SRR2934255.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934255.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	362235
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2999	0.8279155796651345	No Hit
CCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTGC	1200	0.33127665741852663	No Hit
CTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTGCT	1100	0.3036702693003161	Illumina Single End Adapter 2 (95% over 21bp)
CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1076	0.29704473615194554	No Hit
TCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTGC	686	0.1893798224909244	No Hit
GCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTGC	576	0.1590127955608928	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCC	430	0.11870746890830539	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	418	0.11539470233412011	No Hit
CGCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTG	364	0.1004872527502864	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGGGC	65	0.0	45.000004	4
TAGGGCC	75	0.0	45.000004	5
TCGTTTG	70	0.0	45.0	1
ATGATCG	20	7.0268824E-4	45.0	27
GGTAACA	40	6.7921064E-9	45.0	8
ATCCGGT	20	7.0268824E-4	45.0	21
CCATCGA	20	7.0268824E-4	45.0	15
TATTCGA	20	7.0268824E-4	45.0	14
GCGATTA	20	7.0268824E-4	45.0	23
ATGACCG	20	7.0268824E-4	45.0	42
TCCGTAG	35	1.2088458E-7	45.0	1
CTATTCG	20	7.0268824E-4	45.0	13
ATAGTCG	20	7.0268824E-4	45.0	14
ATTGCGT	20	7.0268824E-4	45.0	12
CCGTTAG	20	7.0268824E-4	45.0	1
TAGTCGA	20	7.0268824E-4	45.0	15
ATTTCGG	20	7.0268824E-4	45.0	2
TGTCCGA	20	7.0268824E-4	45.0	12
TTTCACG	30	2.1613705E-6	44.999996	1
GTAGGGA	130	0.0	43.269234	4