##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934240.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1303519 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.21046030015673 33.0 31.0 34.0 30.0 34.0 2 32.381744339744955 34.0 31.0 34.0 30.0 34.0 3 32.40182920233614 34.0 31.0 34.0 30.0 34.0 4 35.94921746441747 37.0 35.0 37.0 35.0 37.0 5 35.091335070681744 37.0 35.0 37.0 35.0 37.0 6 26.062914311183803 36.0 0.0 37.0 0.0 37.0 7 31.09696061200489 37.0 19.0 37.0 17.0 37.0 8 34.74719969559324 37.0 32.0 37.0 32.0 37.0 9 37.29934814912556 39.0 37.0 39.0 35.0 39.0 10 37.20443046860076 39.0 37.0 39.0 34.0 39.0 11 37.272526906013645 39.0 37.0 39.0 34.0 39.0 12 37.17082604856546 39.0 37.0 39.0 34.0 39.0 13 37.25262385895411 39.0 37.0 39.0 34.0 39.0 14 38.4156893762193 40.0 38.0 41.0 34.0 41.0 15 38.50466774937688 40.0 38.0 41.0 34.0 41.0 16 38.56965567820645 40.0 38.0 41.0 34.0 41.0 17 38.568277869367456 40.0 38.0 41.0 34.0 41.0 18 38.533561075826285 40.0 38.0 41.0 35.0 41.0 19 38.50641686082059 40.0 38.0 41.0 34.0 41.0 20 38.40071452736784 40.0 37.0 41.0 34.0 41.0 21 38.302834097546715 40.0 37.0 41.0 34.0 41.0 22 38.30393266227804 40.0 37.0 41.0 34.0 41.0 23 38.221379205059534 40.0 37.0 41.0 34.0 41.0 24 38.1644893553527 40.0 37.0 41.0 34.0 41.0 25 38.033185553873786 40.0 37.0 41.0 34.0 41.0 26 38.00312998889928 40.0 37.0 41.0 34.0 41.0 27 37.99381903907806 40.0 37.0 41.0 34.0 41.0 28 37.949539669157105 40.0 37.0 41.0 34.0 41.0 29 37.93573779898874 40.0 37.0 41.0 34.0 41.0 30 37.68066748547585 40.0 36.0 41.0 33.0 41.0 31 37.68891132388558 40.0 36.0 41.0 33.0 41.0 32 37.52507021378285 40.0 36.0 41.0 33.0 41.0 33 37.36495977427256 40.0 36.0 41.0 33.0 41.0 34 37.24555299922748 40.0 36.0 41.0 32.0 41.0 35 37.17131779437047 40.0 36.0 41.0 32.0 41.0 36 37.073370622138995 40.0 36.0 41.0 32.0 41.0 37 37.0476809313865 40.0 36.0 41.0 32.0 41.0 38 36.978810435444366 40.0 36.0 41.0 31.0 41.0 39 36.901552643267955 40.0 36.0 41.0 31.0 41.0 40 36.84328958764698 39.0 36.0 41.0 31.0 41.0 41 36.77030407688726 39.0 35.0 41.0 31.0 41.0 42 36.69139920476802 39.0 35.0 41.0 31.0 41.0 43 36.63382275210411 39.0 35.0 41.0 31.0 41.0 44 36.565231500269654 39.0 35.0 41.0 31.0 41.0 45 36.552579594160115 39.0 35.0 41.0 30.0 41.0 46 36.47285079849239 39.0 35.0 41.0 30.0 41.0 47 36.37847396163769 39.0 35.0 41.0 30.0 41.0 48 36.354662264224764 39.0 35.0 41.0 30.0 41.0 49 36.34707127398987 39.0 35.0 41.0 30.0 41.0 50 36.28317193688776 39.0 35.0 40.0 30.0 41.0 51 35.317170674152045 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 5.0 11 3.0 12 5.0 13 6.0 14 11.0 15 17.0 16 41.0 17 68.0 18 161.0 19 360.0 20 720.0 21 1271.0 22 2113.0 23 3514.0 24 5978.0 25 9814.0 26 13076.0 27 13679.0 28 13347.0 29 14522.0 30 17836.0 31 23549.0 32 32124.0 33 48393.0 34 72539.0 35 98120.0 36 126761.0 37 212356.0 38 297030.0 39 295973.0 40 123.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.52863211046406 4.655474910607364 58.228840546244435 14.58705243268414 2 21.86205187649739 4.741472889923354 52.94107719181692 20.455398041762336 3 18.668619329676055 4.6194953813484885 55.32623613464782 21.38564915432763 4 16.855450515105648 4.097830564801893 55.42496887272069 23.621750047371766 5 16.47563249941121 7.28735062549913 53.74666575631042 22.49035111877924 6 14.24160292255042 30.99103273523439 42.544757690528485 12.222606651686704 7 81.5939008177096 1.1266425729122476 12.962987114111876 4.316469495266275 8 83.3568977513945 1.6683301125645273 10.289608360138978 4.685163775902001 9 78.72528133460271 3.5144865552400844 12.293184832748889 5.467047277408308 10 35.98067999008837 26.422322958084997 22.29511038964526 15.30188666218137 11 23.60648367994636 26.095055001116208 28.999270436410978 21.299190882526453 12 20.858767689615572 21.99047347986489 35.00225159740671 22.148507233112827 13 21.885219931585194 23.70299167100748 35.93434387991276 18.47744451749457 14 20.228320415736174 25.76594587420667 34.18807090652303 19.817662803534127 15 17.191157167636224 26.221712149957156 35.932502709972006 20.654627972434618 16 18.466167351607456 26.036137563012122 33.581558841873424 21.916136243506998 17 18.65435026263522 26.432986400658525 30.833689420714233 24.07897391599202 18 19.39127853142148 25.905337781804484 33.22605961247976 21.477324074294277 19 19.906422537761244 28.745495846243895 31.235217898626715 20.11286371736814 20 20.484780045400182 28.463566699066146 31.934632329870144 19.11702092566353 21 20.243816929404172 28.608328685657824 32.28545191899773 18.862402465940274 22 19.16166929672678 25.37400682306894 31.868043350346255 23.596280529858024 23 18.07100625307341 27.501785551265463 30.13964506846467 24.287563127196456 24 19.382532974202906 26.27295804664144 31.238363230608833 23.10614574854682 25 17.694640431017884 28.914346472893758 28.93736109715317 24.453651998935193 26 17.263653234053358 29.259258975128095 30.502508977621346 22.974578813197198 27 18.04837520588499 27.4417940973626 31.470734220214663 23.03909647653774 28 15.857766553460287 26.446641744385772 33.01869784790249 24.676893854251453 29 16.275788845425346 25.487468920667823 32.04364493344554 26.19309730046129 30 18.080595679848166 27.73239208634473 30.894524744173275 23.292487489633828 31 17.25651870053294 29.23877595953722 29.00655840075979 24.498146939170045 32 16.099036531113086 31.119684484844484 26.848246937712457 25.933032046329973 33 17.246238835030407 28.636790104325293 26.987715560724467 27.12925549991983 34 15.281173500347906 28.123333837097885 28.111366232482993 28.484126430071218 35 14.573627235199488 29.405862131660527 25.96233733455362 30.058173298586365 36 16.132561167117625 31.05148448162244 26.525275043938752 26.29067930732118 37 14.876959982938493 28.314431933865176 30.344935516858595 26.46367256633774 38 15.418877668833368 28.45274982566422 28.796741742928184 27.331630762574232 39 16.524730364497948 29.25726437435895 27.814017287051435 26.40398797409167 40 17.503772480493186 27.71536126439277 27.501171827951875 27.279694427162166 41 15.839278138638562 28.07377567952596 25.909863991242165 30.177082190593307 42 16.999138485898555 28.490033516964463 26.96585166767803 27.544976329458947 43 17.27730857778061 27.881373420717303 28.946029938957548 25.89528806254454 44 17.003511264507846 26.527576506364692 27.63174146291692 28.83717076621054 45 18.061953834198043 26.11983407990217 25.86628963597769 29.951922449922098 46 18.753466577779072 26.714301824522696 27.343751798017518 27.18847979968071 47 14.601321499724977 27.64961615442506 30.030555749475074 27.718506596374894 48 14.977150313881118 27.007968430072747 29.710115464369906 28.304765791676225 49 17.754401738678148 24.98828172048125 30.537951498980835 26.719365041859767 50 17.175200361483032 24.207855811844706 28.003964652605756 30.612979174066506 51 15.529808157763714 24.40892691245774 25.62709097450824 34.43417395527031 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 77.0 1 326.0 2 575.0 3 7275.0 4 13975.0 5 9163.5 6 4352.0 7 4487.0 8 4622.0 9 5092.0 10 5562.0 11 6045.5 12 6529.0 13 6608.5 14 6688.0 15 6555.0 16 6422.0 17 6293.5 18 6165.0 19 6165.0 20 6165.0 21 6045.5 22 5926.0 23 6401.0 24 6876.0 25 7200.0 26 8662.0 27 9800.0 28 12185.5 29 14571.0 30 16160.5 31 17750.0 32 20588.0 33 23426.0 34 28596.0 35 33766.0 36 37067.0 37 40368.0 38 46431.5 39 52495.0 40 61415.5 41 70336.0 42 80632.5 43 90929.0 44 104180.5 45 117432.0 46 141461.0 47 165490.0 48 175883.0 49 186276.0 50 169571.5 51 152867.0 52 123606.5 53 94346.0 54 76084.0 55 57822.0 56 47222.0 57 36622.0 58 30334.5 59 24047.0 60 19262.5 61 14478.0 62 11797.0 63 9116.0 64 6892.0 65 4668.0 66 3741.0 67 2814.0 68 2024.0 69 1234.0 70 978.0 71 722.0 72 527.5 73 333.0 74 261.0 75 134.5 76 80.0 77 58.0 78 36.0 79 31.0 80 26.0 81 16.0 82 6.0 83 7.5 84 9.0 85 5.5 86 2.0 87 2.5 88 3.0 89 2.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1303519.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.455084307497934 #Duplication Level Percentage of deduplicated Percentage of total 1 72.97904908274052 30.983316814887786 2 12.731957935440224 10.81072695097264 3 4.75611317066333 6.057635569095387 4 2.309648921869798 3.9222535879481586 5 1.3569839065606426 2.880543307847499 6 0.9411717530722544 2.3974515674710912 7 0.6682284657233916 1.9858787094269605 8 0.5140820293652427 1.7460316718136808 9 0.42684953166667056 1.630973956817206 >10 3.135519058417704 25.155285772676134 >50 0.11488404655356843 3.355269069353059 >100 0.05838284191433155 4.447087542222257 >500 0.003660969303658379 1.0301522074447849 >1k 0.0030829215188702143 2.616895824359459 >5k 3.853651898587768E-4 0.9804974476640348 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6973 0.5349365832028532 No Hit CTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGCT 5013 0.3845743713747172 No Hit CCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC 3935 0.3018751548692424 No Hit TCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC 3812 0.2924391589228849 No Hit GCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC 3202 0.24564275626208745 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2603 0.19969022315746834 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGC 2345 0.179897646294377 No Hit CGCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTG 1942 0.14898133437257147 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCG 1918 0.1471401644318188 No Hit GAATCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTC 1833 0.14061935422498636 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCC 1663 0.1275777338113215 No Hit TCCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTG 1437 0.11024005020256705 No Hit CTGTCACTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGCT 1415 0.10855231109021042 No Hit TCTGTATCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC 1392 0.10678785656365578 No Hit TTCCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 1330 0.102031500883378 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5343082839605713E-4 0.0 0.0 0.40290935536804606 0.0 2 1.5343082839605713E-4 0.0 0.0 1.3119102982004864 0.0 3 1.5343082839605713E-4 0.0 0.0 1.8983229243302169 0.0 4 2.301462425940857E-4 0.0 0.0 2.688645121398307 0.0 5 2.301462425940857E-4 0.0 0.0 4.129974323350868 0.0 6 2.301462425940857E-4 0.0 0.0 5.101344897926306 0.0 7 2.301462425940857E-4 0.0 0.0 6.222003668531107 0.0 8 2.301462425940857E-4 0.0 0.0 7.959607800116454 0.0 9 2.301462425940857E-4 0.0 0.0 8.685719195500795 0.0 10 2.301462425940857E-4 0.0 0.0 10.331648407119497 0.0 11 2.301462425940857E-4 0.0 0.0 13.544720099975528 0.0 12 2.301462425940857E-4 0.0 0.0 16.44954925858388 0.0 13 2.301462425940857E-4 0.0 0.0 17.41524289250866 0.0 14 2.301462425940857E-4 0.0 0.0 17.737294201311986 0.0 15 2.301462425940857E-4 0.0 0.0 18.128926390792923 0.0 16 2.301462425940857E-4 0.0 0.0 19.070071092174338 0.0 17 2.301462425940857E-4 0.0 0.0 20.583819645129836 0.0 18 2.301462425940857E-4 0.0 0.0 22.17489733559695 0.0 19 2.301462425940857E-4 0.0 0.0 23.37426612116893 0.0 20 3.0686165679211425E-4 0.0 0.0 24.51909024724611 0.0 21 3.0686165679211425E-4 0.0 0.0 26.286536674954487 0.0 22 3.0686165679211425E-4 0.0 0.0 28.226209207537444 0.0 23 3.0686165679211425E-4 0.0 0.0 30.209225949142283 0.0 24 3.0686165679211425E-4 0.0 0.0 31.563636586808478 0.0 25 3.0686165679211425E-4 0.0 0.0 32.73254935294384 0.0 26 3.0686165679211425E-4 0.0 0.0 33.7419707729615 0.0 27 3.0686165679211425E-4 0.0 0.0 34.73505180975498 0.0 28 3.0686165679211425E-4 0.0 0.0 35.81950090485831 0.0 29 3.0686165679211425E-4 0.0 0.0 36.902645837920275 0.0 30 3.0686165679211425E-4 0.0 0.0 38.0963376828416 0.0 31 3.0686165679211425E-4 0.0 0.0 39.17779487679121 0.0 32 3.0686165679211425E-4 7.671541419802856E-5 0.0 40.172256791040255 0.0 33 3.0686165679211425E-4 7.671541419802856E-5 0.0 41.15613197812997 0.0 34 3.0686165679211425E-4 7.671541419802856E-5 0.0 42.09620266371261 0.0 35 3.0686165679211425E-4 7.671541419802856E-5 0.0 43.113372340564275 0.0 36 3.0686165679211425E-4 7.671541419802856E-5 0.0 44.1046889228312 0.0 37 3.0686165679211425E-4 7.671541419802856E-5 0.0 45.043378730958274 0.0 38 3.0686165679211425E-4 7.671541419802856E-5 0.0 45.97999722290201 0.0 39 3.0686165679211425E-4 7.671541419802856E-5 0.0 46.99287083655858 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGT 20 7.0336345E-4 45.000004 40 CGCATCG 20 7.0336345E-4 45.000004 21 ACCTACG 20 7.0336345E-4 45.000004 19 CGCTCCG 20 7.0336345E-4 45.000004 12 TACGAAG 20 7.0336345E-4 45.000004 25 CCGACAA 20 7.0336345E-4 45.000004 16 CCGGTTG 20 7.0336345E-4 45.000004 1 TCGACGG 20 7.0336345E-4 45.000004 2 CCGCATC 20 7.0336345E-4 45.000004 20 CGACGTA 25 3.891094E-5 45.0 28 CAACGGT 35 1.2121018E-7 45.0 21 GCACCGT 25 3.891094E-5 45.0 9 ATCGTAG 25 3.891094E-5 45.0 1 GACGGTT 50 2.1827873E-11 45.0 9 CGAATAA 25 3.891094E-5 45.0 13 TTCGCAG 100 0.0 45.0 1 GCCGTTG 50 2.1827873E-11 45.0 1 AGTGCGA 30 2.165727E-6 44.999996 25 CGTTTAT 1645 0.0 44.179333 1 CGTTTTT 4020 0.0 43.768658 1 >>END_MODULE