##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934238.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 586064 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.302439665292525 33.0 31.0 34.0 31.0 34.0 2 32.476756804717574 34.0 31.0 34.0 31.0 34.0 3 32.530872054929155 34.0 31.0 34.0 31.0 34.0 4 36.0187914630484 37.0 35.0 37.0 35.0 37.0 5 35.12520816839117 37.0 35.0 37.0 35.0 37.0 6 25.936680976821645 36.0 0.0 37.0 0.0 37.0 7 31.006067596712988 37.0 19.0 37.0 17.0 37.0 8 34.70519772584564 37.0 32.0 37.0 32.0 37.0 9 37.22111236998007 39.0 37.0 39.0 34.0 39.0 10 37.333106964427095 39.0 37.0 39.0 34.0 39.0 11 37.40412480548199 39.0 37.0 39.0 35.0 39.0 12 36.98717034317071 39.0 35.0 39.0 34.0 39.0 13 36.895675216358626 39.0 35.0 39.0 33.0 39.0 14 37.742309713614894 40.0 36.0 41.0 33.0 41.0 15 37.978831663436075 40.0 37.0 41.0 33.0 41.0 16 38.14525546697971 40.0 37.0 41.0 33.0 41.0 17 38.191296513691334 40.0 37.0 41.0 34.0 41.0 18 38.172588659259056 40.0 36.0 41.0 34.0 41.0 19 38.19232711785744 40.0 37.0 41.0 34.0 41.0 20 38.10512162494199 40.0 36.0 41.0 34.0 41.0 21 37.9888561658795 40.0 36.0 41.0 34.0 41.0 22 38.03657791640504 40.0 36.0 41.0 34.0 41.0 23 38.01540446094624 40.0 36.0 41.0 34.0 41.0 24 37.96576653744301 40.0 36.0 41.0 34.0 41.0 25 37.85086611701111 40.0 35.0 41.0 34.0 41.0 26 37.826626443528355 40.0 35.0 41.0 34.0 41.0 27 37.79022086325043 40.0 35.0 41.0 34.0 41.0 28 37.74898645881679 40.0 35.0 41.0 34.0 41.0 29 37.73324926970433 40.0 35.0 41.0 34.0 41.0 30 37.49849675120806 40.0 35.0 41.0 33.0 41.0 31 37.46992990526632 40.0 35.0 41.0 33.0 41.0 32 37.4235254170193 39.0 35.0 41.0 33.0 41.0 33 37.37477135602938 39.0 35.0 41.0 33.0 41.0 34 37.27844057986841 40.0 35.0 41.0 33.0 41.0 35 37.22814914412078 40.0 35.0 41.0 32.0 41.0 36 37.17035682109804 39.0 35.0 41.0 32.0 41.0 37 37.12247638483169 39.0 35.0 41.0 32.0 41.0 38 37.04593866881433 39.0 35.0 41.0 32.0 41.0 39 37.00230009009255 39.0 35.0 41.0 32.0 41.0 40 36.907733626361626 39.0 35.0 41.0 32.0 41.0 41 36.79246293920118 39.0 35.0 41.0 31.0 41.0 42 36.774599702421575 39.0 35.0 41.0 31.0 41.0 43 36.7227623604248 39.0 35.0 41.0 31.0 41.0 44 36.596279587212315 39.0 35.0 41.0 31.0 41.0 45 36.52200442272516 39.0 35.0 41.0 31.0 41.0 46 36.46624259466543 38.0 35.0 40.0 31.0 41.0 47 36.36880101831882 38.0 35.0 40.0 31.0 41.0 48 36.370058560157254 38.0 35.0 40.0 31.0 41.0 49 36.36663572579104 38.0 35.0 40.0 31.0 41.0 50 36.275874307242894 38.0 35.0 40.0 31.0 41.0 51 35.30998662262142 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 17.0 11 2.0 12 8.0 13 11.0 14 5.0 15 16.0 16 38.0 17 60.0 18 124.0 19 182.0 20 329.0 21 580.0 22 824.0 23 1284.0 24 1968.0 25 2890.0 26 3837.0 27 4821.0 28 5765.0 29 7083.0 30 8916.0 31 11993.0 32 17367.0 33 29732.0 34 43551.0 35 51010.0 36 52776.0 37 88786.0 38 121455.0 39 130556.0 40 71.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.360943514701468 4.835990608534221 52.59084332086598 16.212222555898332 2 21.466426874880558 4.575097600262088 50.567344180840315 23.391131344017037 3 21.73295066750389 4.78667858800404 50.53594829233668 22.944422452155397 4 19.492581015042727 4.976589587485326 49.66454175653171 25.86628764094024 5 17.350494143984275 8.456414316525157 48.8994376040842 25.293653935406375 6 16.0926110458926 31.545530863523435 38.6329820633924 13.72887602719157 7 82.30056785607033 2.7321248191323813 9.833397035136095 5.1339102896611974 8 83.25012285347675 2.714038057277021 8.62158399082694 5.414255098419285 9 77.96725272325207 4.959355974774086 10.910071255016517 6.163320046957329 10 41.51201916514237 25.68286057495427 17.88456550820388 14.920554751699472 11 33.71082339130197 22.38253842583745 24.888749351606652 19.017888831253924 12 30.675318736520246 21.68159108902782 29.264210052144474 18.37888012230746 13 26.6720016926479 23.918206885254854 30.570893281279858 18.838898140817385 14 19.8568756995823 26.30941330639657 33.36512735810423 20.468583635916897 15 17.90452919817631 22.91746293920118 37.71857681072374 21.45943105189877 16 23.527123317589886 24.464392967320975 31.107353463103003 20.90113025198613 17 24.0251917879276 22.883507603265173 28.84309563460646 24.24820497420077 18 26.100050506429334 21.348692292991892 31.42028856916651 21.13096863141227 19 25.49840972999536 24.536910644571243 28.504224794561683 21.460454830871715 20 25.86424008299435 28.05273826749297 27.637425264134976 18.445596385377705 21 24.587587703732016 26.485332659914274 30.641363400584236 18.285716235769474 22 22.896646100084634 23.40153976357531 31.635623413142593 22.066190723197465 23 21.17123727101477 24.80411695650987 31.18959704059625 22.835048731879112 24 22.415640612629335 24.58451636681318 30.589662562450513 22.410180458106964 25 22.214297414616833 25.31993092904529 27.197712195255125 25.26805946108275 26 20.58904829506675 25.015356684594174 27.827506893445086 26.56808812689399 27 19.452483005269052 24.455349586393297 33.31513281825876 22.777034590078898 28 16.413224494253186 24.886189904174287 32.24801386879248 26.45257173278004 29 18.748976221027057 24.94130333888449 31.392987796554646 24.916732643533813 30 22.484575063474296 21.980875808785388 33.87531054628846 21.659238581451856 31 23.182792323022742 23.58138360315597 31.54689590215403 21.688928171667257 32 25.270107019028636 23.74075186327773 28.2182492014524 22.77089191624123 33 22.994416992000875 23.16385241202326 29.09682219006798 24.744908405907886 34 19.84970924677168 22.339027819487292 33.134947719020445 24.676315214720574 35 19.40743673045947 24.65959349149581 29.697097927871358 26.23587185017336 36 21.700360370198478 24.67887466215294 29.907655136640365 23.713109831008218 37 19.568170029211824 26.43994512544705 31.168097682164404 22.823787163176718 38 21.090188102323296 25.812368615031804 28.85145649621884 24.245986786426055 39 20.06726227852248 22.888967757787544 30.491891670534276 26.551878293155696 40 24.44852439324033 21.22464440743673 31.075275055284063 23.251556144038876 41 20.561235632968415 21.855974774086107 28.750443637554945 28.832345955390537 42 21.90904065085042 21.425134456305113 29.552403833028475 27.113421059815995 43 21.648659532064755 20.568743345436676 30.895601845532227 26.886995276966335 44 20.915292527778536 21.45038767097109 29.934614649594582 27.69970515165579 45 20.716508777198396 21.08250976002621 29.096310300581507 29.104671162193892 46 21.157074995222363 20.88014278304076 31.521983947145703 26.44079827459117 47 17.90913620355456 23.58053045401185 33.744608097409156 24.765725245024434 48 18.826612793142044 23.360247344999863 32.34237216413224 25.470767697725844 49 22.350289388189687 19.25062791777007 33.24227388135084 25.156808812689402 50 19.507596439979253 22.199452619509135 31.184136886073876 27.10881405443774 51 18.528522482186247 21.7365338939092 28.665128723142864 31.069814900761695 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 78.0 1 334.5 2 591.0 3 2057.0 4 3523.0 5 2275.0 6 1027.0 7 1066.0 8 1105.0 9 1229.5 10 1354.0 11 1301.5 12 1249.0 13 1203.5 14 1158.0 15 1144.5 16 1131.0 17 1188.5 18 1246.0 19 1315.0 20 1384.0 21 1470.5 22 1557.0 23 1966.0 24 2375.0 25 3026.5 26 4205.5 27 4733.0 28 5116.0 29 5499.0 30 6735.5 31 7972.0 32 9297.0 33 10622.0 34 12026.0 35 13430.0 36 14859.5 37 16289.0 38 18104.5 39 19920.0 40 23719.5 41 27519.0 42 31070.5 43 34622.0 44 37995.5 45 41369.0 46 47138.0 47 52907.0 48 59835.5 49 66764.0 50 64666.0 51 62568.0 52 54794.5 53 47021.0 54 42918.0 55 38815.0 56 34523.0 57 30231.0 58 27363.5 59 24496.0 60 21640.5 61 18785.0 62 16212.0 63 13639.0 64 11476.5 65 9314.0 66 7971.5 67 6629.0 68 5623.5 69 4618.0 70 3742.0 71 2866.0 72 2349.5 73 1833.0 74 1442.0 75 793.0 76 535.0 77 439.0 78 343.0 79 215.5 80 88.0 81 53.0 82 18.0 83 42.5 84 67.0 85 48.5 86 30.0 87 19.5 88 9.0 89 5.5 90 2.0 91 3.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 586064.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.59949864555824 #Duplication Level Percentage of deduplicated Percentage of total 1 70.28450479066292 23.615241235176107 2 11.689308064625225 7.855097809697767 3 4.4506983188022495 4.486236964031536 4 2.3385793773510857 3.1430037848735304 5 1.4770547398677762 2.4814149365801375 6 1.1160745933721463 2.249972807300964 7 0.8691159193197464 2.0441301407811854 8 0.7389098339027802 1.9861599970724908 9 0.6640831789077303 2.0081575683223467 >10 6.181307768519197 42.08773480719149 >50 0.14303549389508455 3.176678366269979 >100 0.04154339712391963 2.613042792076787 >500 0.003155194718272377 0.6449121773669803 >1k 0.0026293289318936475 1.6082166132587 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTCTGCT 2123 0.3622471265936826 TruSeq Adapter, Index 27 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTCTGC 2114 0.3607114581342652 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTCTGC 1730 0.2951896038657894 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTCTGC 1587 0.27078953834393515 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1548 0.26413497501979305 No Hit GCTGTATCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTCTGC 680 0.1160282836004259 TruSeq Adapter, Index 27 (95% over 23bp) TCCTGTCTCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTCTG 627 0.10698490267274563 TruSeq Adapter, Index 27 (95% over 22bp) TCTGTATCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTCTGC 593 0.10118348849272435 TruSeq Adapter, Index 27 (95% over 23bp) CCTGTATCTTATACACATCTGACGCCTTCTTGCTCGTATGCCGTCTTCTGC 591 0.10084222883507603 TruSeq Adapter, Index 27 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.382381446394933 0.0 2 0.0 0.0 0.0 1.3786890168991783 0.0 3 0.0 0.0 0.0 1.9477394960277377 0.0 4 0.0 0.0 0.0 2.52634524557045 0.0 5 0.0 0.0 0.0 3.485284883562205 0.0 6 0.0 0.0 0.0 4.096480930410331 0.0 7 0.0 0.0 0.0 4.877965546424964 0.0 8 0.0 0.0 0.0 6.077493243058779 0.0 9 0.0 0.0 0.0 6.625385623413143 0.0 10 0.0 0.0 0.0 7.67885418657348 0.0 11 0.0 0.0 0.0 9.846876791613203 0.0 12 0.0 0.0 0.0 11.608288514564963 0.0 13 0.0 0.0 0.0 12.20020339075596 0.0 14 0.0 0.0 0.0 12.423557836686777 0.0 15 0.0 0.0 0.0 12.767035682109803 0.0 16 0.0 0.0 0.0 13.536576210106746 0.0 17 0.0 0.0 0.0 14.569569193808185 0.0 18 0.0 0.0 0.0 15.720467389227116 0.0 19 0.0 0.0 0.0 16.477551939719895 0.0 20 0.0 0.0 0.0 17.32967730486773 0.0 21 0.0 0.0 0.0 18.494737776079063 0.0 22 0.0 0.0 0.0 19.61679953042671 0.0 23 0.0 0.0 0.0 20.621126702885693 0.0 24 0.0 0.0 0.0 21.39698053454913 0.0 25 0.0 0.0 0.0 22.10492369434055 0.0 26 0.0 0.0 0.0 22.776522700592427 0.0 27 0.0 0.0 0.0 23.476787518086763 0.0 28 0.0 0.0 0.0 24.135930546834476 0.0 29 0.0 0.0 0.0 24.884824865543695 0.0 30 0.0 0.0 0.0 25.809467907941794 0.0 31 0.0 0.0 0.0 26.4650277102842 0.0 32 0.0 0.0 0.0 27.136114827049607 0.0 33 0.0 0.0 0.0 27.777853613257257 0.0 34 0.0 0.0 0.0 28.485455513391027 0.0 35 0.0 0.0 0.0 29.28451500177455 0.0 36 1.7062982882415573E-4 0.0 0.0 29.931713942504572 0.0 37 1.7062982882415573E-4 0.0 0.0 30.636415135548337 0.0 38 1.7062982882415573E-4 0.0 0.0 31.43274454667067 0.0 39 1.7062982882415573E-4 0.0 0.0 32.763315951841435 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACAA 20 7.030454E-4 45.0 17 TCCGCAC 20 7.030454E-4 45.0 31 TTAATCG 25 3.888458E-5 45.0 20 ACGTTAC 20 7.030454E-4 45.0 12 CGTGCGA 20 7.030454E-4 45.0 31 CCCTACT 20 7.030454E-4 45.0 23 ATAGCGT 20 7.030454E-4 45.0 17 CGTTACG 20 7.030454E-4 45.0 13 GCCGATT 55 1.8189894E-12 45.0 9 AATTGCG 20 7.030454E-4 45.0 1 GTCGTTG 20 7.030454E-4 45.0 1 TTGCACG 20 7.030454E-4 45.0 2 TGTGTCG 40 6.8048394E-9 45.0 1 CGATAGC 20 7.030454E-4 45.0 15 ACCTTCG 20 7.030454E-4 45.0 23 GTAGTAC 40 6.8048394E-9 45.0 9 ACGGTGC 20 7.030454E-4 45.0 41 ACGAACA 30 2.1636752E-6 44.999996 25 CGTTAGG 145 0.0 43.448273 2 CTAGGGA 655 0.0 42.938927 4 >>END_MODULE