SRR2934236.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934236.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	604704
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC	2439	0.4033378314018098	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2319	0.3834934116526433	No Hit
GCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC	2269	0.3752249034238239	No Hit
CTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGCT	2268	0.3750595332592475	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGC	2264	0.37439805260094194	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCG	1963	0.3246216330634492	No Hit
TCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC	1917	0.3170146054929354	No Hit
GAATCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTC	1419	0.23466026353389427	No Hit
GCTGTATCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC	874	0.14453352383976292	No Hit
CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	841	0.13907630840874213	No Hit
TCCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTG	726	0.12005873948245753	No Hit
TCTGTATCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC	699	0.11559374503889507	No Hit
CCTGTATCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC	676	0.11179023125363814	No Hit
CTGTCACTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGCT	661	0.10930967878499233	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCTAGG	85	0.0	45.000004	2
ACGGATC	30	2.163788E-6	45.000004	14
CGGGTAT	40	6.8066583E-9	45.0	6
GACGTAT	20	7.0306315E-4	45.0	16
CCGTAGG	20	7.0306315E-4	45.0	2
CGATGCG	20	7.0306315E-4	45.0	10
GGCGATA	20	7.0306315E-4	45.0	8
ATCGGAC	20	7.0306315E-4	45.0	42
CGGACTT	20	7.0306315E-4	45.0	15
CGGACTC	20	7.0306315E-4	45.0	44
TTTACGC	25	3.8886064E-5	44.999996	23
CGTTAGG	200	0.0	44.999996	2
CCCGTTA	25	3.8886064E-5	44.999996	43
ATCGGCA	25	3.8886064E-5	44.999996	24
ACTCAAC	25	3.8886064E-5	44.999996	29
TAGGGCG	255	0.0	43.235294	5
ACATACG	115	0.0	43.043476	17
TCGTTAG	95	0.0	42.63158	1
TTTGTCG	95	0.0	42.63158	1
GCGTTAG	75	0.0	42.0	1