##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934246.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1289190 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.348584770282116 33.0 31.0 34.0 31.0 34.0 2 32.518279695002285 34.0 31.0 34.0 31.0 34.0 3 32.57944368169161 34.0 31.0 34.0 31.0 34.0 4 36.04706210876597 37.0 35.0 37.0 35.0 37.0 5 35.1632342788883 37.0 35.0 37.0 35.0 37.0 6 26.218008206703434 37.0 0.0 37.0 0.0 37.0 7 31.1626641534607 37.0 19.0 37.0 17.0 37.0 8 34.750748144183554 37.0 32.0 37.0 32.0 37.0 9 37.250927326460804 39.0 37.0 39.0 35.0 39.0 10 37.39038776285885 39.0 37.0 39.0 35.0 39.0 11 37.43259488516045 39.0 37.0 39.0 35.0 39.0 12 37.08506581652045 39.0 37.0 39.0 34.0 39.0 13 37.059149543511815 39.0 37.0 39.0 33.0 39.0 14 37.99341679659321 40.0 37.0 41.0 33.0 41.0 15 38.18827403253206 40.0 37.0 41.0 33.0 41.0 16 38.33762284845523 40.0 37.0 41.0 34.0 41.0 17 38.35635786811874 40.0 37.0 41.0 34.0 41.0 18 38.34182626300235 40.0 37.0 41.0 34.0 41.0 19 38.365924340089514 40.0 37.0 41.0 34.0 41.0 20 38.27952745522382 40.0 37.0 41.0 34.0 41.0 21 38.18394030360149 40.0 37.0 41.0 34.0 41.0 22 38.228435684422 40.0 37.0 41.0 34.0 41.0 23 38.20080360536461 40.0 36.0 41.0 34.0 41.0 24 38.144833577672806 40.0 36.0 41.0 34.0 41.0 25 38.01658793506 40.0 36.0 41.0 34.0 41.0 26 37.98452982105043 40.0 36.0 41.0 34.0 41.0 27 37.94564261280339 40.0 36.0 41.0 34.0 41.0 28 37.860969290795 40.0 36.0 41.0 34.0 41.0 29 37.8237342827667 40.0 36.0 41.0 34.0 41.0 30 37.57286668373165 40.0 36.0 41.0 33.0 41.0 31 37.546287203592954 40.0 35.0 41.0 33.0 41.0 32 37.49709585088311 40.0 35.0 41.0 33.0 41.0 33 37.40193997781553 40.0 35.0 41.0 33.0 41.0 34 37.2861983105671 40.0 35.0 41.0 32.0 41.0 35 37.242161357131224 40.0 35.0 41.0 32.0 41.0 36 37.160859919794596 39.0 35.0 41.0 32.0 41.0 37 37.077523095897426 39.0 35.0 41.0 32.0 41.0 38 36.967440796158826 39.0 35.0 41.0 32.0 41.0 39 36.82797182727139 39.0 35.0 41.0 31.0 41.0 40 36.657144408504564 39.0 35.0 41.0 31.0 41.0 41 36.49899006352826 39.0 35.0 41.0 31.0 41.0 42 36.434105135782936 39.0 35.0 41.0 31.0 41.0 43 36.331659414050684 38.0 35.0 40.0 31.0 41.0 44 36.20413748167454 38.0 35.0 40.0 30.0 41.0 45 36.1094415873533 38.0 35.0 40.0 30.0 41.0 46 35.98310722236443 37.0 35.0 40.0 30.0 41.0 47 35.83168656288057 37.0 34.0 40.0 30.0 41.0 48 35.72957981368146 37.0 34.0 40.0 30.0 41.0 49 35.657128894887485 37.0 34.0 40.0 30.0 41.0 50 35.49419868289391 36.0 34.0 40.0 30.0 41.0 51 34.496674656179465 35.0 33.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 8.0 9 15.0 10 20.0 11 18.0 12 19.0 13 18.0 14 19.0 15 38.0 16 65.0 17 158.0 18 214.0 19 450.0 20 713.0 21 1279.0 22 1988.0 23 2966.0 24 4383.0 25 6392.0 26 8334.0 27 10181.0 28 12322.0 29 15395.0 30 19893.0 31 27092.0 32 38600.0 33 63325.0 34 95656.0 35 112454.0 36 133328.0 37 207461.0 38 258614.0 39 267614.0 40 156.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.00990544450391 4.903311381565169 50.844406177522316 17.2423769964086 2 21.429502245596073 5.019818645816365 50.825789837029454 22.72488927155811 3 22.999790566169455 5.7090110844794015 49.29630232936961 21.99489601998154 4 20.368991382185715 4.8542883516006174 50.07446536197146 24.7022549042422 5 18.539237815992987 8.445768273101715 48.18917304664169 24.825820864263605 6 16.822888790635982 31.408791566797756 38.83182463407256 12.936495008493706 7 84.09582761268703 2.472870562135915 9.028071890101536 4.403229935075513 8 85.19000302515532 3.243044081942925 7.219727115475609 4.347225777426136 9 79.65606310939427 4.9110681901038635 9.48556845771376 5.947300242788107 10 43.636314274854755 24.019345480495506 17.088869755427826 15.255470489221915 11 32.78965862285621 23.76779217958563 23.97629519310575 19.466254004452406 12 29.788471831149792 21.49132400964947 28.57592752038102 20.144276638819726 13 27.81009781335567 21.302368153646864 30.67709181734267 20.21044221565479 14 21.822694870422513 23.863278492696967 32.831002412367454 21.483024224513066 15 20.007446536197147 23.585972587438626 35.479952528331744 20.926628348032487 16 25.184805963434403 23.780358209418317 29.9013333953878 21.133502431759478 17 25.572180981856825 22.855203655008182 28.10555465059456 23.467060712540434 18 25.365229330044446 22.416866404486537 30.698655745080245 21.51924852038877 19 25.56093360947572 24.144462802224652 28.515346845693806 21.77925674260582 20 25.652231245976154 27.746802255679924 27.8664122433466 18.734554254997324 21 25.31969686392231 24.975139428633483 30.45935820166151 19.2458055057827 22 23.689913821857136 22.597444907267352 30.996749897222287 22.715891373653225 23 22.675478401166625 23.893297341741714 30.841536158363002 22.589688098728658 24 23.23102102870795 24.661376523243277 28.813208293579688 23.294394154469085 25 23.7602680753031 25.37221045772927 26.450174140351695 24.41734732661594 26 22.090615037349032 25.19403656559545 27.013938984944037 25.70140941211148 27 22.25637803582094 24.256083277096472 30.46083199528386 23.026706691798726 28 20.365345682172528 24.881980158083756 29.269774044167267 25.482900115576445 29 23.452710616743847 25.341958904428363 27.832437421947116 23.372893056880677 30 25.741744816512696 23.980483869716643 27.8622235667357 22.41554774703496 31 24.045796197612454 25.877256261683694 27.3000100838511 22.776937456852753 32 27.1966118260303 26.225381828900318 24.722732878784353 21.855273466285034 33 26.126482520031956 25.656264786416276 25.48072820918561 22.736524484366154 34 22.56424576672174 25.62973650121394 28.55389818413112 23.252119547933198 35 23.486607870057945 27.745018189716024 25.666271069431197 23.10210287079484 36 26.08630225180152 27.56847322737533 24.32473103266392 22.020493488159232 37 23.67098720902272 27.98749602463562 25.6388895352896 22.702627231052055 38 23.61793063861805 27.425204973665636 25.40936557062962 23.547498817086698 39 22.75389973549283 26.611050349444227 26.04131276227709 24.59373715278586 40 23.732886541161506 26.70265825828621 27.124395938535052 22.440059262017236 41 21.311521187722523 26.90402500795073 25.912006763937047 25.8724470403897 42 21.705722197658993 26.468325072332238 27.61571219137598 24.210240538632785 43 22.02561298179477 24.887409924060844 27.910470915846386 25.176506178298002 44 23.655783864286878 23.835819390469982 26.966079476260283 25.54231726898285 45 23.364825976000432 23.38476097394488 25.596847633009872 27.653565417044813 46 23.410125737866412 24.834586057912333 26.968018678394962 24.787269525826293 47 20.827263630651803 25.7654806506411 29.409163893607616 23.998091825099483 48 20.849292966901697 26.932337359116964 28.21965730419876 23.998712369782577 49 23.68192430906228 24.309527687928078 28.90217888751852 23.10636911549112 50 22.05508885424181 25.340097270379076 26.621134200544528 25.983679674834587 51 20.684150513112883 25.688067701424927 25.47948711981942 28.14829466564277 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 268.0 1 888.0 2 1508.0 3 3598.0 4 5688.0 5 3846.0 6 2004.0 7 1999.5 8 1995.0 9 2052.5 10 2110.0 11 2150.0 12 2190.0 13 2224.0 14 2258.0 15 2197.0 16 2136.0 17 2099.0 18 2062.0 19 2365.5 20 2669.0 21 3158.0 22 3647.0 23 4068.0 24 4489.0 25 5772.0 26 8430.5 27 9806.0 28 12187.5 29 14569.0 30 16899.0 31 19229.0 32 22487.0 33 25745.0 34 28961.0 35 32177.0 36 33742.0 37 35307.0 38 38303.5 39 41300.0 40 46883.5 41 52467.0 42 57906.5 43 63346.0 44 69910.5 45 76475.0 46 91121.5 47 105768.0 48 118585.5 49 131403.0 50 130264.5 51 129126.0 52 116719.5 53 104313.0 54 96567.5 55 88822.0 56 83367.5 57 77913.0 58 71595.0 59 65277.0 60 58980.5 61 52684.0 62 45687.5 63 38691.0 64 33889.5 65 29088.0 66 24609.5 67 20131.0 68 17044.5 69 13958.0 70 11497.5 71 9037.0 72 7429.5 73 5822.0 74 4514.0 75 2560.5 76 1915.0 77 1353.0 78 791.0 79 591.0 80 391.0 81 284.5 82 178.0 83 120.5 84 63.0 85 69.0 86 75.0 87 46.0 88 17.0 89 16.5 90 16.0 91 9.5 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1289190.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.43447834753076 #Duplication Level Percentage of deduplicated Percentage of total 1 69.94401063820015 21.98653487945964 2 11.055940085760831 6.950754184748924 3 4.275405751274187 4.031854485460106 4 2.2506803386315157 2.8299584948770233 5 1.4662770974973045 2.3045827836379633 6 1.1737189513319537 2.2137145777038483 7 0.9465113622982801 2.0827163646699987 8 0.8287292817824617 2.0840538131324404 9 0.7201474551381937 2.0373713627013834 >10 7.143618338656486 45.61606705061376 >50 0.13739878085153642 2.822851151632151 >100 0.05193364219265946 2.7896568079790516 >500 0.0030699689369342305 0.6887892494399596 >1k 0.002558307447445192 1.5610947939437823 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGCT 3063 0.23759104554022292 No Hit CCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 2687 0.20842544543473035 No Hit GCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 2269 0.17600198574298592 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2215 0.1718133091320907 No Hit TCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 1830 0.14194959625811557 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGC 1823 0.14140661966040693 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCG 1495 0.11596428765348786 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1492 0.11573158339732702 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 1310 0.10161419185690239 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.25434575198380377 0.0 2 0.0 0.0 0.0 0.8370372094105601 0.0 3 0.0 0.0 0.0 1.179965714906259 0.0 4 0.0 0.0 0.0 1.5746321333550524 0.0 5 0.0 0.0 0.0 2.336971276537981 0.0 6 0.0 0.0 0.0 2.782367222829839 0.0 7 0.0 0.0 0.0 3.3801068888216634 0.0 8 0.0 0.0 0.0 4.303322241097123 0.0 9 0.0 0.0 0.0 4.72102638090584 0.0 10 0.0 0.0 0.0 5.65897966940482 0.0 11 0.0 0.0 0.0 7.3368549244099 0.0 12 0.0 0.0 0.0 8.933749098271008 0.0 13 0.0 0.0 0.0 9.423048580891878 0.0 14 0.0 0.0 0.0 9.616580953932313 0.0 15 0.0 0.0 0.0 9.920880552905313 0.0 16 0.0 0.0 0.0 10.561903210543054 0.0 17 0.0 0.0 0.0 11.38024651137536 0.0 18 0.0 0.0 0.0 12.239080352779652 0.0 19 0.0 0.0 0.0 12.900193144532613 0.0 20 0.0 0.0 0.0 13.599857274722888 0.0 21 0.0 0.0 0.0 14.606535886874704 0.0 22 0.0 0.0 0.0 15.632373816117097 0.0 23 0.0 0.0 0.0 16.538136349180494 0.0 24 0.0 0.0 0.0 17.265337149683134 0.0 25 0.0 0.0 0.0 17.941420581915775 0.0 26 0.0 0.0 0.0 18.534816435125933 0.0 27 0.0 0.0 0.0 19.164203879955632 0.0 28 7.75680853869484E-5 0.0 0.0 19.76714060766838 0.0 29 7.75680853869484E-5 0.0 0.0 20.45579006973371 0.0 30 7.75680853869484E-5 0.0 0.0 21.3288964388492 0.0 31 7.75680853869484E-5 0.0 0.0 22.018166445597622 0.0 32 7.75680853869484E-5 0.0 0.0 22.674159743715045 0.0 33 7.75680853869484E-5 0.0 0.0 23.32790356735625 0.0 34 7.75680853869484E-5 0.0 0.0 24.025163086899525 0.0 35 7.75680853869484E-5 0.0 0.0 24.792311451376445 0.0 36 7.75680853869484E-5 0.0 0.0 25.44923556651851 0.0 37 7.75680853869484E-5 0.0 0.0 26.129973083874372 0.0 38 7.75680853869484E-5 0.0 0.0 26.89665603983897 0.0 39 7.75680853869484E-5 0.0 0.0 28.239825006399368 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCAC 25 3.8910715E-5 45.0 15 ACGGATA 25 3.8910715E-5 45.0 24 TCGTTAG 230 0.0 42.065216 1 TTAGGGA 2345 0.0 41.449894 4 CTTAGGG 2285 0.0 40.9628 3 CGTTTAT 500 0.0 40.949997 1 TTTAGGG 4330 0.0 40.635105 3 GTTAGGG 1825 0.0 40.56164 3 TTCAGGG 1825 0.0 40.315067 3 TGTAGGG 1795 0.0 40.236767 3 TTAGGGG 4430 0.0 40.073364 4 TAGGGAT 1315 0.0 39.86692 5 ACACGCG 345 0.0 39.782608 36 CGTTAGG 415 0.0 39.578316 2 TTTTAGG 2440 0.0 39.559425 2 TAGGGAG 1350 0.0 39.5 5 TAGGGCG 525 0.0 39.428574 5 TAGGGTA 400 0.0 39.375 5 TTCGGGA 615 0.0 39.14634 4 TAGGGAA 1060 0.0 39.056602 5 >>END_MODULE