##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934234.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 366982 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.269184864652765 33.0 31.0 34.0 30.0 34.0 2 32.44101073077154 34.0 31.0 34.0 31.0 34.0 3 32.49330212380989 34.0 31.0 34.0 30.0 34.0 4 35.997065251156734 37.0 35.0 37.0 35.0 37.0 5 35.1432331830989 37.0 35.0 37.0 35.0 37.0 6 26.209416265647906 36.0 0.0 37.0 0.0 37.0 7 31.15974897951398 37.0 19.0 37.0 17.0 37.0 8 34.721253358475344 37.0 32.0 37.0 32.0 37.0 9 37.21260988277354 39.0 37.0 39.0 34.0 39.0 10 37.35574496841807 39.0 37.0 39.0 34.0 39.0 11 37.38075164449482 39.0 37.0 39.0 35.0 39.0 12 36.97320032045168 39.0 35.0 39.0 34.0 39.0 13 36.864699086058714 39.0 35.0 39.0 33.0 39.0 14 37.9232959654697 40.0 36.0 41.0 33.0 41.0 15 38.0696382928863 40.0 36.0 41.0 33.0 41.0 16 38.17862183976326 40.0 36.0 41.0 34.0 41.0 17 38.15926666702999 40.0 36.0 41.0 34.0 41.0 18 38.15168318882125 40.0 36.0 41.0 34.0 41.0 19 38.13664975393888 40.0 36.0 41.0 34.0 41.0 20 38.048288471914155 40.0 36.0 41.0 34.0 41.0 21 37.9327405703822 40.0 36.0 41.0 34.0 41.0 22 37.91458709146497 40.0 35.0 41.0 34.0 41.0 23 37.88713615381681 39.0 35.0 41.0 34.0 41.0 24 37.81632886626592 39.0 35.0 41.0 34.0 41.0 25 37.707726809489294 39.0 35.0 41.0 34.0 41.0 26 37.68240676654441 39.0 35.0 41.0 34.0 41.0 27 37.65491495495692 39.0 35.0 41.0 34.0 41.0 28 37.63397932323656 39.0 35.0 41.0 34.0 41.0 29 37.65260148999133 39.0 35.0 41.0 34.0 41.0 30 37.38057997394968 39.0 35.0 41.0 33.0 41.0 31 37.38286073976381 39.0 35.0 41.0 33.0 41.0 32 37.27083617180134 39.0 35.0 41.0 33.0 41.0 33 37.15859360949583 39.0 35.0 41.0 33.0 41.0 34 37.04410570545694 39.0 35.0 41.0 32.0 41.0 35 37.003376187387936 39.0 35.0 41.0 32.0 41.0 36 36.94731621714416 39.0 35.0 41.0 32.0 41.0 37 36.905859142955244 39.0 35.0 41.0 32.0 41.0 38 36.834092680294944 39.0 35.0 41.0 32.0 41.0 39 36.81227689641454 39.0 35.0 41.0 32.0 41.0 40 36.75400428358884 39.0 35.0 41.0 32.0 41.0 41 36.675112130840205 39.0 35.0 41.0 31.0 41.0 42 36.60367265969448 39.0 35.0 41.0 31.0 41.0 43 36.492533693750644 39.0 35.0 40.0 31.0 41.0 44 36.37845997896355 39.0 35.0 40.0 31.0 41.0 45 36.36732046803385 39.0 35.0 40.0 31.0 41.0 46 36.29601724335254 38.0 35.0 40.0 31.0 41.0 47 36.22246322707926 38.0 35.0 40.0 31.0 41.0 48 36.22325073164351 38.0 35.0 40.0 31.0 41.0 49 36.2256323198413 38.0 35.0 40.0 31.0 41.0 50 36.10218757323248 38.0 35.0 40.0 31.0 41.0 51 35.130464164454935 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 3.0 11 3.0 12 1.0 13 6.0 14 5.0 15 4.0 16 18.0 17 21.0 18 50.0 19 126.0 20 185.0 21 309.0 22 533.0 23 849.0 24 1370.0 25 2081.0 26 2879.0 27 3521.0 28 3750.0 29 4502.0 30 5519.0 31 7488.0 32 10391.0 33 18303.0 34 28103.0 35 36947.0 36 32589.0 37 53261.0 38 76147.0 39 77978.0 40 36.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.073066253930712 4.190668752145882 53.51243385234154 19.223831141581876 2 21.851480454082218 4.789063223809342 51.840689734101396 21.51876658800704 3 19.498504013820842 3.9522374394384467 53.122768964145386 23.42648958259533 4 18.972592661220443 4.637284662463009 52.84264623333025 23.547476442986305 5 17.62375266361838 7.660593707593288 50.02806677166728 24.687586857121058 6 16.50435171207307 31.083540882114107 39.27822073017205 13.133886675640769 7 79.367652909407 1.9987356328103285 12.937964259827458 5.695647197955213 8 79.78347711876876 2.7870576758533114 10.55310614689549 6.876359058482433 9 73.6594710367266 4.975720880043163 13.626008905068915 7.738799178161326 10 42.79065458251358 23.622139505479833 19.643197759018154 13.94400815298843 11 31.489282853109962 22.143592873764923 27.225041010185784 19.142083262939327 12 30.667989165681153 19.19957927091792 30.795788349292337 19.33664321410859 13 25.34402232262073 24.7690622428348 31.13967442544866 18.747241009095813 14 18.862778010910617 27.49290155920454 31.830443999978204 21.813876429906646 15 16.135941272323983 24.451880473701706 39.548806208478894 19.86337204549542 16 19.343455537328808 22.36594710367266 36.540211781504276 21.750385577494264 17 19.122191279136306 23.28533824547253 30.250529998746533 27.341940476644634 18 21.286330119733393 22.98804846014246 33.63243973818879 22.093181681935352 19 21.7035167937392 25.847589255058836 31.366661035146137 21.08223291605583 20 24.739905499452288 25.264181894479837 31.602639911494297 18.393272694573575 21 23.16762130022726 27.250655345493787 30.20039129984577 19.381332054433187 22 19.745655100250147 25.498798306183957 30.163332261527813 24.592214332038083 23 20.559046492743512 25.743496956253985 29.29925718427607 24.398199366726434 24 22.615278133532435 22.46213710754206 31.359303726068312 23.563281032857198 25 19.666359657966876 23.65374868522162 30.077769481881944 26.60212217492956 26 17.401125940781835 26.18520799385256 31.98304004011096 24.430626025254647 27 16.995111476857176 26.344071371347916 33.71827501076347 22.942542141031442 28 14.512700895411765 24.63690317236268 35.030328462976385 25.820067469249175 29 16.76049506515306 21.919876179213148 34.0398166667575 27.279812088876294 30 19.361985056487786 23.986190058367985 31.919821680627386 24.732003204516843 31 21.38987743268062 24.532810873557832 26.9688976571058 27.10841403665575 32 20.19118103885204 25.61406281506995 29.197344828901688 24.99741131717632 33 21.102942378645274 24.73282068330327 27.63051048825283 26.53372644979863 34 16.840607986222757 23.74857622444698 31.177278449624236 28.233537339706032 35 15.801592448675958 22.82836760386068 33.55178183126148 27.818258116201882 36 18.81291180493866 23.8872751252105 32.536200685592206 24.76361238425863 37 16.698094184455915 26.365053326866168 31.478110643028813 25.458741845649108 38 16.841152972080376 26.510019564992287 27.59399643579249 29.05483102713485 39 18.729256475794454 24.290837152775886 28.46869873726777 28.511207634161895 40 20.448959349504882 22.09617910415225 29.252660893449818 28.202200652893055 41 16.395082047620864 22.865699135107445 30.710770555504084 30.02844826176761 42 17.95019919233096 23.93632385239603 30.54482236185971 27.5686545934133 43 18.981312434942314 23.28888065354704 30.04479783749612 27.685009074014527 44 17.51884288602711 22.040863039604123 29.543683341417292 30.89661073295148 45 18.790839877705174 22.237875427132668 27.858042083807927 31.113242611354234 46 19.587881694470028 22.471674360050358 30.705320696927913 27.2351232485517 47 15.139979617528926 22.771416581739704 33.655601637137515 28.433002163593855 48 16.237308641840745 20.817642282182778 34.18832531295813 28.75672376301835 49 18.372290739055323 19.426293387686588 34.42130676708939 27.780109106168695 50 18.470933179283996 19.733392918453767 31.410532396684303 30.385141505577927 51 16.741693053065273 19.98517638467282 28.91667711222894 34.35645345003297 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 63.0 1 186.0 2 309.0 3 2288.5 4 4268.0 5 2688.5 6 1109.0 7 1133.0 8 1157.0 9 1294.0 10 1431.0 11 1452.5 12 1474.0 13 1424.5 14 1375.0 15 1329.5 16 1284.0 17 1141.0 18 998.0 19 991.0 20 984.0 21 1037.5 22 1091.0 23 1247.5 24 1404.0 25 1516.5 26 2068.0 27 2507.0 28 2638.0 29 2769.0 30 3552.0 31 4335.0 32 5005.5 33 5676.0 34 6859.5 35 8043.0 36 8569.0 37 9095.0 38 10090.0 39 11085.0 40 13792.0 41 16499.0 42 18829.0 43 21159.0 44 25195.0 45 29231.0 46 33994.5 47 38758.0 48 43971.0 49 49184.0 50 46488.0 51 43792.0 52 35986.0 53 28180.0 54 23809.5 55 19439.0 56 17251.0 57 15063.0 58 13956.0 59 12849.0 60 11896.0 61 10943.0 62 9427.5 63 7912.0 64 6460.5 65 5009.0 66 3964.0 67 2919.0 68 2282.0 69 1645.0 70 1400.5 71 1156.0 72 866.0 73 576.0 74 434.0 75 211.0 76 130.0 77 95.0 78 60.0 79 51.0 80 42.0 81 25.0 82 8.0 83 23.0 84 38.0 85 22.5 86 7.0 87 4.0 88 1.0 89 2.0 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 366982.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.485745664319744 #Duplication Level Percentage of deduplicated Percentage of total 1 70.68768833578838 25.79093018218276 2 12.236584387146895 8.929218114988549 3 4.806255410143711 5.260794374767926 4 2.515447374560977 3.6711189256085053 5 1.5117595030039221 2.757883636610976 6 1.0740977596156336 2.3513554605570994 7 0.8243270844802619 2.1053331843989933 8 0.6637577464745079 1.9374157056472738 9 0.5663098174503756 1.859601237003157 >10 4.92426304013355 35.44220246914413 >50 0.1363270217340743 3.326562819187672 >100 0.04419392462807903 2.911972300233704 >500 0.0052433469897720875 1.1270740277957576 >1k 0.0037452478498372055 2.528537561873508 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGC 2164 0.5896746979415884 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGCT 1968 0.5362660838951229 TruSeq Adapter, Index 16 (95% over 24bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1918 0.522641437454698 No Hit TCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGC 1628 0.4436184881002338 TruSeq Adapter, Index 13 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGC 1574 0.42890386994457497 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 727 0.19810235924377761 No Hit TCCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTG 623 0.1697630946476939 TruSeq Adapter, Index 16 (95% over 22bp) TCTGTATCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGC 595 0.16213329264105597 TruSeq Adapter, Index 16 (95% over 23bp) CCTGTATCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGC 580 0.1580458987089285 TruSeq Adapter, Index 16 (95% over 23bp) CTGTCACTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGCT 559 0.15232354720395005 TruSeq Adapter, Index 16 (95% over 24bp) CGCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTG 534 0.14551122398373761 TruSeq Adapter, Index 16 (95% over 22bp) GCTGTATCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTGC 506 0.13788142197709968 TruSeq Adapter, Index 16 (95% over 23bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGC 479 0.13052411289927027 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCG 467 0.12725419775356828 No Hit TTCCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCT 422 0.1149920159571859 No Hit TGCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTG 409 0.11144960788267544 TruSeq Adapter, Index 16 (95% over 22bp) GCCTGTCTCTTATACACATCTGACGCTTCCCCTATCGTATGCCGTCTTCTG 407 0.11090462202505845 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5646053484912067 0.0 2 0.0 0.0 0.0 2.1540566022311722 0.0 3 0.0 0.0 0.0 3.0276689319912147 0.0 4 0.0 0.0 0.0 3.950874974794404 0.0 5 0.0 0.0 0.0 5.371108119744292 0.0 6 0.0 0.0 0.0 6.175234752658168 0.0 7 0.0 0.0 0.0 7.261664059817647 0.0 8 0.0 0.0 0.0 9.017880985988414 0.0 9 0.0 0.0 0.0 9.880866091524926 0.0 10 0.0 0.0 0.0 11.482579527061272 0.0 11 0.0 0.0 0.0 14.451389986429852 0.0 12 0.0 0.0 0.0 17.113373407960065 0.0 13 0.0 0.0 0.0 17.893248170209983 0.0 14 0.0 0.0 0.0 18.185905575750308 0.0 15 0.0 0.0 0.0 18.571755562943142 0.0 16 0.0 0.0 0.0 19.56362982380607 0.0 17 0.0 0.0 0.0 20.99994005155566 0.0 18 0.0 0.0 0.0 22.60029102244797 0.0 19 0.0 0.0 0.0 23.66819081044847 0.0 20 0.0 0.0 0.0 24.824105814454114 0.0 21 0.0 0.0 0.0 26.258781084630854 0.0 22 0.0 0.0 0.0 27.664299611425083 0.0 23 0.0 0.0 0.0 28.859181104250343 0.0 24 0.0 0.0 0.0 29.813451340937704 0.0 25 0.0 0.0 0.0 30.67888888283349 0.0 26 0.0 0.0 0.0 31.4519513218632 0.0 27 0.0 0.0 0.0 32.230736112397885 0.0 28 0.0 0.0 0.0 32.957202260601335 0.0 29 0.0 0.0 0.0 33.7384394874953 0.0 30 0.0 0.0 0.0 34.64992833435972 0.0 31 0.0 0.0 0.0 35.423535759247045 0.0 32 0.0 0.0 0.0 36.226027434588076 0.0 33 0.0 0.0 0.0 36.93505403534778 0.0 34 0.0 0.0 0.0 37.71383882588247 0.0 35 0.0 0.0 0.0 38.491806137630725 0.0 36 0.0 0.0 0.0 39.16949605157746 0.0 37 0.0 0.0 0.0 39.924301464377 0.0 38 2.7249292880849745E-4 0.0 0.0 40.67665444081726 0.0 39 2.7249292880849745E-4 0.0 0.0 41.50339798682224 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTGT 30 2.161447E-6 45.000004 13 AACCGAT 30 2.161447E-6 45.000004 33 GTCGATC 30 2.161447E-6 45.000004 45 CGACGTT 30 2.161447E-6 45.000004 27 CACGCTC 30 2.161447E-6 45.000004 13 AAGCGTG 30 2.161447E-6 45.000004 12 ATCACGC 30 2.161447E-6 45.000004 11 TCGTCAG 30 2.161447E-6 45.000004 1 GGCATAC 30 2.161447E-6 45.000004 8 TCGACGT 30 2.161447E-6 45.000004 26 CCTTCGA 20 7.027003E-4 45.0 11 TATTTCA 20 7.027003E-4 45.0 35 CTTCGAA 20 7.027003E-4 45.0 12 CTATGCA 20 7.027003E-4 45.0 13 GGTACTT 40 6.7939254E-9 45.0 9 AATCCAT 25 3.8855982E-5 45.0 33 AGATCCG 20 7.027003E-4 45.0 30 ACGCCGG 20 7.027003E-4 45.0 27 GATAATA 20 7.027003E-4 45.0 28 GATCGTT 40 6.7939254E-9 45.0 10 >>END_MODULE