##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934230.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 633958 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.287086841715066 33.0 31.0 34.0 31.0 34.0 2 32.436899605336635 34.0 31.0 34.0 30.0 34.0 3 32.5063458462548 34.0 31.0 34.0 30.0 34.0 4 36.02134368522836 37.0 35.0 37.0 35.0 37.0 5 35.14806343637907 37.0 35.0 37.0 35.0 37.0 6 26.016688802728257 36.0 0.0 37.0 0.0 37.0 7 31.04214159297619 37.0 19.0 37.0 17.0 37.0 8 34.5391019594358 37.0 32.0 37.0 32.0 37.0 9 37.16354080238754 39.0 37.0 39.0 34.0 39.0 10 37.3241792043006 39.0 37.0 39.0 34.0 39.0 11 37.37321242101212 39.0 37.0 39.0 35.0 39.0 12 37.09971480760555 39.0 37.0 39.0 34.0 39.0 13 37.044596014247 39.0 37.0 39.0 33.0 39.0 14 38.225357200319266 40.0 37.0 41.0 33.0 41.0 15 38.30388606185268 40.0 37.0 41.0 34.0 41.0 16 38.449408320425015 40.0 37.0 41.0 34.0 41.0 17 38.394415718391436 40.0 37.0 41.0 34.0 41.0 18 38.37199782950921 40.0 37.0 41.0 34.0 41.0 19 38.381533161502816 40.0 37.0 41.0 34.0 41.0 20 38.26781742639102 40.0 37.0 41.0 34.0 41.0 21 38.2224374485376 40.0 37.0 41.0 34.0 41.0 22 38.21881891229388 40.0 37.0 41.0 34.0 41.0 23 38.163786875471246 40.0 36.0 41.0 34.0 41.0 24 38.088303957044474 40.0 36.0 41.0 34.0 41.0 25 37.98050974985725 40.0 36.0 41.0 34.0 41.0 26 37.95429823426789 40.0 36.0 41.0 34.0 41.0 27 37.90510412361702 40.0 36.0 41.0 34.0 41.0 28 37.82457512958272 40.0 36.0 41.0 33.0 41.0 29 37.828179469302384 40.0 36.0 41.0 34.0 41.0 30 37.574323535628544 40.0 36.0 41.0 33.0 41.0 31 37.54671287372349 40.0 36.0 41.0 33.0 41.0 32 37.477924405086775 40.0 35.0 41.0 33.0 41.0 33 37.38566119522113 40.0 35.0 41.0 33.0 41.0 34 37.234129074796755 40.0 35.0 41.0 32.0 41.0 35 37.29689190766581 40.0 35.0 41.0 33.0 41.0 36 37.205220219636004 40.0 35.0 41.0 33.0 41.0 37 37.13692705194981 39.0 35.0 41.0 32.0 41.0 38 37.03069130762606 39.0 35.0 41.0 32.0 41.0 39 36.96744106076428 39.0 35.0 41.0 32.0 41.0 40 36.84362213269649 39.0 35.0 41.0 31.0 41.0 41 36.63834670435581 39.0 35.0 41.0 31.0 41.0 42 36.73518277236031 39.0 35.0 41.0 31.0 41.0 43 36.735184349751876 39.0 35.0 41.0 31.0 41.0 44 36.659196666025196 39.0 35.0 41.0 31.0 41.0 45 36.6021676514848 39.0 35.0 41.0 31.0 41.0 46 36.512062313276274 39.0 35.0 40.0 31.0 41.0 47 36.38134229712379 39.0 35.0 40.0 31.0 41.0 48 36.3785613557996 39.0 35.0 40.0 31.0 41.0 49 36.42300909523975 39.0 35.0 40.0 31.0 41.0 50 36.32101337943523 39.0 35.0 40.0 31.0 41.0 51 35.3142179765852 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 7.0 10 4.0 11 5.0 12 4.0 13 3.0 14 2.0 15 7.0 16 17.0 17 45.0 18 70.0 19 165.0 20 371.0 21 604.0 22 939.0 23 1453.0 24 2168.0 25 3253.0 26 4401.0 27 5377.0 28 6065.0 29 7265.0 30 9278.0 31 12345.0 32 17349.0 33 28200.0 34 42310.0 35 56429.0 36 59814.0 37 98283.0 38 136702.0 39 140940.0 40 83.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.89465863669202 3.6623877291555593 49.52741348795977 17.915540146192647 2 18.501067894087623 11.548241366147284 49.41273712138659 20.537953618378506 3 18.27360803081592 11.334662548623095 49.400433467201296 20.991295953359685 4 17.326699876017024 4.088283450954164 55.34783061338449 23.23718605964433 5 22.140583445591034 7.582205761264942 46.501345515002576 23.775865278141453 6 15.124345776849571 34.74047176626843 37.14946416008632 12.985718296795687 7 77.90090195249527 2.081683644657848 15.014717063275484 5.002697339571391 8 77.45765492351228 6.984847576653343 9.62697844336691 5.930519056467463 9 72.7899955517558 4.247126781269421 11.53215197221267 11.430725694762113 10 42.25327229879582 21.76831903690781 19.62290877313639 16.355499891159983 11 30.76923076923077 24.165954211477732 25.842879181270682 19.221935838020816 12 28.02456945097309 20.594739714618317 30.13306875218863 21.24762208221996 13 23.601248032204026 23.630429776105043 33.64497332630868 19.12334886538225 14 19.42478839292193 28.052016064155673 29.573094747601576 22.95010079532083 15 16.288303010609535 24.492316525700442 38.887591922493286 20.331788541196737 16 17.91932588594197 25.006230696670755 31.908422955463926 25.166020461923345 17 17.955921370185408 24.25555005221166 31.691689354815306 26.096839222787633 18 18.717486016423802 24.598474977837647 32.403250688531415 24.280788317207133 19 21.53581152063701 25.879474665514117 29.915704194915122 22.669009618933746 20 24.038343234094373 25.393480325195046 31.77276728111326 18.795409159597323 21 22.85151382268226 27.565233028055484 29.677675808176566 19.905577341085685 22 19.911729168178333 24.116108638111672 29.9286388057253 26.043523387984692 23 20.09013215386508 26.922445966452035 29.24704791169131 23.74037396799157 24 21.808542521744343 23.33877007625111 29.724839815886856 25.127847586117692 25 18.95393701160014 28.023623016035764 28.32222323876345 24.700216733600648 26 18.888317522611906 25.4302335485947 30.688310582089034 24.993138346704356 27 20.153070077197544 27.574539638272565 28.703478779351315 23.568911505178576 28 16.287987532297095 26.571003126390075 33.485814517680986 23.65519482363185 29 18.685307228554574 22.707813451364288 31.87892573325047 26.727953586830672 30 18.77017089460185 26.613434959413716 29.26834269778124 25.348051448203197 31 20.4150748156818 29.225595386445157 25.37581353969821 24.98351625817483 32 20.71509469081548 29.33506636086302 24.878304240974956 25.071534707346544 33 19.080443814889943 26.051410345795777 24.90133415778332 29.966811681530952 34 18.78673350600513 27.99097101069787 28.18877591259989 25.03351957069711 35 17.061224876095892 25.58907687890996 27.025134157152365 30.324564087841782 36 18.986431277781808 26.631417223222993 27.673599828379796 26.708551670615403 37 18.04867199404377 27.46080970663672 28.181835389726135 26.30868290959338 38 17.495953990642914 28.79559844658479 25.33385492414324 28.37459263862906 39 19.547351717306192 25.590023313847286 27.703885746374368 27.15873922247215 40 19.261686105388684 25.90250458232249 28.32206549960723 26.513743812681597 41 16.851431798321023 28.307238018922387 26.781427160789832 28.059903021966754 42 18.61763713053546 25.99856772846151 28.798280012240557 26.58551512876247 43 20.451828039081455 22.8125522510955 27.536366762466912 29.199252947356136 44 19.583947201549627 23.46559235785336 28.43784604027396 28.51261440032305 45 18.89793961114143 23.543673240183104 27.14959035141129 30.40879679726417 46 21.49826960145625 25.69633950514072 27.826922288227294 24.97846860517574 47 15.84568693825143 24.642326463267285 33.219077604510076 26.29290899397121 48 18.199155149079278 24.816470491736045 28.74370226418785 28.240672094996828 49 18.500594676618956 21.794030519371947 33.1894226431404 26.5159521608687 50 19.44813378804274 22.429719318945416 28.660100511390347 29.462046381621494 51 17.25776786474814 23.589417595487397 26.58362225888781 32.56919228087665 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 79.0 1 376.5 2 674.0 3 2825.5 4 4977.0 5 3351.5 6 1726.0 7 1686.0 8 1646.0 9 1625.5 10 1605.0 11 1639.0 12 1673.0 13 1613.0 14 1553.0 15 1434.5 16 1316.0 17 1293.0 18 1270.0 19 1363.0 20 1456.0 21 1591.0 22 1726.0 23 2317.5 24 2909.0 25 3177.0 26 4486.0 27 5527.0 28 6219.5 29 6912.0 30 8021.5 31 9131.0 32 10674.5 33 12218.0 34 14094.0 35 15970.0 36 17185.0 37 18400.0 38 20467.0 39 22534.0 40 26047.0 41 29560.0 42 32934.5 43 36309.0 44 41341.5 45 46374.0 46 67611.0 47 88848.0 48 81078.5 49 73309.0 50 68286.0 51 63263.0 52 53105.0 53 42947.0 54 37478.5 55 32010.0 56 28497.5 57 24985.0 58 23504.0 59 22023.0 60 20087.0 61 18151.0 62 16157.0 63 14163.0 64 11906.0 65 9649.0 66 7804.5 67 5960.0 68 4789.0 69 3618.0 70 3152.5 71 2687.0 72 2218.5 73 1750.0 74 1217.5 75 531.0 76 377.0 77 356.0 78 335.0 79 241.5 80 148.0 81 93.5 82 39.0 83 29.0 84 19.0 85 10.0 86 1.0 87 1.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 633958.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.08648904725596 #Duplication Level Percentage of deduplicated Percentage of total 1 70.56407772002686 22.6415350689336 2 11.673057130657954 7.490948395416989 3 4.494649934725943 4.326526077055009 4 2.2772282970189455 2.922730432415989 5 1.4564457830411863 2.3366115832736574 6 1.0598124860429057 2.0403397035336477 7 0.8453729273682683 1.898753442239405 8 0.7299435801072802 1.8737061350581636 9 0.6030698389758042 1.7415354404724799 >10 6.117909865438824 39.34351821062464 >50 0.12267230015987861 2.551648931489492 >100 0.04460810914893425 2.4758541582772886 >500 0.0035483723186652237 0.7753512529567623 >1k 0.00608292397485467 3.8225939053890974 >5k 0.0015207309937136674 3.758347262863836 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGC 9096 1.4347953649926335 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCG 8211 1.2951962117364242 No Hit GAATCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTC 5800 0.9148871060858922 No Hit GCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 2803 0.4421428548894406 RNA PCR Primer, Index 14 (95% over 23bp) CTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGCT 2684 0.4233718952990576 RNA PCR Primer, Index 16 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 2430 0.38330614961874443 RNA PCR Primer, Index 16 (95% over 23bp) GAATGACTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCT 2200 0.34702614368775214 No Hit GAATCAGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTC 2192 0.34576423043797855 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2126 0.33535344612734597 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTC 1939 0.30585622391388706 No Hit TCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 1612 0.25427551982938934 RNA PCR Primer, Index 14 (95% over 23bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCACCAACTCGTA 1576 0.24859691020540794 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCACCAACT 1535 0.24212960480031798 No Hit GAACTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCT 1385 0.21846873136706219 RNA PCR Primer, Index 14 (95% over 21bp) GCTGTATCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 1020 0.16089393934613966 RNA PCR Primer, Index 14 (95% over 23bp) CTGTCACTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGCT 854 0.13470923941333654 RNA PCR Primer, Index 16 (95% over 24bp) CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 816 0.1287151514769117 No Hit CCTGTATCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 690 0.10884001779297682 RNA PCR Primer, Index 16 (95% over 23bp) TCTGTATCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 652 0.10284592985655203 RNA PCR Primer, Index 14 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.44924111691941737 0.0 2 0.0 0.0 0.0 1.6367014849564168 0.0 3 0.0 0.0 0.0 2.1674937456424557 0.0 4 0.0 0.0 0.0 2.9647074411869556 0.0 5 0.0 0.0 0.0 4.827922354477741 0.0 6 0.0 0.0 0.0 5.379220705472602 0.0 7 0.0 0.0 0.0 6.447745749718435 0.0 8 1.5773915622170555E-4 0.0 0.0 7.84373728228053 0.0 9 1.5773915622170555E-4 0.0 0.0 8.354181191813968 0.0 10 1.5773915622170555E-4 0.0 0.0 10.772006978380272 0.0 11 1.5773915622170555E-4 0.0 0.0 12.710147990876367 0.0 12 1.5773915622170555E-4 0.0 0.0 16.02219705406352 0.0 13 1.5773915622170555E-4 0.0 0.0 16.6717668993845 0.0 14 1.5773915622170555E-4 0.0 0.0 16.95348903239647 0.0 15 1.5773915622170555E-4 0.0 0.0 17.540751911009878 0.0 16 1.5773915622170555E-4 0.0 0.0 18.34948056495856 0.0 17 1.5773915622170555E-4 0.0 0.0 19.3555409033406 0.0 18 1.5773915622170555E-4 0.0 0.0 20.381003157937908 0.0 19 1.5773915622170555E-4 0.0 0.0 21.46609081358702 0.0 20 1.5773915622170555E-4 0.0 0.0 22.28365286028412 0.0 21 1.5773915622170555E-4 0.0 0.0 23.36038034065348 0.0 22 3.154783124434111E-4 0.0 0.0 24.510298789509715 0.0 23 3.154783124434111E-4 0.0 0.0 25.49474886348938 0.0 24 3.154783124434111E-4 0.0 0.0 26.34101943661883 0.0 25 3.154783124434111E-4 0.0 0.0 27.060152249833585 0.0 26 3.154783124434111E-4 0.0 0.0 27.71555844393477 0.0 27 3.154783124434111E-4 0.0 0.0 28.32585123935655 0.0 28 3.154783124434111E-4 0.0 0.0 28.97131986661577 0.0 29 3.154783124434111E-4 0.0 0.0 29.631458235403606 0.0 30 3.154783124434111E-4 0.0 0.0 30.37803766180094 0.0 31 3.154783124434111E-4 0.0 0.0 31.106950302701442 0.0 32 3.154783124434111E-4 0.0 0.0 31.745478407086903 0.0 33 3.154783124434111E-4 0.0 0.0 32.40482808009364 0.0 34 3.154783124434111E-4 0.0 0.0 33.033576356793354 0.0 35 3.154783124434111E-4 0.0 0.0 33.71674464238956 0.0 36 3.154783124434111E-4 0.0 0.0 34.3994397105171 0.0 37 3.154783124434111E-4 0.0 0.0 35.02203616012417 0.0 38 4.732174686651166E-4 0.0 0.0 35.662299395228075 0.0 39 4.732174686651166E-4 0.0 0.0 36.33221759170166 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGCGG 75 0.0 45.000004 2 GCGCGAC 45 3.8380676E-10 45.000004 9 CGATTCA 30 2.1639553E-6 45.000004 10 ATCCGGC 45 3.8380676E-10 45.000004 6 ATCGACG 30 2.1639553E-6 45.000004 16 GGAATCG 20 7.03089E-4 45.0 8 AGATCGA 20 7.03089E-4 45.0 44 GGTCGTC 20 7.03089E-4 45.0 9 GAATCGA 20 7.03089E-4 45.0 9 TTCGTAG 70 0.0 45.0 1 CGATTTA 35 1.2107739E-7 45.0 10 TAGCCGG 25 3.8888196E-5 45.0 2 TAGTTAG 25 3.8888196E-5 45.0 1 CCCGTTG 20 7.03089E-4 45.0 32 CCGTATG 20 7.03089E-4 45.0 17 ACGATAG 20 7.03089E-4 45.0 40 ACTAGCG 20 7.03089E-4 45.0 15 TAACCGG 20 7.03089E-4 45.0 11 TCTACCG 35 1.2107739E-7 45.0 14 TACGATA 20 7.03089E-4 45.0 39 >>END_MODULE