SRR2934251.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934251.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1039807
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC	4162	0.400266587934107	No Hit
CTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGCT	3903	0.3753581193433012	No Hit
GCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC	3198	0.3075570754957411	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGC	3038	0.2921696045516139	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2940	0.282744778598336	No Hit
TCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC	2364	0.22734988319947835	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCG	2342	0.22523410594466087	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTC	1926	0.18522668148993035	No Hit
GCTGTATCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC	1396	0.13425568398750923	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	1340	0.12887006915706473	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC	1337	0.12858155407686234	No Hit
CCTGTATCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC	1201	0.11550220377435427	No Hit
CTGTCACTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGCT	1110	0.10675057967488198	No Hit
CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1107	0.10646206459467959	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTCCGA	30	2.1653013E-6	45.000004	12
AGGTACG	20	7.032977E-4	45.0	44
CGAACGA	20	7.032977E-4	45.0	22
ACGTTAG	25	3.890549E-5	45.0	1
ACGTTAC	20	7.032977E-4	45.0	30
CCTCGTA	25	3.890549E-5	45.0	29
TCGATGC	20	7.032977E-4	45.0	42
CGTTAGG	225	0.0	45.0	2
AACGGCA	20	7.032977E-4	45.0	24
TACGCCC	25	3.890549E-5	45.0	35
CGTACGT	20	7.032977E-4	45.0	13
TACTCGT	20	7.032977E-4	45.0	14
CTCGAAT	25	3.890549E-5	45.0	39
AAAATCG	20	7.032977E-4	45.0	20
ATCGCTA	20	7.032977E-4	45.0	11
CCGTTAG	20	7.032977E-4	45.0	1
GTACGTA	20	7.032977E-4	45.0	14
TATCCGT	20	7.032977E-4	45.0	16
TTAGGGA	1660	0.0	42.966866	4
TAGGGGT	855	0.0	41.842102	5