##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934231.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 660532 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.30223970980967 33.0 31.0 34.0 31.0 34.0 2 32.474962605899485 34.0 31.0 34.0 31.0 34.0 3 32.519864291207696 34.0 31.0 34.0 31.0 34.0 4 36.00584680227453 37.0 35.0 37.0 35.0 37.0 5 35.13561038677914 37.0 35.0 37.0 35.0 37.0 6 26.075116724095125 36.0 0.0 37.0 0.0 37.0 7 31.087571836035195 37.0 19.0 37.0 17.0 37.0 8 34.72121108439864 37.0 32.0 37.0 32.0 37.0 9 37.20541018451794 39.0 37.0 39.0 34.0 39.0 10 37.34061786559924 39.0 37.0 39.0 34.0 39.0 11 37.405669975110975 39.0 37.0 39.0 35.0 39.0 12 37.07372390739586 39.0 37.0 39.0 34.0 39.0 13 37.028779832014195 39.0 37.0 39.0 33.0 39.0 14 38.13564066540304 40.0 37.0 41.0 33.0 41.0 15 38.26739355549769 40.0 37.0 41.0 34.0 41.0 16 38.34948647453871 40.0 37.0 41.0 34.0 41.0 17 38.30751576002374 40.0 37.0 41.0 34.0 41.0 18 38.28485675183034 40.0 37.0 41.0 34.0 41.0 19 38.317118625592705 40.0 37.0 41.0 34.0 41.0 20 38.25372427073934 40.0 37.0 41.0 34.0 41.0 21 38.1510994168337 40.0 36.0 41.0 34.0 41.0 22 38.12641476870159 40.0 36.0 41.0 34.0 41.0 23 38.0782717567052 40.0 36.0 41.0 34.0 41.0 24 38.04178601490919 40.0 36.0 41.0 34.0 41.0 25 37.93557768586533 40.0 36.0 41.0 34.0 41.0 26 37.879056578636614 40.0 36.0 41.0 34.0 41.0 27 37.88849745356773 40.0 36.0 41.0 34.0 41.0 28 37.793934283274695 40.0 36.0 41.0 34.0 41.0 29 37.75298093052267 40.0 36.0 41.0 34.0 41.0 30 37.542079717560995 40.0 36.0 41.0 33.0 41.0 31 37.5519672021946 40.0 35.0 41.0 33.0 41.0 32 37.45503927137519 39.0 35.0 41.0 33.0 41.0 33 37.38961170692714 39.0 35.0 41.0 33.0 41.0 34 37.286900558943394 40.0 35.0 41.0 33.0 41.0 35 37.26017664549182 40.0 35.0 41.0 33.0 41.0 36 37.22436157521513 40.0 35.0 41.0 33.0 41.0 37 37.1655180975335 39.0 35.0 41.0 32.0 41.0 38 37.04244306104776 39.0 35.0 41.0 32.0 41.0 39 37.00973306365172 39.0 35.0 41.0 32.0 41.0 40 36.964181901860925 39.0 35.0 41.0 32.0 41.0 41 36.89947042686804 39.0 35.0 41.0 32.0 41.0 42 36.888729085040545 39.0 35.0 41.0 32.0 41.0 43 36.802646957301086 39.0 35.0 41.0 32.0 41.0 44 36.65432409027874 39.0 35.0 41.0 31.0 41.0 45 36.603110825819186 39.0 35.0 41.0 31.0 41.0 46 36.505033821222895 39.0 35.0 40.0 31.0 41.0 47 36.435659438149855 39.0 35.0 40.0 31.0 41.0 48 36.44131245723145 39.0 35.0 40.0 31.0 41.0 49 36.427022460683204 39.0 35.0 40.0 31.0 41.0 50 36.32277164467429 38.0 35.0 40.0 31.0 41.0 51 35.29820962496896 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 11.0 11 8.0 12 6.0 13 4.0 14 6.0 15 12.0 16 30.0 17 51.0 18 97.0 19 197.0 20 339.0 21 547.0 22 947.0 23 1366.0 24 2148.0 25 3261.0 26 4538.0 27 5461.0 28 6232.0 29 7414.0 30 9654.0 31 12781.0 32 17508.0 33 30605.0 34 46423.0 35 59396.0 36 60705.0 37 100878.0 38 142579.0 39 147259.0 40 65.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.66981160640211 4.697728497635239 52.560511829858356 18.071948066104294 2 21.618180496932776 4.510606601951155 52.04971144471426 21.82150145640181 3 21.83603519587242 5.194146536428212 50.83372190900668 22.13609635869269 4 20.59082678810413 5.052896755948236 49.66481563345909 24.69146082248854 5 18.382152567930092 8.061683612603174 47.486117250943174 26.07004656852355 6 16.263405860730444 31.13414641531372 39.18069071596834 13.4217570079875 7 80.94657034027118 2.457867294847184 11.386427909624363 5.209134455257278 8 81.64858023532547 2.8184857054616583 9.634506730938092 5.898427328274784 9 75.1023417487722 5.238201934198495 12.80498143920355 6.854474877825753 10 40.269055851949645 25.971035468380034 19.402390800142914 14.357517879527412 11 31.995270478947273 24.036534187594242 25.31353515045448 18.654660183004 12 30.895399465885077 20.084416803425118 30.11405957622038 18.906124154469428 13 25.63660806743655 23.21129029327875 30.764293024410627 20.38780861487407 14 19.5394015732773 26.78734716864588 31.118401530887223 22.5548497271896 15 17.330727353103256 24.483900855673912 37.753053599220024 20.43231819200281 16 20.948871515687355 24.31116130634095 33.89268044545911 20.847286732512583 17 19.506852052587913 23.746767756898983 30.76187073449886 25.984509456014244 18 20.81700810861548 23.94766642645625 32.703638885019956 22.531686579908317 19 23.691206482047804 25.655986386730696 29.941774206245874 20.711032924975626 20 26.6784955157358 25.756965597427527 29.313644153500512 18.25089473333616 21 24.84467065940787 26.332410844591937 29.12743061653334 19.695487879466857 22 20.94796315697044 25.387869172121864 29.745265937153686 23.918901733754005 23 21.768665257701368 25.922892456383646 28.76469270224607 23.543749583668923 24 23.836998056112346 21.9730459690068 30.100131409227714 24.08982456565314 25 21.24181720189181 23.837452235470803 28.538359988615237 26.38237057402215 26 18.610453392114234 25.50459326724519 30.74536888447494 25.139584456165636 27 20.128623594314885 25.17410208740833 31.379100482641263 23.318173835635516 28 18.425753786341918 26.53391508662714 31.490071639224144 23.550259487806798 29 19.675806773933736 25.473557677750662 31.829797799349613 23.020837748965985 30 21.79485626737236 23.50029975837658 31.965748820647597 22.739095153603458 31 23.011148589318914 26.395541775417392 28.927137519454014 21.666172115809683 32 23.85259154741935 26.284267832595543 27.774581700810863 22.088558919174243 33 23.565096013516378 24.177481181835248 28.149431064656973 24.107991739991398 34 20.876505604573286 23.86409742450025 31.437084047404213 23.82231292352225 35 19.906984067388105 23.674704632023882 30.51615970157388 25.90215159901413 36 20.30090896428939 25.298698624744905 30.279229469579068 24.12116294138664 37 22.183179618852684 26.189647132917106 29.41568311603374 22.21149013219647 38 21.866465212889004 27.256817232170434 26.77750661587932 24.09921093906124 39 21.15552312378507 24.692369181205454 30.67633362198955 23.475774073019927 40 22.364699969115804 21.575336244118375 33.03443285109579 23.025530935670034 41 19.475210890615443 23.102892819727128 30.58867700580744 26.833219283849985 42 22.437822845827302 22.445392501801578 27.768374582911953 27.348410069459163 43 22.176366928475836 22.289760374970477 28.419213603580147 27.114659092973543 44 20.777040325071304 22.959977714932812 29.187836471208055 27.07514548878783 45 21.790011687548823 21.9114289693762 28.429962515063618 27.86859682801136 46 21.491464455923406 23.284564563109736 30.959741541666414 24.26422943930044 47 18.54732246128878 23.054144235252796 33.27106029685163 25.12747300660679 48 19.824172031029534 21.18080577473915 32.8974220779614 26.097600116269916 49 21.408046847086894 20.314534345043086 33.36901164515875 24.908407162711267 50 20.221276183440015 20.86817898300158 31.523378125510952 27.38716670804745 51 18.56019087644505 20.518763663229034 30.023829277007017 30.8972161833189 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 138.0 1 480.5 2 823.0 3 3345.0 4 5867.0 5 3806.5 6 1746.0 7 1670.0 8 1594.0 9 1700.0 10 1806.0 11 1765.5 12 1725.0 13 1672.5 14 1620.0 15 1638.5 16 1657.0 17 1578.5 18 1500.0 19 1558.5 20 1617.0 21 1797.0 22 1977.0 23 2165.0 24 2353.0 25 2917.0 26 4186.0 27 4891.0 28 6097.5 29 7304.0 30 8604.5 31 9905.0 32 10652.5 33 11400.0 34 13575.0 35 15750.0 36 16556.5 37 17363.0 38 19724.0 39 22085.0 40 25888.5 41 29692.0 42 33580.5 43 37469.0 44 42523.0 45 47577.0 46 55342.0 47 63107.0 48 71714.0 49 80321.0 50 76831.5 51 73342.0 52 62211.5 53 51081.0 54 44342.5 55 37604.0 56 33932.5 57 30261.0 58 28329.5 59 26398.0 60 25093.0 61 23788.0 62 20593.5 63 17399.0 64 13636.0 65 9873.0 66 8347.5 67 6822.0 68 5156.5 69 3491.0 70 2872.0 71 2253.0 72 1963.5 73 1674.0 74 1261.0 75 669.0 76 490.0 77 353.5 78 217.0 79 167.0 80 117.0 81 94.0 82 71.0 83 49.5 84 28.0 85 16.0 86 4.0 87 3.0 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 660532.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.93742168904368 #Duplication Level Percentage of deduplicated Percentage of total 1 68.6424218190059 23.29546815028816 2 12.52992335989071 8.5046658559202 3 5.061882266522639 5.153616990578129 4 2.6903398956286915 3.6521279809923466 5 1.6489996134067133 2.7981397622626814 6 1.2218375869778113 2.4879610454873737 7 0.9101986451120447 2.162285666797458 8 0.7674501082425939 2.0836222358984897 9 0.6395560596652099 1.9534395321577265 >10 5.687682876876943 38.50542069634106 >50 0.1410779650347685 3.219499659816333 >100 0.050843032840566314 2.8338312388053475 >500 0.005496544090872034 1.2990854450189955 >1k 0.002290226704530014 2.0508357396357075 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 3458 0.5235174071808785 TruSeq Adapter, Index 27 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGCT 3119 0.4721951396752921 Illumina Single End Adapter 2 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2311 0.3498694991310035 No Hit TCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 2214 0.33518436654090944 TruSeq Adapter, Index 27 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 2091 0.31656301284419225 TruSeq Adapter, Index 27 (95% over 22bp) CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 919 0.13913027680717968 No Hit CCTGTATCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 912 0.13807052497078115 Illumina Single End Adapter 2 (95% over 21bp) CTGTCACTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGCT 907 0.1373135593733536 Illumina Single End Adapter 2 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTG 758 0.11475598457001326 No Hit TCTGTATCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 714 0.10809468731265101 Illumina Single End Adapter 2 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTG 705 0.10673214923728146 No Hit GCTGTATCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 688 0.10415846620602787 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5139311948550563E-4 0.0 0.0 0.4983861493462845 0.0 2 1.5139311948550563E-4 0.0 0.0 1.7691799943076187 0.0 3 1.5139311948550563E-4 0.0 0.0 2.4478753489611402 0.0 4 1.5139311948550563E-4 0.0 0.0 3.1619966935742703 0.0 5 1.5139311948550563E-4 0.0 0.0 4.3312057553608305 0.0 6 1.5139311948550563E-4 0.0 0.0 5.017924945347084 0.0 7 1.5139311948550563E-4 0.0 0.0 5.931128242083654 0.0 8 1.5139311948550563E-4 0.0 0.0 7.310925133074552 0.0 9 1.5139311948550563E-4 0.0 0.0 7.95404310464898 0.0 10 1.5139311948550563E-4 0.0 0.0 9.281003796939437 0.0 11 1.5139311948550563E-4 0.0 0.0 11.726608249108294 0.0 12 1.5139311948550563E-4 0.0 0.0 14.015066643251197 0.0 13 1.5139311948550563E-4 0.0 0.0 14.763857012226508 0.0 14 1.5139311948550563E-4 0.0 0.0 15.015472376811418 0.0 15 1.5139311948550563E-4 0.0 0.0 15.428018627409422 0.0 16 1.5139311948550563E-4 0.0 0.0 16.3787674177784 0.0 17 1.5139311948550563E-4 0.0 0.0 17.649864048978703 0.0 18 1.5139311948550563E-4 0.0 0.0 19.032234623000853 0.0 19 1.5139311948550563E-4 0.0 0.0 19.977684654187836 0.0 20 1.5139311948550563E-4 0.0 0.0 21.04303803600734 0.0 21 1.5139311948550563E-4 0.0 0.0 22.351225981481594 0.0 22 1.5139311948550563E-4 0.0 0.0 23.742680142672874 0.0 23 1.5139311948550563E-4 0.0 0.0 25.00272507615074 0.0 24 1.5139311948550563E-4 0.0 0.0 25.978150944995853 0.0 25 3.0278623897101126E-4 0.0 0.0 26.85199203066619 0.0 26 3.0278623897101126E-4 0.0 0.0 27.601539365238928 0.0 27 3.0278623897101126E-4 0.0 0.0 28.32610683509656 0.0 28 3.0278623897101126E-4 0.0 0.0 29.064299685707883 0.0 29 3.0278623897101126E-4 0.0 0.0 29.794317307866994 0.0 30 3.0278623897101126E-4 0.0 0.0 30.659831771965628 0.0 31 3.0278623897101126E-4 0.0 0.0 31.467665457540285 0.0 32 3.0278623897101126E-4 0.0 0.0 32.266264162826324 0.0 33 3.0278623897101126E-4 0.0 0.0 33.05699042589912 0.0 34 3.0278623897101126E-4 0.0 0.0 33.80456964991855 0.0 35 3.0278623897101126E-4 0.0 0.0 34.583638642790966 0.0 36 3.0278623897101126E-4 0.0 0.0 35.33379154984164 0.0 37 3.0278623897101126E-4 0.0 0.0 36.099689341318815 0.0 38 3.0278623897101126E-4 0.0 0.0 36.85832026306068 0.0 39 3.0278623897101126E-4 0.0 0.0 37.671906887175794 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACACGT 55 1.8189894E-12 45.000004 41 TCGTTTA 20 7.031106E-4 45.0 11 AATCCCG 20 7.031106E-4 45.0 32 GGTACGC 25 3.888997E-5 45.0 8 CGGCAAA 25 3.888997E-5 45.0 19 CTCCCGT 20 7.031106E-4 45.0 13 GTTACGA 20 7.031106E-4 45.0 18 ACGATAA 20 7.031106E-4 45.0 11 CCCCGAA 20 7.031106E-4 45.0 17 TCGCTTT 35 1.210883E-7 45.0 24 TGCGACC 20 7.031106E-4 45.0 17 TTGCGAG 20 7.031106E-4 45.0 1 GTCCGCG 25 3.888997E-5 45.0 1 GCGATCG 20 7.031106E-4 45.0 9 TGCTCGA 20 7.031106E-4 45.0 42 TAGATCG 40 6.8066583E-9 45.0 36 TTACGAG 25 3.888997E-5 45.0 19 CACCGTA 20 7.031106E-4 45.0 28 CTTAGGT 20 7.031106E-4 45.0 3 GGTTAAC 20 7.031106E-4 45.0 8 >>END_MODULE