##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934237.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1378975 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.41510614768215 33.0 31.0 34.0 31.0 34.0 2 32.58058848057434 34.0 31.0 34.0 31.0 34.0 3 32.650209032070926 34.0 31.0 34.0 31.0 34.0 4 36.08931779038779 37.0 35.0 37.0 35.0 37.0 5 35.16979785710401 37.0 35.0 37.0 35.0 37.0 6 25.923911601007994 37.0 0.0 37.0 0.0 37.0 7 31.04138291122029 37.0 19.0 37.0 17.0 37.0 8 34.81730923330735 37.0 32.0 37.0 32.0 37.0 9 37.39575844377164 39.0 37.0 39.0 35.0 39.0 10 37.36081074711289 39.0 37.0 39.0 34.0 39.0 11 37.44997407494697 39.0 37.0 39.0 35.0 39.0 12 37.101875668521906 39.0 37.0 39.0 34.0 39.0 13 37.04865715477075 39.0 37.0 39.0 33.0 39.0 14 37.917061585598 40.0 37.0 41.0 33.0 41.0 15 38.144272376221465 40.0 37.0 41.0 33.0 41.0 16 38.31887162566399 40.0 37.0 41.0 33.0 41.0 17 38.36206385177396 40.0 37.0 41.0 34.0 41.0 18 38.36321688210446 40.0 37.0 41.0 34.0 41.0 19 38.37836073895466 40.0 37.0 41.0 34.0 41.0 20 38.27700429666963 40.0 37.0 41.0 34.0 41.0 21 38.18656320817999 40.0 37.0 41.0 34.0 41.0 22 38.24300585579869 40.0 37.0 41.0 34.0 41.0 23 38.19954313892565 40.0 36.0 41.0 34.0 41.0 24 38.145629181094655 40.0 36.0 41.0 34.0 41.0 25 38.04363240812923 40.0 36.0 41.0 34.0 41.0 26 38.013311336318644 40.0 36.0 41.0 34.0 41.0 27 38.00054170670244 40.0 36.0 41.0 34.0 41.0 28 37.94056890081401 40.0 36.0 41.0 34.0 41.0 29 37.93182690041516 40.0 36.0 41.0 34.0 41.0 30 37.69347812686959 40.0 36.0 41.0 33.0 41.0 31 37.67178012654327 40.0 36.0 41.0 33.0 41.0 32 37.645356152214504 40.0 36.0 41.0 33.0 41.0 33 37.595825159992025 40.0 36.0 41.0 33.0 41.0 34 37.50294530357693 40.0 36.0 41.0 33.0 41.0 35 37.48606392429159 40.0 35.0 41.0 33.0 41.0 36 37.42899472434235 40.0 35.0 41.0 33.0 41.0 37 37.342141808227126 40.0 35.0 41.0 32.0 41.0 38 37.28283471418989 40.0 35.0 41.0 32.0 41.0 39 37.25345999746188 40.0 35.0 41.0 32.0 41.0 40 37.15120578690694 40.0 35.0 41.0 32.0 41.0 41 37.016027121593936 39.0 35.0 41.0 32.0 41.0 42 37.02350006345293 39.0 35.0 41.0 32.0 41.0 43 37.01031128193042 39.0 35.0 41.0 32.0 41.0 44 36.92491814572418 39.0 35.0 41.0 32.0 41.0 45 36.89779800213927 39.0 35.0 41.0 32.0 41.0 46 36.849771025580594 39.0 35.0 41.0 32.0 41.0 47 36.7697804528726 39.0 35.0 41.0 32.0 41.0 48 36.730684022552985 39.0 35.0 41.0 31.0 41.0 49 36.718696858173644 39.0 35.0 41.0 31.0 41.0 50 36.625733606483074 39.0 35.0 41.0 31.0 41.0 51 35.649382331079245 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 7.0 10 8.0 11 14.0 12 7.0 13 13.0 14 22.0 15 37.0 16 80.0 17 162.0 18 252.0 19 496.0 20 829.0 21 1399.0 22 2195.0 23 3201.0 24 4823.0 25 6851.0 26 8765.0 27 10111.0 28 11842.0 29 14619.0 30 19172.0 31 26208.0 32 38452.0 33 63721.0 34 93103.0 35 100962.0 36 115847.0 37 204435.0 38 302747.0 39 348370.0 40 220.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.756793995540168 4.220671150673508 55.834224695879186 15.188310157907143 2 19.84764045758625 4.297612357004297 54.58133758770101 21.273409597708444 3 21.683714353052085 4.1716492322195835 52.69609673851955 21.448539676208778 4 19.24146558131946 4.558603310429849 52.0504722710709 24.14945883717979 5 17.94869377617433 7.964756431407386 51.03515292155405 23.05139687086423 6 16.150546601642525 31.52051342482641 39.28838448847876 13.040555485052302 7 85.84136768251781 1.6875577874870828 8.31472651788466 4.156348012110445 8 89.1211950905564 1.8800195797603292 5.625265142587792 3.3735201870954876 9 85.05708950488588 3.542051161188564 7.524864482677351 3.875994851248209 10 40.89392483547562 23.21528671658297 19.27395347993981 16.616834968001594 11 33.74158342246959 26.287278594608317 22.195616309215175 17.77552167370692 12 29.809097336790007 22.669809097336792 27.672655414347613 19.848438151525592 13 28.060987327544005 22.12077811417901 29.123950760528654 20.694283797748326 14 22.53260573977048 23.375913268913504 32.738011929150275 21.35346906216574 15 22.925578781341212 23.231240595369748 33.20372015446255 20.639460468826485 16 26.21425334034337 23.62653420112765 29.10045504813358 21.0587574103954 17 26.959009409162604 23.682155223988833 27.60978262840153 21.749052738447038 18 27.13986838050001 23.1405935568085 29.02336880654109 20.6961692561504 19 26.83725230696713 25.349553110099894 27.370111858445583 20.44308272448739 20 25.70365670153556 29.178991642343043 27.293823310792437 17.82352834532896 21 24.92032125310466 26.276908573396906 30.36726554143476 18.43550463206367 22 23.256476730905202 22.960822349933828 31.79274461103356 21.989956308127415 23 21.910839572871154 25.52896172882032 30.667125944995377 21.89307275331315 24 22.073279065972915 27.41478271904857 29.033593792490798 21.478344422487716 25 23.94437897713882 26.25689370728258 26.62281767254664 23.17590964303196 26 21.121775231603184 26.26726372849399 27.14102866259359 25.469932377309235 27 20.628582824199132 25.473413223589986 30.919632335611595 22.978371616599286 28 18.45073333454196 25.799960115303033 30.212802987726388 25.536503562428614 29 20.610163345963485 26.318968799289326 29.611051686941387 23.459816167805798 30 24.348012110444355 24.25453688427999 29.911709784441342 21.485741220834313 31 23.158287858735655 25.77617433238456 29.768777534037966 21.296760274841823 32 24.447071194184087 25.799815080041334 27.598034772203995 22.155078953570587 33 24.729962472126036 24.806105984517483 27.55329139397016 22.910640149386317 34 20.835910730796424 24.475643140738594 31.016878478580107 23.671567649884878 35 20.330607879040592 27.008974056817564 28.212694211280116 24.447723852861728 36 23.37344766946464 25.97342228829384 27.4522743341975 23.200855708044017 37 20.71444369912435 27.05081672981744 30.09104588553092 22.143693685527293 38 22.32875867945394 25.973132217770445 29.163545386972206 22.534563715803404 39 22.435504632063672 24.158596058666763 28.052865352888922 25.353033956380642 40 25.62845591834515 23.539005420692906 28.07563588897551 22.75690277198644 41 21.54549574865389 24.761145053391107 26.881850649939267 26.811508548015738 42 20.0543157055059 24.87753585090375 29.788937435413988 25.27921100817636 43 20.57281676607625 23.241610616581156 30.661832157943397 25.523740459399193 44 22.314617741438386 23.895212023423195 29.112202904331113 24.677967330807302 45 21.735999564894215 22.644355408908794 27.508693050998023 28.110951975198972 46 21.462680614224332 23.31927699922044 29.384289055276565 25.83375333127867 47 18.938051813847242 25.025979441251657 31.976866875759168 24.059101869141937 48 20.24083105204953 26.485034173933535 30.288656429594447 22.98547834442249 49 23.267354375532552 22.71179680559836 30.36596022407948 23.654888594789607 50 21.725919614206205 24.033285592559693 28.17861092478109 26.062183868453015 51 20.419514494461467 24.74577131565112 26.848855127902972 27.985859061984446 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 205.0 1 807.0 2 1409.0 3 2761.0 4 4113.0 5 2944.0 6 1775.0 7 1823.0 8 1871.0 9 1966.0 10 2061.0 11 2172.5 12 2284.0 13 2256.5 14 2229.0 15 2188.5 16 2148.0 17 2147.0 18 2146.0 19 2300.5 20 2455.0 21 2832.5 22 3210.0 23 3775.5 24 4341.0 25 5333.0 26 7316.5 27 8308.0 28 10037.0 29 11766.0 30 15156.5 31 18547.0 32 21296.5 33 24046.0 34 29391.5 35 34737.0 36 38436.0 37 42135.0 38 47752.0 39 53369.0 40 59206.0 41 65043.0 42 73574.5 43 82106.0 44 90567.5 45 99029.0 46 111767.5 47 124506.0 48 139305.5 49 154105.0 50 152035.0 51 149965.0 52 135130.0 53 120295.0 54 109312.0 55 98329.0 56 88639.0 57 78949.0 58 69641.0 59 60333.0 60 50632.5 61 40932.0 62 34535.0 63 28138.0 64 23393.0 65 18648.0 66 15079.5 67 11511.0 68 9396.0 69 7281.0 70 5734.5 71 4188.0 72 3426.0 73 2664.0 74 2247.5 75 1405.5 76 980.0 77 669.0 78 358.0 79 263.0 80 168.0 81 124.0 82 80.0 83 56.5 84 33.0 85 25.5 86 18.0 87 11.0 88 4.0 89 2.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1378975.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.05980892118213 #Duplication Level Percentage of deduplicated Percentage of total 1 70.29672618781218 21.834028831781065 2 11.320634388235783 7.03233481930334 3 4.101444670244704 3.8217026327580417 4 2.2057086173560725 2.740355527635378 5 1.4119289154400008 2.1927121161929177 6 1.0435124663649196 1.9446778687299542 7 0.8565353540266449 1.8622677101213279 8 0.7130413399152626 1.7717542216537387 9 0.6260296771411613 1.7499925935894434 >10 7.184801481392624 46.936573555923026 >50 0.17985975607515073 3.5899534779208144 >100 0.05487738012424455 2.866495558335812 >500 0.00342983610991827 0.7199909806342957 >1k 0.0014699297613935446 0.9371601054208397 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCCGTCTTCTGCT 2857 0.20718287133559346 TruSeq Adapter, Index 21 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCCGTCTTCTGC 2550 0.1849199586649504 TruSeq Adapter, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCCGTCTTCTGC 2111 0.15308471872223936 TruSeq Adapter, Index 14 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCCGTCTTCTGC 2102 0.15243206004459836 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1605 0.11639079751264528 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4503526169800033E-4 0.0 0.0 0.2182780688554905 0.0 2 1.4503526169800033E-4 0.0 0.0 0.7497597853478127 0.0 3 1.4503526169800033E-4 0.0 0.0 1.0556391522688953 0.0 4 1.4503526169800033E-4 0.0 0.0 1.3953117351656121 0.0 5 1.4503526169800033E-4 0.0 0.0 1.9824869921499664 0.0 6 1.4503526169800033E-4 0.0 0.0 2.3982305698072843 0.0 7 1.4503526169800033E-4 0.0 0.0 2.9534980692180786 0.0 8 1.4503526169800033E-4 0.0 0.0 3.8513388567595497 0.0 9 1.4503526169800033E-4 0.0 0.0 4.243006580975 0.0 10 1.4503526169800033E-4 0.0 0.0 5.087836980365852 0.0 11 1.4503526169800033E-4 0.0 0.0 6.632680070342102 0.0 12 1.4503526169800033E-4 0.0 0.0 7.930455592015809 0.0 13 1.4503526169800033E-4 0.0 0.0 8.36773690603528 0.0 14 2.1755289254700048E-4 0.0 0.0 8.532859551478452 0.0 15 2.1755289254700048E-4 0.0 0.0 8.749107126670172 0.0 16 2.1755289254700048E-4 0.0 0.0 9.283634583658152 0.0 17 2.1755289254700048E-4 0.0 0.0 10.02142895991588 0.0 18 2.9007052339600066E-4 0.0 0.0 10.82789753258761 0.0 19 2.9007052339600066E-4 0.0 0.0 11.416668177450642 0.0 20 2.9007052339600066E-4 0.0 0.0 12.072662666110698 0.0 21 2.9007052339600066E-4 0.0 0.0 13.008430174586197 0.0 22 3.6258815424500084E-4 0.0 0.0 14.03890570895049 0.0 23 4.3510578509400096E-4 0.0 0.0 14.982070015772585 0.0 24 4.3510578509400096E-4 0.0 0.0 15.71935676861437 0.0 25 4.3510578509400096E-4 0.0 0.0 16.3773817509382 0.0 26 4.3510578509400096E-4 0.0 0.0 16.963396725828968 0.0 27 5.801410467920013E-4 0.0 0.0 17.63541761090665 0.0 28 5.801410467920013E-4 0.0 0.0 18.24703130948712 0.0 29 5.801410467920013E-4 0.0 0.0 18.987726390978807 0.0 30 5.801410467920013E-4 0.0 0.0 19.817618158414763 0.0 31 6.526586776410014E-4 0.0 0.0 20.459544226690113 0.0 32 6.526586776410014E-4 0.0 0.0 21.075944088906617 0.0 33 6.526586776410014E-4 0.0 0.0 21.69662249134321 0.0 34 6.526586776410014E-4 0.0 0.0 22.377055421599376 0.0 35 6.526586776410014E-4 0.0 0.0 23.12826555956417 0.0 36 7.251763084900017E-4 0.0 0.0 23.75264236117406 0.0 37 7.251763084900017E-4 0.0 0.0 24.43002955093457 0.0 38 7.251763084900017E-4 0.0 0.0 25.26492503489911 0.0 39 7.251763084900017E-4 0.0 0.0 26.81651226454432 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGCAC 20 7.0337765E-4 45.000004 33 GCGATAT 45 3.8562575E-10 45.0 9 TCGATAG 25 3.8912138E-5 44.999996 1 CCGTTAG 60 0.0 44.999996 1 CGTTAGG 370 0.0 43.175674 2 TAGGGCG 730 0.0 42.53425 5 CTCGTAG 125 0.0 41.4 1 TAGGGCA 1290 0.0 41.162792 5 GACACGA 455 0.0 41.043957 25 TCGTTAG 220 0.0 40.909092 1 CTAGGGA 1615 0.0 40.681114 4 TAGGGAG 1605 0.0 40.51402 5 CGTAAGG 50 1.0822987E-9 40.499996 2 TTTAGGG 5730 0.0 40.48429 3 TTAGGGA 2950 0.0 40.42373 4 AGACACG 475 0.0 40.263157 24 CACGACC 465 0.0 40.161293 27 AGGGCGA 835 0.0 40.1497 6 TGTAGGG 2130 0.0 39.823944 3 CTTAGGG 2590 0.0 39.6139 3 >>END_MODULE