251006201 39.0 35.0 41.0 31.0 41.0 45 36.56687922035336 39.0 35.0 41.0 30.0 41.0 46 36.483575998212125 39.0 35.0 41.0 30.0 41.0 47 36.419941476374376 39.0 35.0 41.0 30.0 41.0 48 36.360818411758196 39.0 35.0 41.0 30.0 41.0 49 36.325312616833166 39.0 35.0 41.0 30.0 41.0 50 36.235655759104894 39.0 35.0 41.0 30.0 41.0 51 35.293394056990564 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 0.0 12 1.0 13 6.0 14 6.0 15 8.0 16 29.0 17 59.0 18 120.0 19 294.0 20 537.0 21 960.0 22 1662.0 23 2644.0 24 4712.0 25 7639.0 26 9763.0 27 9902.0 28 9898.0 29 10460.0 30 12775.0 31 16561.0 32 22114.0 33 33357.0 34 51200.0 35 70927.0 36 89225.0 37 153001.0 38 218079.0 39 231491.0 40 128.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.304247662292365 4.2878685662129445 58.0426123843678 15.365271387126892 2 22.20848362821415 3.9716488331826034 53.08491773900802 20.734949799595224 3 18.947702603069043 3.8687834312556264 55.34095964543289 21.84255432024245 4 16.797345759334643 4.081615602958346 55.84265039757217 23.27838824013484 5 16.440293161173898 7.617783496003391 53.912018229629 22.029905113193713 6 13.940089519007644 31.533623932445103 42.590662536733916 11.935624011813333 7 83.32588385921747 1.1936563898734494 11.59663812891489 3.8838216219941892 8 85.67351252451539 1.3453959117007566 9.084215956773555 3.8968756070103034 9 81.85600514640305 3.0228852022114494 10.957828318166344 4.163281333219154 10 37.55370409435629 23.322667357309502 23.086233580697645 16.03739496763656 11 24.876613733627693 27.027701600522995 26.63911057456332 21.456574091285997 12 20.73442764019458 22.73106075637922 34.38095914415985 22.153552459266347 13 20.82162826010222 25.25068872824945 35.53148516754007 18.39619784410827 14 19.903045442488317 26.497500945108516 34.04688155962747 19.552572052775695 15 18.0632690102573 26.640572620885123 35.36972018522038 19.926438183637195 16 18.684116537623673 26.264304556780658 33.68523395874105 21.366344946854614 17 19.289299282970713 26.770172584125103 31.1095260672416 22.831002065662588 18 20.252683377159915 25.776085517178 33.35428933061254 20.61694177504955 19 20.810767344568813 29.748569805401637 30.326809125675414 19.11385372435414 20 21.823756581819246 27.9564143105094 31.149210181690584 19.070618925980774 21 21.10923365797724 28.60232548910671 31.62061568859249 18.667825164323563 22 20.48619306112816 25.500803081158192 30.474580236057825 23.53842362165583 23 18.841286517217686 27.807285585685314 29.64664429039582 23.704783606701184 24 19.716112377057566 26.796489417917584 31.564118041442747 21.9232801635821 25 18.425229906784104 28.84377199596475 29.566649470217072 23.164348627034073 26 18.81392536462391 28.782157186688696 30.187496997583445 22.21642045110395 27 20.471885893550496 27.960173858194036 30.22822543083372 21.339714817421743 28 19.055163007721692 26.458234558180045 31.708860627301416 22.777741806796843 29 19.30935020395546 25.569205962642627 31.763791796249226 23.357652037152686 30 21.394437122609293 25.983591662994144 31.054594898293793 21.567376316102767 31 20.888882390905238 28.570160470027005 29.43005257100846 21.1109045680593 32 19.029994924610627 29.976440167842917 28.38949331740399 22.604071590142468 33 20.406093809069283 28.226475152522763 28.51700464304139 22.850426395366565 34 18.60119762480132 27.58098170144596 29.37115299061575 24.446667683136965 35 17.964372019775222 27.501195745027474 28.644620400558917 25.889811834638383 36 21.484457403280413 27.128165069207004 28.04946311570426 23.33791441180832 37 20.152011044715643 28.865807122671956 29.752538216846535 21.229643615765873 38 19.381094905604023 30.804898272905568 28.57465104087255 21.23935578061786 39 18.43222684275274 28.4451555095127 31.084357984130534 22.03825966360403 40 19.40542753367406 26.721820623625415 31.671160718574882 22.201591124125645 41 18.14942531136365 27.327316664612837 29.31475977534614 25.20849824867737 42 19.9185013607474 27.23980274906481 27.016631821229332 25.825064068958458 43 20.728579454907358 26.256785461411376 28.51773566620229 24.496899417478975 44 20.169868896217686 26.71169073125291 27.75757601074395 25.360864361785453 45 20.79270062930651 25.899419567610245 27.91808781050209 25.389791992581156 46 21.189124046275854 26.640468189004995 28.636579145788993 23.53382861893016 47 19.00555786466046 27.07271174085856 29.992209381742384 23.9295210127386 48 19.63465551055702 26.616553288455474 29.631606099657255 24.117185101330254 49 20.84804952577483 24.710567044222724 30.546847097107026 23.894536332895417 50 19.922260908432037 24.775732537423163 29.73624684354642 25.565759710598375 51 18.508566547126975 24.55653002103258 28.860167801144993 28.074735630695454 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 79.0 1 270.0 2 461.0 3 5426.0 4 10391.0 5 7007.0 6 3623.0 7 3635.5 8 3648.0 9 3845.5 10 4043.0 11 4292.0 12 4541.0 13 4608.0 14 4675.0 15 4562.0 16 4449.0 17 4518.0 18 4587.0 19 4383.0 20 4179.0 21 4152.0 22 4125.0 23 4461.0 24 4797.0 25 5359.0 26 7402.0 27 8883.0 28 10133.0 29 11383.0 30 13317.5 31 15252.0 32 18390.0 33 21528.0 34 24904.5 35 28281.0 36 30947.5 37 33614.0 38 37625.5 39 41637.0 40 47220.5 41 52804.0 42 59677.0 43 66550.0 44 74492.0 45 82434.0 46 94245.0 47 106056.0 48 113812.0 49 121568.0 50 113566.0 51 105564.0 52 88307.0 53 71050.0 54 58990.0 55 46930.0 56 39305.5 57 31681.0 58 26023.5 59 20366.0 60 17246.5 61 14127.0 62 11335.5 63 8544.0 64 6650.0 65 4756.0 66 3574.5 67 2393.0 68 1812.5 69 1232.0 70 884.0 71 536.0 72 467.5 73 399.0 74 321.0 75 180.0 76 117.0 77 88.0 78 59.0 79 45.0 80 31.0 81 25.5 82 20.0 83 12.0 84 4.0 85 2.0 86 0.0 87 0.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 957562.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.940060272501555 #Duplication Level Percentage of deduplicated Percentage of total 1 74.47528416123535 32.72448474856362 2 11.12758941905421 9.778938995217851 3 4.147450982886197 5.467177384957959 4 2.115139882122979 3.717574956210222 5 1.4363236146133254 3.15560730984634 6 1.0497650140680659 2.7676042794068554 7 0.8162101784400889 2.510502710498073 8 0.6502906548549287 2.285904845517605 9 0.5474603889687523 2.1649898239284706 >10 3.4930627795012152 26.877298335351067 >50 0.0993394552474604 3.016012220486196 >100 0.037679385046464585 2.891447305889828 >500 0.0026913846428472067 0.8312575033346503 >1k 0.0017126993181754949 1.8111995807913677 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4784 0.4996021145367089 No Hit CTGTCTCTTATACACATCTGACGCCGGATTACTCGTATGCCGTCTTCTGCT 2800 0.29240926436095 TruSeq Adapter, Index 27 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCGGATTACTCGTATGCCGTCTTCTGC 2347 0.24510162266255348 TruSeq Adapter, Index 20 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCGGATTACTCGTATGCCGTCTTCTGC 2143 0.22379751911625564 TruSeq Adapter, Index 20 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCGGATTACTCGTATGCCGTCTTCTGC 1847 0.1928856825980981 TruSeq Adapter, Index 20 (95% over 21bp) CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1731 0.18077158450314446 No Hit CGCTGTCTCTTATACACATCTGACGCCGGATTACTCGTATGCCGTCTTCTG 1195 0.1247960967540483 TruSeq Adapter, Index 27 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3072385913392553 0.0 2 0.0 0.0 0.0 1.0194640138184263 0.0 3 0.0 0.0 0.0 1.5190661283551352 0.0 4 0.0 0.0 0.0 2.1070176134809024 0.0 5 0.0 0.0 0.0 3.0857531940490537 0.0 6 0.0 0.0 0.0 3.8497768290721646 0.0 7 0.0 0.0 0.0 4.738492128969194 0.0 8 0.0 0.0 0.0 6.127331702803578 0.0 9 0.0 0.0 0.0 6.712359095285736 0.0 10 0.0 0.0 0.0 7.916354241291947 0.0 11 0.0 0.0 0.0 10.311917139569031 0.0 12 0.0 0.0 0.0 12.2064158769876 0.0 13 0.0 0.0 0.0 12.884387642784487 0.0 14 0.0 0.0 0.0 13.113406755907189 0.0 15 0.0 0.0 0.0 13.384094189201326 0.0 16 0.0 0.0 0.0 14.14007656945451 0.0 17 0.0 0.0 0.0 15.323916362595842 0.0 18 0.0 0.0 0.0 16.571250738855554 0.0 19 0.0 0.0 0.0 17.473959910689857 0.0 20 0.0 0.0 0.0 18.299493923108894 0.0 21 0.0 0.0 0.0 19.58452820809514 0.0 22 0.0 0.0 0.0 21.026941336435655 0.0 23 0.0 0.0 0.0 22.586631466160938 0.0 24 0.0 0.0 0.0 23.69298280424662 0.0 25 0.0 0.0 0.0 24.641433139577384 0.0 26 0.0 0.0 0.0 25.44253009204626 0.0 27 0.0 0.0 0.0 26.25647216577099 0.0 28 0.0 0.0 0.0 27.133073367573065 0.0 29 0.0 0.0 0.0 28.039124359571495 0.0 30 0.0 0.0 0.0 28.960735701709133 0.0 31 0.0 0.0 0.0 29.866891125587692 0.0 32 0.0 0.0 0.0 30.70391264482091 0.0 33 0.0 0.0 0.0 31.594194422919873 0.0 34 0.0 0.0 0.0 32.37795568328735 0.0 35 1.0443188012891071E-4 0.0 0.0 33.234401532224545 0.0 36 1.0443188012891071E-4 0.0 0.0 34.03863144109729 0.0 37 1.0443188012891071E-4 0.0 0.0 34.872102276406125 0.0 38 1.0443188012891071E-4 0.0 0.0 35.69502549182194 0.0 39 1.0443188012891071E-4 0.0 0.0 36.48735016635999 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 25 3.8903156E-5 45.000004 1 CGAACCT 25 3.8903156E-5 45.000004 13 CGCTAGG 130 0.0 45.000004 2 TACGAAC 30 2.1651213E-6 45.000004 11 TCGTCAG 30 2.1651213E-6 45.000004 1 GTCGTAG 30 2.1651213E-6 45.000004 1 CGTAAGA 25 3.8903156E-5 45.000004 18 AGGATCG 25 3.8903156E-5 45.000004 41 CGTCCGG 60 0.0 45.000004 2 TCGCGCA 25 3.8903156E-5 45.000004 34 TGCGTCG 25 3.8903156E-5 45.000004 1 TGTCACG 20 7.0326973E-4 45.0 1 CTATCGG 20 7.0326973E-4 45.0 2 TTCCGCG 40 6.8121153E-9 45.0 1 TCGTCCG 20 7.0326973E-4 45.0 1 CGAATAT 70 0.0 45.0 14 GCGATCC 20 7.0326973E-4 45.0 9 TAGGCGA 40 6.8121153E-9 45.0 5 CGTCAGG 75 0.0 45.0 2 CGTTTTT 3050 0.0 44.040985 1 >>END_MODULE