##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934241.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1846614 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.42397328299255 33.0 31.0 34.0 31.0 34.0 2 32.58741187925576 34.0 31.0 34.0 31.0 34.0 3 32.63847073616901 34.0 31.0 34.0 31.0 34.0 4 36.085637821439676 37.0 35.0 37.0 35.0 37.0 5 35.21680221204865 37.0 35.0 37.0 35.0 37.0 6 26.202411548921432 37.0 0.0 37.0 0.0 37.0 7 31.1996215776551 37.0 19.0 37.0 17.0 37.0 8 34.84579072832763 37.0 32.0 37.0 32.0 37.0 9 37.389400816846404 39.0 37.0 39.0 35.0 39.0 10 37.42942271638794 39.0 37.0 39.0 35.0 39.0 11 37.42354926367936 39.0 37.0 39.0 35.0 39.0 12 37.17850184174928 39.0 37.0 39.0 34.0 39.0 13 37.19528986566765 39.0 37.0 39.0 34.0 39.0 14 38.12756591252963 40.0 38.0 41.0 33.0 41.0 15 38.316825281298634 40.0 38.0 41.0 33.0 41.0 16 38.48512141682019 40.0 38.0 41.0 34.0 41.0 17 38.50401166675873 40.0 38.0 41.0 34.0 41.0 18 38.4854051794257 40.0 38.0 41.0 34.0 41.0 19 38.509470306192846 40.0 38.0 41.0 34.0 41.0 20 38.42641342478721 40.0 38.0 41.0 34.0 41.0 21 38.3460977767958 40.0 37.0 41.0 34.0 41.0 22 38.40425503110016 40.0 37.0 41.0 34.0 41.0 23 38.37115769727729 40.0 37.0 41.0 34.0 41.0 24 38.32253194224673 40.0 37.0 41.0 34.0 41.0 25 38.221810297116775 40.0 37.0 41.0 34.0 41.0 26 38.19171142426084 40.0 37.0 41.0 34.0 41.0 27 38.16775027157814 40.0 37.0 41.0 34.0 41.0 28 38.0856096617918 40.0 37.0 41.0 34.0 41.0 29 38.0709287376788 40.0 37.0 41.0 34.0 41.0 30 37.833430809037516 40.0 36.0 41.0 34.0 41.0 31 37.81312337066653 40.0 36.0 41.0 33.0 41.0 32 37.78026214466044 40.0 36.0 41.0 33.0 41.0 33 37.734987387726946 40.0 36.0 41.0 33.0 41.0 34 37.62987771131379 40.0 36.0 41.0 33.0 41.0 35 37.619159174575735 40.0 36.0 41.0 33.0 41.0 36 37.57346202292412 40.0 36.0 41.0 33.0 41.0 37 37.46575299439948 40.0 36.0 41.0 33.0 41.0 38 37.354854885753056 40.0 36.0 41.0 32.0 41.0 39 37.36259987198191 40.0 36.0 41.0 32.0 41.0 40 37.34738012383747 40.0 36.0 41.0 33.0 41.0 41 37.256928085674645 40.0 36.0 41.0 32.0 41.0 42 37.23872828864072 40.0 35.0 41.0 32.0 41.0 43 37.17821320535857 40.0 35.0 41.0 32.0 41.0 44 37.06258481740093 39.0 35.0 41.0 32.0 41.0 45 37.04551682159888 39.0 35.0 41.0 32.0 41.0 46 37.00087024142566 39.0 35.0 41.0 32.0 41.0 47 36.90413102034318 39.0 35.0 41.0 31.0 41.0 48 36.8431133956528 39.0 35.0 41.0 31.0 41.0 49 36.815413508183084 39.0 35.0 41.0 31.0 41.0 50 36.740867338815804 39.0 35.0 41.0 31.0 41.0 51 35.737719956634145 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 14.0 10 17.0 11 15.0 12 8.0 13 12.0 14 24.0 15 29.0 16 78.0 17 122.0 18 264.0 19 572.0 20 928.0 21 1604.0 22 2452.0 23 3804.0 24 5691.0 25 8348.0 26 11082.0 27 13486.0 28 16013.0 29 19469.0 30 24702.0 31 33367.0 32 48542.0 33 78945.0 34 113730.0 35 126049.0 36 154981.0 37 273500.0 38 414985.0 39 493440.0 40 337.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.008111061651217 3.971701720012953 57.387683619857754 15.63250359847808 2 19.726104101885937 4.87205230762899 54.748637235502386 20.653206354982686 3 20.36137492729937 5.075018385000872 53.33756811114829 21.226038576551463 4 18.987400723702947 4.3935007532705805 53.172563405237916 23.446535117788557 5 18.546973000313006 7.292590655112546 50.83368803659021 23.326748307984236 6 16.008434897601774 30.975287742863422 39.85369979865852 13.162577560876285 7 86.09644462784317 1.41399339547951 8.782777559359996 3.7067844173173174 8 88.2788714912808 2.2556961010801393 6.0162546152038265 3.4491777924352354 9 83.28881942842413 4.297649644159526 7.807641445369741 4.605889482046599 10 40.31952535830444 34.37984332405148 14.112857370300452 11.187773947343626 11 26.947104267594636 23.564372413509265 31.038863563256857 18.44965975563924 12 26.00115671168961 21.782895613268394 32.01654487618961 20.199402798852386 13 25.793316849108695 22.003082398378872 33.84768013239366 18.355920620118766 14 19.956200916921457 24.91554813296119 35.00444597517402 20.12380497494333 15 17.817583967196178 26.18506087357726 36.67182204835445 19.325533110872115 16 24.09653560516708 26.17184750034387 30.563723658544774 19.167893235944273 17 24.289808265289878 25.300793777151043 29.57938150582634 20.83001645173274 18 23.99044954711705 24.42714070184673 31.576008846461683 20.006400904574534 19 23.149721598558227 26.496604054772682 30.162719442179036 20.190954904490056 20 22.88799933283296 30.370505151590965 29.812727511001214 16.92876800457486 21 23.549642751544177 26.958097360899462 32.384948884823785 17.10731100273257 22 21.613991879190777 23.385937721689533 33.875298248578204 21.124772150541478 23 20.26969361220049 25.51865197599498 32.90530668564194 21.306347726162585 24 20.747053796841136 27.042413845015794 30.803513890829375 21.407018467313687 25 22.329571854215338 27.31919069172009 28.113617680793062 22.23761977327151 26 20.387260142076254 27.274514327303915 28.343443729983637 23.994781800636193 27 19.847353047252973 26.274955134099493 32.09463374587217 21.78305807277536 28 17.95193797945862 26.45815530479028 31.622959643975406 23.966947071775692 29 21.134140648776626 26.675796890958264 30.38588465158393 21.804177808681185 30 24.635630402455522 24.76115744817271 30.613598727183916 19.98961342218785 31 22.53692433827535 25.992113132468397 30.83091539433796 20.640047134918287 32 24.232947437851116 26.978134033425498 28.29616801345598 20.492750515267403 33 24.623283479925963 25.850665055068355 28.23524569834302 21.29080576666266 34 20.768498451760898 25.521522093951415 31.298311395884575 22.41166805840311 35 20.544358485314202 27.636095036645447 29.33222644255919 22.487320035481158 36 24.825708025607952 26.9143957535251 27.67140290282647 20.58849331804048 37 21.083399129433655 28.285933064517003 29.70994479625953 20.92072300978981 38 21.313929169821087 27.83657006824382 30.1583330354909 20.691167726444185 39 21.22522627901662 26.647149864562923 28.549658997494877 23.57796485892558 40 23.310285744611488 24.3357301525928 29.629635646648406 22.724348456147307 41 19.98750144859727 25.367835400359795 29.096010319427883 25.548652831615055 42 20.30007354000349 25.64558700410589 31.355388835999292 22.698950619891324 43 20.831641046802417 25.59679499884654 30.62096355816646 22.950600396184583 44 21.495504745442197 25.14445357827895 29.356107990083473 24.003933686195385 45 22.135432743388712 23.341044744597408 27.957548247765914 26.56597426424797 46 22.73718275719777 24.337787973014393 29.635321729392285 23.289707540395558 47 19.64509096107795 25.406229997173202 32.434607340786975 22.514071700961868 48 19.540900263942547 27.383199737465436 30.85528432038314 22.220615678208873 49 22.469936868235592 24.322408473021433 31.296416034969948 21.911238623773023 50 21.0700232966933 24.653609254559967 29.453854460109152 24.822512988637584 51 19.67124694169978 24.526674226449057 28.355628193006226 27.446450638844933 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 220.0 1 867.5 2 1515.0 3 5047.0 4 8579.0 5 5711.5 6 2844.0 7 2870.0 8 2896.0 9 3019.5 10 3143.0 11 3234.0 12 3325.0 13 3426.0 14 3527.0 15 3685.0 16 3843.0 17 3932.0 18 4021.0 19 4588.0 20 5155.0 21 5918.5 22 6682.0 23 8642.5 24 10603.0 25 12713.0 26 18639.0 27 22455.0 28 27374.5 29 32294.0 30 37095.0 31 41896.0 32 48247.5 33 54599.0 34 60685.0 35 66771.0 36 71543.5 37 76316.0 38 80317.0 39 84318.0 40 92723.0 41 101128.0 42 107950.5 43 114773.0 44 124247.0 45 133721.0 46 156995.5 47 180270.0 48 188912.0 49 197554.0 50 188767.0 51 179980.0 52 157655.5 53 135331.0 54 117834.0 55 100337.0 56 90005.5 57 79674.0 58 70559.0 59 61444.0 60 50647.5 61 39851.0 62 33865.5 63 27880.0 64 23317.5 65 18755.0 66 14661.5 67 10568.0 68 8624.0 69 6680.0 70 5297.0 71 3914.0 72 3123.5 73 2333.0 74 1835.5 75 1026.0 76 714.0 77 505.5 78 297.0 79 236.0 80 175.0 81 109.5 82 44.0 83 27.5 84 11.0 85 8.0 86 5.0 87 5.0 88 5.0 89 4.5 90 4.0 91 3.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1846614.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.83566684369246 #Duplication Level Percentage of deduplicated Percentage of total 1 71.90223071654273 23.609576931267075 2 12.016034154340517 7.8910898854871 3 4.42689569701268 4.360802167766522 4 2.103754938437532 2.763127851172301 5 1.2831144836307788 2.106595985340837 6 0.832952575260465 1.6410331954708974 7 0.5966635312216146 1.3714291450281821 8 0.47615904972927353 1.250799993721569 9 0.3866964636129099 1.1427692623944794 >10 5.734385640300263 43.979375332013504 >50 0.18147700728607447 3.8178634034570216 >100 0.05357441102381975 3.0179708145798 >500 0.00351948286529599 0.7943779918609827 >1k 0.0025418487360471037 2.2531880404397633 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGCT 4161 0.225331336164461 TruSeq Adapter, Index 16 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGC 3996 0.21639606328122718 No Hit CCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGC 3888 0.21054752103038318 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3688 0.19971688723252395 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTC 3177 0.17204461787899367 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCG 3146 0.17036586964032546 No Hit TCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGC 3098 0.16776651752883928 TruSeq Adapter, Index 13 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGC 2868 0.15531128866130117 TruSeq Adapter, Index 13 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0830633797859216E-4 0.0 0.0 0.237949024538967 0.0 2 1.0830633797859216E-4 0.0 0.0 0.8182543834282638 0.0 3 1.0830633797859216E-4 0.0 0.0 1.164672205452791 0.0 4 1.0830633797859216E-4 0.0 0.0 1.6040710186319393 0.0 5 1.0830633797859216E-4 0.0 0.0 2.4293111608598226 0.0 6 1.0830633797859216E-4 0.0 0.0 2.9571420989984913 0.0 7 1.0830633797859216E-4 0.0 0.0 3.6130452817968455 0.0 8 1.0830633797859216E-4 0.0 0.0 4.654302415123031 0.0 9 1.0830633797859216E-4 0.0 0.0 5.150182983558015 0.0 10 1.6245950696788827E-4 0.0 0.0 6.172215741893 0.0 11 1.6245950696788827E-4 0.0 0.0 7.947194161855157 0.0 12 1.6245950696788827E-4 0.0 0.0 9.780658004325755 0.0 13 1.6245950696788827E-4 0.0 0.0 10.316990989995743 0.0 14 1.6245950696788827E-4 0.0 0.0 10.532953827925056 0.0 15 2.1661267595718433E-4 0.0 0.0 10.805073502096269 0.0 16 2.1661267595718433E-4 0.0 0.0 11.351641436705235 0.0 17 2.1661267595718433E-4 0.0 0.0 12.167621387035949 0.0 18 2.1661267595718433E-4 0.0 0.0 13.024216214108634 0.0 19 2.1661267595718433E-4 0.0 0.0 13.7630278986296 0.0 20 2.1661267595718433E-4 0.0 0.0 14.49766978913839 0.0 21 2.1661267595718433E-4 5.415316898929608E-5 0.0 15.543475788659677 0.0 22 2.1661267595718433E-4 5.415316898929608E-5 0.0 16.70971843601316 0.0 23 2.1661267595718433E-4 5.415316898929608E-5 0.0 17.790832301715465 0.0 24 2.1661267595718433E-4 5.415316898929608E-5 0.0 18.558236859462777 0.0 25 2.1661267595718433E-4 5.415316898929608E-5 0.0 19.247931619710453 0.0 26 2.1661267595718433E-4 5.415316898929608E-5 0.0 19.86982661238353 0.0 27 2.1661267595718433E-4 5.415316898929608E-5 0.0 20.55091101876191 0.0 28 2.1661267595718433E-4 5.415316898929608E-5 0.0 21.1924636117781 0.0 29 2.707658449464804E-4 5.415316898929608E-5 0.0 21.951095356149146 0.0 30 3.2491901393577653E-4 5.415316898929608E-5 0.0 22.84711369024604 0.0 31 3.2491901393577653E-4 5.415316898929608E-5 0.0 23.572224623012715 0.0 32 3.2491901393577653E-4 5.415316898929608E-5 0.0 24.24437375650786 0.0 33 3.2491901393577653E-4 5.415316898929608E-5 0.0 24.91820163824167 0.0 34 3.2491901393577653E-4 5.415316898929608E-5 0.0 25.648023896710413 0.0 35 3.2491901393577653E-4 5.415316898929608E-5 0.0 26.456314097044643 0.0 36 3.2491901393577653E-4 5.415316898929608E-5 0.0 27.139618783351583 0.0 37 3.2491901393577653E-4 5.415316898929608E-5 0.0 27.854765533024228 0.0 38 3.2491901393577653E-4 5.415316898929608E-5 0.0 28.696576544962834 0.0 39 3.2491901393577653E-4 5.415316898929608E-5 0.0 30.202251255541224 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGTAG 35 1.2124656E-7 45.000004 1 CGAACGT 20 7.034401E-4 45.0 37 GCGAAAT 20 7.034401E-4 45.0 9 ACGTCTA 20 7.034401E-4 45.0 44 TCGAGTA 20 7.034401E-4 45.0 11 CCGAACG 20 7.034401E-4 45.0 36 CGATAGG 50 2.1827873E-11 45.0 2 CGTTTAT 840 0.0 43.392857 1 TTAGGGA 5860 0.0 42.235493 4 TAGGGAT 4010 0.0 42.194515 5 CGTTAGG 540 0.0 42.083332 2 TAGGGGT 2365 0.0 41.575054 5 TAGGGAC 2420 0.0 41.559917 5 TTTAGGG 7970 0.0 41.160603 3 TAGGGCG 690 0.0 41.086956 5 TATCGCG 55 6.184564E-11 40.909092 1 AGGGCGA 1025 0.0 40.82927 6 CTAGGGA 2735 0.0 40.72212 4 TCGTTAG 360 0.0 40.625 1 GCGCGAC 100 0.0 40.5 9 >>END_MODULE