##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934232.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1699795 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.37252256889801 33.0 31.0 34.0 31.0 34.0 2 32.54316785259399 34.0 31.0 34.0 31.0 34.0 3 32.59309446139093 34.0 31.0 34.0 31.0 34.0 4 36.05982721445822 37.0 35.0 37.0 35.0 37.0 5 35.18793266246812 37.0 35.0 37.0 35.0 37.0 6 26.230216584941125 37.0 0.0 37.0 0.0 37.0 7 31.184817580943584 37.0 19.0 37.0 17.0 37.0 8 34.79433461093838 37.0 32.0 37.0 32.0 37.0 9 37.32687765289344 39.0 37.0 39.0 35.0 39.0 10 37.39769678108242 39.0 37.0 39.0 35.0 39.0 11 37.41992357901982 39.0 37.0 39.0 35.0 39.0 12 37.082258154659826 39.0 37.0 39.0 34.0 39.0 13 37.054251247944606 39.0 37.0 39.0 33.0 39.0 14 37.87938839683609 40.0 37.0 41.0 33.0 41.0 15 38.10579040413697 40.0 37.0 41.0 33.0 41.0 16 38.30155518753732 40.0 37.0 41.0 33.0 41.0 17 38.32552925499839 40.0 37.0 41.0 34.0 41.0 18 38.32355666418597 40.0 37.0 41.0 34.0 41.0 19 38.32791777832033 40.0 37.0 41.0 34.0 41.0 20 38.22541365282284 40.0 37.0 41.0 34.0 41.0 21 38.13584991131283 40.0 37.0 41.0 34.0 41.0 22 38.19993705123265 40.0 37.0 41.0 34.0 41.0 23 38.16629240584894 40.0 36.0 41.0 34.0 41.0 24 38.121704087845885 40.0 36.0 41.0 34.0 41.0 25 38.00584894060754 40.0 36.0 41.0 34.0 41.0 26 37.96767316058701 40.0 36.0 41.0 34.0 41.0 27 37.93509629102333 40.0 36.0 41.0 34.0 41.0 28 37.874319550298715 40.0 36.0 41.0 34.0 41.0 29 37.847086266285054 40.0 36.0 41.0 34.0 41.0 30 37.58908633099874 40.0 35.0 41.0 33.0 41.0 31 37.5708288352419 40.0 35.0 41.0 33.0 41.0 32 37.544881588662165 40.0 35.0 41.0 33.0 41.0 33 37.46075967984375 40.0 35.0 41.0 33.0 41.0 34 37.344096788142096 40.0 35.0 41.0 32.0 41.0 35 37.2973299721437 40.0 35.0 41.0 32.0 41.0 36 37.210850720233914 40.0 35.0 41.0 32.0 41.0 37 37.142425998429225 39.0 35.0 41.0 32.0 41.0 38 37.10174697537056 39.0 35.0 41.0 32.0 41.0 39 37.066969840480766 39.0 35.0 41.0 32.0 41.0 40 36.98479169546916 39.0 35.0 41.0 32.0 41.0 41 36.85750163990364 39.0 35.0 41.0 31.0 41.0 42 36.84156971870137 39.0 35.0 41.0 31.0 41.0 43 36.78542059483644 39.0 35.0 41.0 31.0 41.0 44 36.66384181621901 39.0 35.0 41.0 31.0 41.0 45 36.60873752423086 39.0 35.0 41.0 31.0 41.0 46 36.55012104400825 39.0 35.0 41.0 31.0 41.0 47 36.45644445359587 39.0 35.0 40.0 31.0 41.0 48 36.408678105300936 39.0 35.0 40.0 31.0 41.0 49 36.40613956388859 39.0 35.0 40.0 31.0 41.0 50 36.305852764598086 38.0 35.0 40.0 31.0 41.0 51 35.26655096644007 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 10.0 10 15.0 11 12.0 12 17.0 13 10.0 14 31.0 15 47.0 16 79.0 17 148.0 18 323.0 19 533.0 20 993.0 21 1669.0 22 2554.0 23 3958.0 24 6023.0 25 8609.0 26 11686.0 27 13897.0 28 16065.0 29 19660.0 30 25325.0 31 34004.0 32 49601.0 33 80978.0 34 119237.0 35 127587.0 36 150778.0 37 255673.0 38 366011.0 39 404038.0 40 221.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.350109866189747 4.3173441503240095 56.20924876235075 16.12329722113549 2 20.632076220956055 4.733041337337738 52.91155698187134 21.723325459834864 3 20.99517883038837 4.698154777487874 51.808776940748736 22.49788945137502 4 19.28897308204813 4.39147073617701 51.73723890233822 24.582317279436637 5 18.658485287931782 7.762406643154026 49.38136657655776 24.197741492356432 6 16.201306628152217 31.0274474274839 39.49711582867346 13.274130115690422 7 84.51642698090063 1.9022882171085338 9.293708947255404 4.287575854735424 8 86.2100429757706 2.4653561164728686 7.281642786336 4.042958121420524 9 81.03994893501863 4.191211293126524 9.170223468124098 5.598616303730744 10 42.91223353404381 26.681040949055625 16.382740271620992 14.023985245279578 11 30.963498539529766 23.229977732608933 26.34064696036875 19.465876767492553 12 28.843713506628742 21.04583199738792 30.043681738091948 20.066772757891393 13 27.004315226247872 21.30804008718698 32.28236346147624 19.405281225088906 14 20.72520509826185 23.15826320232734 35.05893357728432 21.057598122126493 15 18.829917725372766 23.30633988216226 36.79502528246053 21.068717110004442 16 25.498545412829195 23.459417165011075 30.05733044278869 20.984706979371044 17 25.633620524827993 23.522601254857204 28.640218379275144 22.203559841039656 18 25.50466379769325 22.69226583205622 30.505619795328258 21.29745057492227 19 25.376060054300666 24.822346224103494 28.59280089657871 21.208792825017134 20 24.031603811047802 29.176400683611845 28.14133469035972 18.65066081498063 21 24.016425510135043 25.859706611679645 31.716059877808796 18.407808000376516 22 22.708503084195446 22.065072552866667 32.88531852370433 22.341105839233556 23 21.4158177897923 24.291105692156993 32.34625351880668 21.946822999244027 24 21.66502431175524 26.268873599463465 29.420783094431975 22.64531899434932 25 23.960771740121604 25.865648504672624 26.910951026447304 23.262628728758468 26 21.569777531996507 25.368647395715367 27.65162857874038 25.409946493547753 27 20.50753179059828 24.33181648375245 32.515273900676256 22.64537782497301 28 18.67266346824176 24.70462614609409 30.935259840157197 25.687450545506955 29 21.4174650472557 25.637856329733882 29.805888357125422 23.138790265885003 30 25.09249644810109 22.985183507422953 30.7021140784624 21.220205966013552 31 23.327460076067997 24.110672169291004 30.89290179109834 21.668965963542664 32 25.800993649234172 23.64791048332299 28.725640444877175 21.82545542256566 33 25.477601710794538 22.776981930173935 28.395247662218093 23.35016869681344 34 21.573072046923304 22.971475972102517 32.024155854088285 23.43129612688589 35 21.485355586997258 25.126677040466642 30.11151344720981 23.27645392532629 36 24.521486414538224 24.686918128362535 28.83200621251386 21.959589244585377 37 20.56565644680682 25.971367135448688 31.293420677199308 22.16955574054518 38 22.362167202515597 23.890645636679718 31.03185972426087 22.71532743654382 39 21.80562950238117 22.540071008562798 29.39760382869699 26.256695660359043 40 24.89288414191123 21.58489700228557 29.26747048908839 24.25474836671481 41 20.336981812512686 22.5664271279772 29.016499048414662 28.080092011095452 42 20.160725263928885 22.57472224591789 31.792539688609512 25.472012801543713 43 21.009651163816816 21.75544698037116 31.844545959953997 25.39035589585803 44 22.895231483796575 21.91864313049515 29.979732850137808 25.206392535570465 45 21.960412873317075 21.48217873331784 28.532852491035683 28.0245559023294 46 22.206030727234754 21.89993499216082 30.52562220738383 25.368412073220593 47 19.073358846213807 23.04230804302872 33.882321103427174 24.002012007330293 48 19.840804332287128 24.53042866933954 32.0396871387432 23.589079859630132 49 23.139437402745624 21.402580899461405 31.86301877579355 23.594962921999418 50 20.9364658679429 21.896522815986632 30.09545268694166 27.071558629128806 51 19.820743089607866 22.15484808462197 28.78047058615892 29.243938239611246 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 253.0 1 880.0 2 1507.0 3 5943.5 4 10380.0 5 6755.5 6 3131.0 7 3041.0 8 2951.0 9 3061.0 10 3171.0 11 3211.0 12 3251.0 13 3178.5 14 3106.0 15 3223.0 16 3340.0 17 3361.0 18 3382.0 19 3521.5 20 3661.0 21 4279.0 22 4897.0 23 5822.0 24 6747.0 25 8303.5 26 11832.5 27 13805.0 28 16240.5 29 18676.0 30 21783.5 31 24891.0 32 30172.0 33 35453.0 34 39457.0 35 43461.0 36 47872.0 37 52283.0 38 57332.5 39 62382.0 40 68956.0 41 75530.0 42 83640.0 43 91750.0 44 102915.5 45 114081.0 46 135127.5 47 156174.0 48 171215.0 49 186256.0 50 181955.5 51 177655.0 52 157589.0 53 137523.0 54 122757.5 55 107992.0 56 99276.0 57 90560.0 58 82508.5 59 74457.0 60 65426.5 61 56396.0 62 48423.0 63 40450.0 64 34865.0 65 29280.0 66 24194.0 67 19108.0 68 15667.0 69 12226.0 70 10475.0 71 8724.0 72 6684.5 73 4645.0 74 3965.0 75 2473.5 76 1662.0 77 1182.5 78 703.0 79 555.5 80 408.0 81 293.5 82 179.0 83 154.5 84 130.0 85 75.5 86 21.0 87 14.0 88 7.0 89 4.5 90 2.0 91 1.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1699795.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.67699538486169 #Duplication Level Percentage of deduplicated Percentage of total 1 72.63903597471106 25.18903515255858 2 11.373611683493083 7.888053597153973 3 4.22324746311147 4.393485983623358 4 2.0787431279053212 2.883382634107431 5 1.2301979975602422 2.132978514193131 6 0.8464541766631241 1.7611492546586431 7 0.6206707079719374 1.5066096693103197 8 0.5234061304258819 1.4520121575349298 9 0.4305440667878106 1.3436977155282441 >10 5.846278625453259 42.403979603581654 >50 0.12755425415085625 2.9571612008486468 >100 0.05490412971714282 3.421401304594111 >500 0.003171355288198123 0.7647939874066212 >1k 0.0021803067606362097 1.902259224900301 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4692 0.2760332863668854 No Hit CTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGCT 3594 0.21143726155212836 Illumina PCR Primer Index 5 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 3174 0.18672839960112836 Illumina PCR Primer Index 5 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 2385 0.14031103750746415 Illumina PCR Primer Index 5 (95% over 23bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGC 2374 0.1396639006468427 No Hit TCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 2350 0.13825196567821413 Illumina PCR Primer Index 5 (95% over 23bp) GAATCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTC 2123 0.12489741409993557 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCG 2029 0.11936733547280702 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1834 0.10789536385269988 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.941531184642854E-4 0.0 0.0 0.22437999876455691 0.0 2 2.941531184642854E-4 0.0 0.0 0.7390891254533635 0.0 3 2.941531184642854E-4 0.0 0.0 1.0856603296279845 0.0 4 2.941531184642854E-4 0.0 0.0 1.5240661373871556 0.0 5 2.941531184642854E-4 0.0 0.0 2.3686974017455045 0.0 6 2.941531184642854E-4 0.0 0.0 3.016363737980168 0.0 7 2.941531184642854E-4 0.0010589512264714274 0.0 3.7947517200603604 0.0 8 2.941531184642854E-4 0.0010589512264714274 0.0 5.002132610108866 0.0 9 2.941531184642854E-4 0.0010589512264714274 0.0 5.657035113057751 0.0 10 2.941531184642854E-4 0.0010589512264714274 0.0 6.824999485232043 0.0 11 2.941531184642854E-4 0.0010589512264714274 0.0 8.763468535911683 0.0 12 2.941531184642854E-4 0.0010589512264714274 0.0 10.534270309066681 0.0 13 2.941531184642854E-4 0.0010589512264714274 0.0 11.087337002403231 0.0 14 2.941531184642854E-4 0.0010589512264714274 0.0 11.331013445739044 0.0 15 2.941531184642854E-4 0.0010589512264714274 0.0 11.638697607652688 0.0 16 2.941531184642854E-4 0.0010589512264714274 0.0 12.234651825661329 0.0 17 2.941531184642854E-4 0.0010589512264714274 0.0 13.073811842016243 0.0 18 2.941531184642854E-4 0.0010589512264714274 0.0 13.925090966851885 0.0 19 2.941531184642854E-4 0.0010589512264714274 0.0 14.602054953685592 0.0 20 2.941531184642854E-4 0.0010589512264714274 0.0 15.341438232257419 0.0 21 2.941531184642854E-4 0.0010589512264714274 0.0 16.385975955924096 0.0 22 3.5298374215714245E-4 0.0010589512264714274 0.0 17.517994817022053 0.0 23 4.118143658499996E-4 0.0010589512264714274 0.0 18.54188299177254 0.0 24 4.118143658499996E-4 0.0010589512264714274 0.0 19.320094481981652 0.0 25 4.118143658499996E-4 0.0010589512264714274 0.0 20.015943099020763 0.0 26 4.118143658499996E-4 0.0010589512264714274 0.0 20.641547951370608 0.0 27 4.118143658499996E-4 0.0010589512264714274 0.0 21.332925441009063 0.0 28 4.118143658499996E-4 0.0010589512264714274 0.0 21.97941516476987 0.0 29 4.118143658499996E-4 0.0010589512264714274 0.0 22.76268608861657 0.0 30 4.118143658499996E-4 0.0010589512264714274 0.0 23.67426660273739 0.0 31 4.118143658499996E-4 0.0010589512264714274 0.0 24.37976344206213 0.0 32 4.7064498954285666E-4 0.0010589512264714274 0.0 25.04443182854403 0.0 33 4.7064498954285666E-4 0.0010589512264714274 0.0 25.7266317408864 0.0 34 4.7064498954285666E-4 0.0010589512264714274 0.0 26.4506013960507 0.0 35 4.7064498954285666E-4 0.0010589512264714274 0.0 27.261169729290884 0.0 36 4.7064498954285666E-4 0.0010589512264714274 0.0 27.963254392441442 0.0 37 4.7064498954285666E-4 0.0010589512264714274 0.0 28.67428131039331 0.0 38 4.7064498954285666E-4 0.0010589512264714274 0.0 29.515853382319634 0.0 39 4.7064498954285666E-4 0.0010589512264714274 0.0 31.21599957641951 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGAAT 100 0.0 45.0 12 CGTAAGC 20 7.0342416E-4 45.0 44 CGTTAGG 450 0.0 43.0 2 TCGTTAG 315 0.0 42.857143 1 TTAGGGA 3675 0.0 41.87755 4 TTTAGGG 6230 0.0 41.857944 3 TAGGGAC 1645 0.0 41.854103 5 CTTAGGG 3000 0.0 40.65 3 TCGAGGG 890 0.0 40.449436 3 GCGTAGG 195 0.0 40.384617 2 TAGGGAA 1620 0.0 40.13889 5 CGTTTAT 955 0.0 40.052357 1 TACGGGT 45 1.9292202E-8 40.000004 4 TAGGGAT 1980 0.0 39.772728 5 CTAGGGG 2745 0.0 39.7541 4 TTTCGCG 385 0.0 39.74026 1 TTAGGGG 5785 0.0 39.671566 4 TAGGGCG 675 0.0 39.666668 5 CTAGGGA 2065 0.0 39.661015 4 GCTAGGG 1805 0.0 39.63989 3 >>END_MODULE