##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934235.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 137139 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.26004273036846 33.0 31.0 34.0 30.0 34.0 2 32.44197493054492 34.0 31.0 34.0 31.0 34.0 3 32.51414987713196 34.0 31.0 34.0 31.0 34.0 4 35.99421754570181 37.0 35.0 37.0 35.0 37.0 5 35.10277164045239 37.0 35.0 37.0 35.0 37.0 6 26.113417773208205 36.0 0.0 37.0 0.0 37.0 7 31.035854133397503 37.0 19.0 37.0 17.0 37.0 8 34.60211901793071 37.0 32.0 37.0 32.0 37.0 9 37.058043299134454 39.0 37.0 39.0 34.0 39.0 10 37.25672492872195 39.0 37.0 39.0 34.0 39.0 11 37.33496671260546 39.0 37.0 39.0 34.0 39.0 12 37.08363776897892 39.0 37.0 39.0 34.0 39.0 13 37.04971598159531 39.0 37.0 39.0 33.0 39.0 14 37.998884343622166 40.0 37.0 41.0 33.0 41.0 15 38.166057795375494 40.0 37.0 41.0 33.0 41.0 16 38.31989441369705 40.0 37.0 41.0 34.0 41.0 17 38.329614478740545 40.0 37.0 41.0 34.0 41.0 18 38.3439284229869 40.0 37.0 41.0 34.0 41.0 19 38.34955774797833 40.0 37.0 41.0 34.0 41.0 20 38.26606581643442 40.0 37.0 41.0 34.0 41.0 21 38.17040375093883 40.0 37.0 41.0 34.0 41.0 22 38.19755868133791 40.0 37.0 41.0 34.0 41.0 23 38.163673353313065 40.0 37.0 41.0 34.0 41.0 24 38.08031267546066 40.0 37.0 41.0 34.0 41.0 25 37.94383800377719 40.0 36.0 41.0 34.0 41.0 26 37.87772989448661 40.0 36.0 41.0 34.0 41.0 27 37.800166254675915 40.0 36.0 41.0 33.0 41.0 28 37.75669940717083 40.0 36.0 41.0 33.0 41.0 29 37.70131034935358 40.0 36.0 41.0 33.0 41.0 30 37.448406361428916 40.0 36.0 41.0 33.0 41.0 31 37.48614908960981 40.0 36.0 41.0 33.0 41.0 32 37.43939360794522 39.0 35.0 41.0 33.0 41.0 33 37.36486338678275 39.0 35.0 41.0 33.0 41.0 34 37.321214242483904 39.0 35.0 41.0 32.0 41.0 35 37.31640889900029 40.0 35.0 41.0 32.0 41.0 36 37.224990702863515 39.0 35.0 41.0 32.0 41.0 37 37.13901224305267 39.0 35.0 41.0 32.0 41.0 38 37.065583094524534 39.0 35.0 41.0 32.0 41.0 39 37.01319828786851 39.0 35.0 41.0 32.0 41.0 40 36.880770605006596 39.0 35.0 41.0 31.0 41.0 41 36.76357564223161 39.0 35.0 41.0 31.0 41.0 42 36.79450047032573 39.0 35.0 41.0 31.0 41.0 43 36.72681002486528 39.0 35.0 41.0 31.0 41.0 44 36.57925170812096 39.0 35.0 40.0 31.0 41.0 45 36.55596146974967 39.0 35.0 40.0 31.0 41.0 46 36.479761409956325 38.0 35.0 40.0 31.0 41.0 47 36.39753097222526 38.0 35.0 40.0 31.0 41.0 48 36.39174851792707 38.0 35.0 40.0 31.0 41.0 49 36.39112870882827 38.0 35.0 40.0 31.0 41.0 50 36.28743829253531 38.0 35.0 40.0 31.0 41.0 51 35.26036357272548 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 6.0 12 1.0 13 2.0 14 6.0 15 7.0 16 8.0 17 15.0 18 31.0 19 53.0 20 90.0 21 174.0 22 230.0 23 342.0 24 450.0 25 636.0 26 813.0 27 962.0 28 1215.0 29 1552.0 30 2064.0 31 2758.0 32 4042.0 33 6351.0 34 9362.0 35 11248.0 36 13892.0 37 22457.0 38 29555.0 39 28800.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.99114766769482 4.811906168194314 51.92760629726044 17.269339866850423 2 21.19236686865151 5.405464528689869 49.975572229635624 23.426596373022992 3 22.1928116728283 5.245043350177557 49.487746009523185 23.07439896747096 4 20.788397173670507 4.674089792108736 48.2240646351512 26.313448399069557 5 18.754694142439423 8.35648502614136 47.47081428331838 25.41800654810083 6 16.827452438766507 31.215773776970813 38.404100948672514 13.552672835590169 7 79.18753964955265 2.695075799006847 11.872625584261225 6.244758967179285 8 78.7660694623703 3.7057292236344144 10.035073903120193 7.493127410875097 9 72.48412194926316 5.896207497502534 13.32808318567293 8.291587367561378 10 38.90359416358585 24.18057591203086 20.512764421499355 16.403065502883933 11 28.453612757858814 24.147033301978286 26.429389159903454 20.969964780259446 12 25.45592428120374 21.333099993437315 32.86811191564763 20.342863809711314 13 24.981952617417367 23.008042934540867 32.4065364338372 19.603468014204566 14 18.90928182355129 25.474883147755197 34.01731090353583 21.598524125157688 15 17.103085190937662 24.88642909748503 36.2697700872837 21.7407156242936 16 21.861031508177835 25.312274407717716 29.061754861855487 23.76493922224896 17 22.04770342499216 24.503605830580653 27.388999482277104 26.059691262150082 18 23.514098834029706 22.977417073188516 30.908785976272252 22.599698116509526 19 23.376282457944132 24.398602877372593 28.716849328054018 23.508265336629258 20 23.682541071467636 27.46921007153326 29.023107941577525 19.825140915421578 21 23.65118602294023 25.983126608769204 30.929932404348868 19.435754963941694 22 22.041869927591716 23.26763356886079 30.567526378346056 24.122970125201437 23 21.855927197952443 24.391311005622033 29.46207862096121 24.29068317546431 24 23.26034169711023 24.962993750865913 27.14763852733358 24.62902602469028 25 21.976972269011732 25.350192140820628 25.768016392127695 26.90481919803995 26 19.856495963948987 26.26094692246553 25.776037451053313 28.106519662532175 27 20.287445584407063 26.885131144313434 28.63663873879786 24.190784532481644 28 16.764742341711695 25.542697555035403 29.754482678158656 27.93807742509425 29 18.729172591312466 26.79544112178155 27.076178184178097 27.39920810272789 30 20.917463303655413 27.341602315898466 27.946827671194917 23.7941067092512 31 20.68485259481256 26.7101262223 27.952661168595366 24.652360014292068 32 21.484770925848956 25.974376362668533 24.665485383443077 27.875367328039435 33 21.522688658951868 25.733015407725006 25.74541158970096 26.998884343622166 34 18.1224888616659 23.359511152917843 30.310852492726358 28.2071474926899 35 18.70948453758595 24.809135256929103 26.017398405996833 30.46398179948811 36 22.00686894318903 25.981668234419093 26.088858749152323 25.922604073239558 37 20.10514879064307 26.392200613975604 28.972064839323608 24.53058575605772 38 19.74930544921576 27.076178184178097 27.074719809827986 26.09979655677816 39 21.127469210071535 24.510168515156156 27.4436885204063 26.918673754366008 40 23.01825155499165 24.01577961046821 27.617235068069622 25.348733766470517 41 18.608856707428227 23.828378506478828 26.181465520384428 31.381299265708513 42 20.13577465199542 23.196902412880362 26.913569444140617 29.753753490983602 43 20.98381933658551 22.73678530542005 28.217356113140685 28.06203924485376 44 21.174866376450172 22.39771326901902 28.11672828298296 28.310692071547845 45 20.722041140740416 22.303648123436805 26.442514529054463 30.531796206768313 46 20.877358009027336 23.391595388620303 29.54301839739243 26.188028204959927 47 16.885058225595927 24.267349185862518 32.416745054287986 26.430847534253566 48 17.569764982973478 24.44964597962651 30.149702127038992 27.83088691036102 49 21.271119083557558 21.49133361042446 31.57088793122307 25.666659374794914 50 20.64183055148426 21.723944319267314 28.81966471973691 28.814560409511518 51 19.037618766361135 22.18916573695302 26.697000853148996 32.07621464353685 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 34.0 1 90.5 2 147.0 3 297.0 4 447.0 5 332.0 6 217.0 7 224.0 8 231.0 9 278.0 10 325.0 11 347.5 12 370.0 13 371.5 14 373.0 15 366.5 16 360.0 17 360.0 18 360.0 19 377.5 20 395.0 21 406.0 22 417.0 23 491.0 24 565.0 25 657.5 26 863.0 27 976.0 28 1149.0 29 1322.0 30 1529.5 31 1737.0 32 2027.0 33 2317.0 34 2686.5 35 3056.0 36 3344.5 37 3633.0 38 3817.0 39 4001.0 40 4699.5 41 5398.0 42 6334.0 43 7270.0 44 8359.0 45 9448.0 46 11265.0 47 13082.0 48 15065.5 49 17049.0 50 15835.0 51 14621.0 52 12289.0 53 9957.0 54 9109.0 55 8261.0 56 7710.5 57 7160.0 58 6707.0 59 6254.0 60 5593.5 61 4933.0 62 4282.5 63 3632.0 64 3093.5 65 2555.0 66 2273.5 67 1992.0 68 1707.5 69 1423.0 70 1164.0 71 905.0 72 729.0 73 553.0 74 433.5 75 248.0 76 182.0 77 126.5 78 71.0 79 48.5 80 26.0 81 18.0 82 10.0 83 7.5 84 5.0 85 3.5 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 137139.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.73951246545476 #Duplication Level Percentage of deduplicated Percentage of total 1 73.47195805274251 41.687630797949524 2 12.217909833958771 13.864764946514121 3 5.939957847118697 10.110909369326013 4 3.329820593224696 7.557295882280022 5 2.0009767131033773 5.676722157810688 6 1.1861923610754126 4.038238575459935 7 0.6528556006785585 2.592989594499012 8 0.32128720505834574 1.4583743501119302 9 0.20819410887780804 1.0631549012315973 >10 0.6078753919703902 5.846622769598729 >50 0.033413869326067956 1.2724316204726591 >100 0.024417827584434275 2.531737871794311 >500 0.005140595280933532 2.299127162951458 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGCT 924 0.6737689497517118 TruSeq Adapter, Index 20 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGC 896 0.6533517088501447 TruSeq Adapter, Index 22 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGC 751 0.5476195684670299 TruSeq Adapter, Index 22 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGC 582 0.42438693588257176 TruSeq Adapter, Index 22 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTG 264 0.1925054142147748 No Hit CCTGTATCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGC 262 0.19104703986466284 TruSeq Adapter, Index 20 (95% over 21bp) CTGTCACTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGCT 261 0.1903178526896069 TruSeq Adapter, Index 20 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTG 248 0.18083841941387935 No Hit TCTGTATCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGC 240 0.17500492201343162 TruSeq Adapter, Index 20 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGC 236 0.17208817331320778 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCG 208 0.15167093241164076 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 174 0.12687856845973794 No Hit GCCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTG 173 0.12614938128468195 No Hit GCTGTATCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTGC 169 0.1232326325844581 TruSeq Adapter, Index 20 (95% over 21bp) CGGCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCT 169 0.1232326325844581 No Hit TTCCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCT 165 0.12031588388423424 No Hit TGCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTCTG 158 0.11521157365884248 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 144 0.10500295320805897 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7233536776555174 0.0 2 0.0 0.0 0.0 2.490903389991177 0.0 3 0.0 0.0 0.0 3.487702258292681 0.0 4 0.0 0.0 0.0 4.619400753979539 0.0 5 0.0 0.0 0.0 6.2629886465556845 0.0 6 0.0 0.0 0.0 7.142388379673179 0.0 7 0.0 0.0 0.0 8.173459045202312 0.0 8 0.0 0.0 0.0 9.536309875381912 0.0 9 0.0 0.0 0.0 10.166327594630266 0.0 10 0.0 0.0 0.0 11.512407119783576 0.0 11 0.0 0.0 0.0 13.771428988106956 0.0 12 0.0 0.0 0.0 15.84377893961601 0.0 13 0.0 0.0 0.0 16.55911155834591 0.0 14 0.0 0.0 0.0 16.86682854621953 0.0 15 0.0 0.0 0.0 17.305070038428163 0.0 16 0.0 0.0 0.0 18.236242060974632 0.0 17 0.0 0.0 0.0 19.558258409351097 0.0 18 0.0 0.0 0.0 21.166845317524555 0.0 19 0.0 0.0 0.0 22.014160814939586 0.0 20 0.0 0.0 0.0 22.95335389641167 0.0 21 0.0 0.0 0.0 23.893276165058808 0.0 22 0.0 0.0 0.0 24.84340705415673 0.0 23 0.0 0.0 0.0 25.63895026214279 0.0 24 0.0 0.0 0.0 26.24927992766463 0.0 25 0.0 0.0 0.0 26.792524373081328 0.0 26 0.0 0.0 0.0 27.248266357491303 0.0 27 0.0 0.0 0.0 27.810469669459454 0.0 28 0.0 0.0 0.0 28.347151430300645 0.0 29 0.0 0.0 0.0 28.896229373117787 0.0 30 0.0 0.0 0.0 29.483954236212895 0.0 31 0.0 0.0 0.0 29.96886370762511 0.0 32 0.0 0.0 0.0 30.41148032288408 0.0 33 0.0 0.0 0.0 30.892014671245963 0.0 34 0.0 0.0 0.0 31.444009362763328 0.0 35 0.0 0.0 0.0 31.96537819292834 0.0 36 0.0 0.0 0.0 32.40143212361181 0.0 37 0.0 0.0 0.0 32.863736792597294 0.0 38 0.0 0.0 0.0 33.35083382553468 0.0 39 0.0 0.0 0.0 34.020956839411106 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTAGT 30 2.1514898E-6 45.000004 30 AGGGCAC 30 2.1514898E-6 45.000004 6 CTGTCGG 20 7.0115447E-4 45.0 2 TCGTTAG 25 3.8727943E-5 45.0 1 ACACGCG 45 3.8016879E-10 45.0 36 CTCGTAA 35 1.201497E-7 45.0 33 CGCGGTA 20 7.0115447E-4 45.0 30 AGATAAA 35 1.201497E-7 45.0 18 TTGCTAG 35 1.201497E-7 45.0 1 TGGGTCC 25 3.8727943E-5 45.0 6 GACAAAC 20 7.0115447E-4 45.0 12 ACTCTAC 20 7.0115447E-4 45.0 11 CACGCGG 50 2.1827873E-11 45.0 37 GTCTAGG 20 7.0115447E-4 45.0 2 TAAAACG 35 1.201497E-7 45.0 21 ACTTAGG 20 7.0115447E-4 45.0 2 GCGTTAG 45 3.8016879E-10 45.0 1 AAAACGA 35 1.201497E-7 45.0 22 GCACCGA 35 1.201497E-7 45.0 9 CGTTAGG 75 0.0 45.0 2 >>END_MODULE