##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934229.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1128005 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.305558929260066 33.0 31.0 34.0 31.0 34.0 2 32.47477892385229 34.0 31.0 34.0 31.0 34.0 3 32.4804916644873 34.0 31.0 34.0 30.0 34.0 4 36.00805226927186 37.0 35.0 37.0 35.0 37.0 5 35.085880824996345 37.0 35.0 37.0 35.0 37.0 6 25.71515551792767 36.0 0.0 37.0 0.0 37.0 7 30.90851015731313 37.0 19.0 37.0 17.0 37.0 8 34.72650032579643 37.0 32.0 37.0 32.0 37.0 9 37.30016090354209 39.0 37.0 39.0 35.0 39.0 10 37.2919596987602 39.0 37.0 39.0 34.0 39.0 11 37.34996919339896 39.0 37.0 39.0 34.0 39.0 12 37.24862833054818 39.0 37.0 39.0 34.0 39.0 13 37.33931853138949 39.0 37.0 39.0 34.0 39.0 14 38.58106480024468 40.0 38.0 41.0 35.0 41.0 15 38.67250588428243 40.0 38.0 41.0 35.0 41.0 16 38.71668033386377 40.0 38.0 41.0 35.0 41.0 17 38.690530627080555 40.0 38.0 41.0 35.0 41.0 18 38.64166559545392 40.0 38.0 41.0 35.0 41.0 19 38.61370472648614 40.0 38.0 41.0 35.0 41.0 20 38.508376292658276 40.0 38.0 41.0 34.0 41.0 21 38.39768440742727 40.0 37.0 41.0 34.0 41.0 22 38.38001870559084 40.0 37.0 41.0 34.0 41.0 23 38.300527036670935 40.0 37.0 41.0 34.0 41.0 24 38.25285792172907 40.0 37.0 41.0 34.0 41.0 25 38.12852513951623 40.0 37.0 41.0 34.0 41.0 26 38.084527107592606 40.0 37.0 41.0 34.0 41.0 27 38.06011764132251 40.0 37.0 41.0 34.0 41.0 28 37.96824659465162 40.0 37.0 41.0 34.0 41.0 29 37.923553530347824 40.0 36.0 41.0 34.0 41.0 30 37.676253208097485 40.0 36.0 41.0 33.0 41.0 31 37.6760971804203 40.0 36.0 41.0 33.0 41.0 32 37.52758542736956 40.0 36.0 41.0 33.0 41.0 33 37.33801711871845 40.0 36.0 41.0 33.0 41.0 34 37.18759579966401 40.0 36.0 41.0 32.0 41.0 35 37.102022597417566 40.0 36.0 41.0 32.0 41.0 36 37.023160358331744 40.0 36.0 41.0 31.0 41.0 37 36.95618281833857 40.0 36.0 41.0 31.0 41.0 38 36.8621309302707 40.0 36.0 41.0 31.0 41.0 39 36.800726947132326 40.0 35.0 41.0 31.0 41.0 40 36.77104179502751 40.0 35.0 41.0 31.0 41.0 41 36.699611260588384 40.0 35.0 41.0 31.0 41.0 42 36.62911334612878 39.0 35.0 41.0 31.0 41.0 43 36.55623157698769 39.0 35.0 41.0 30.0 41.0 44 36.44411682572329 39.0 35.0 41.0 30.0 41.0 45 36.416612515015444 39.0 35.0 41.0 30.0 41.0 46 36.334242312755705 39.0 35.0 41.0 30.0 41.0 47 36.27650232046844 39.0 35.0 41.0 30.0 41.0 48 36.224009645347316 39.0 35.0 41.0 30.0 41.0 49 36.19389275756756 39.0 35.0 41.0 30.0 41.0 50 36.12039042380131 39.0 35.0 41.0 29.0 41.0 51 35.223232166524085 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 5.0 10 14.0 11 14.0 12 9.0 13 10.0 14 13.0 15 21.0 16 35.0 17 76.0 18 161.0 19 353.0 20 664.0 21 1248.0 22 2016.0 23 3428.0 24 5992.0 25 9569.0 26 12440.0 27 12774.0 28 12340.0 29 12983.0 30 15272.0 31 19456.0 32 26394.0 33 40116.0 34 60665.0 35 84233.0 36 104544.0 37 177626.0 38 253044.0 39 272340.0 40 145.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.613547812288065 4.165761676588313 56.33662971352077 15.884060797602848 2 22.840501593521306 4.493774407028337 51.90748267959805 20.758241319852306 3 19.013036289732757 4.493774407028337 55.06278784225247 21.43040146098643 4 16.837336713933006 4.1710808019467995 55.15285836498952 23.838724119130678 5 16.36579625090314 7.853777243895195 53.31705089959707 22.463375605604586 6 14.5037477670755 31.858014813764125 41.379603813812885 12.258633605347494 7 82.86683126404581 1.4617843006015045 11.793564744837123 3.8778196905155564 8 85.36318544687302 1.834477684052819 9.226377542652736 3.5759593264214256 9 80.49459000624998 4.208669287813441 10.975394612612533 4.321346093324054 10 36.71765639336705 28.808826202011517 19.661083062575077 14.812434342046357 11 24.53969618928994 26.022225078789546 29.214232206417524 20.22384652550299 12 22.390503588193315 22.246532595156935 33.83992092233633 21.523042894313413 13 22.23695816951166 23.757962065770986 34.58867646863267 19.41640329608468 14 20.047340215690536 25.693325827456437 33.876179626863355 20.383154329989672 15 18.198323588991183 25.998643623033583 35.76092304555388 20.042109742421353 16 20.0983151670427 25.79332538419599 33.279551065819746 20.828808382941567 17 20.48714323074809 25.694566956706755 31.051280801060276 22.76700901148488 18 21.04831095606846 24.532426717966676 32.83886152986911 21.580400796095763 19 21.58430148802532 27.839770213784515 30.330627967074612 20.245300331115555 20 22.31869539585374 26.984454856139823 31.20695386988533 19.489895878121107 21 22.181639265783396 27.90351106599705 31.099064277197353 18.815785391022203 22 21.106732682922505 25.249356164201398 31.243921791126812 22.399989361749284 23 20.067464239963474 26.57904885173381 30.1327565037389 23.22073040456381 24 19.968705812474237 25.488450849065387 31.851365907066015 22.691477431394365 25 19.132273349852174 28.271505888715033 29.442599988475227 23.153620772957566 26 18.649651375658795 28.42762221798662 30.118483517360296 22.804242888994285 27 18.941671357839727 27.32310583729682 30.925838094689297 22.809384710174157 28 18.16835918280504 25.7814460042287 32.46058306479138 23.589611748174875 29 17.882810803143602 24.183935354896477 33.18159050713428 24.751663334825643 30 19.627306616548683 25.599886525325687 31.914220238385465 22.85858661974016 31 19.26223731277787 27.69145526837204 28.963524097854176 24.08278332099592 32 18.293535932908096 28.68595440623047 28.90120167907057 24.11930798179086 33 18.95505782332525 26.584102020824375 28.941981640152303 25.518858515698067 34 17.780240335814117 25.72382214617843 30.122384209289855 26.3735533087176 35 17.065704495990712 25.90174688941982 30.423712660848135 26.608835953741337 36 18.020842106196337 25.862030753409783 30.19543353087974 25.92169360951414 37 17.016147978067472 26.89402972504554 29.434798604616113 26.65502369227087 38 17.213576180956643 28.1083860443881 29.11946312294715 25.558574651708106 39 18.5262476673419 27.14854987344914 30.577524035797715 23.747678423411244 40 19.760284750510856 25.067708033209072 30.171054206320008 25.000953009960064 41 17.5889291270872 24.60609660418172 29.582049724956892 28.222924543774187 42 18.22013200296098 24.98082898568712 29.793662262135364 27.005376749216538 43 18.25266731973706 24.986325415224222 31.27610249954566 25.48490476549306 44 18.47846419120483 25.643326049086664 28.90253146041019 26.975678299298316 45 19.134046391638336 24.606185256271026 28.163616296027055 28.096152056063584 46 19.45026839420038 25.31114667044916 28.653685045722316 26.58489988962815 47 16.700014627594737 24.96292126364688 31.050128323899273 27.28693578485911 48 16.643543246705466 25.165579939805234 31.344630564580832 26.84624624890847 49 18.76037783520463 23.67959361882261 31.829468841006907 25.730559704965845 50 18.384847584895457 23.393601978714635 30.752168651734703 27.469381784655212 51 16.91605976923861 23.0567240393438 29.311838156745758 30.71537803467183 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 131.0 1 380.5 2 630.0 3 6959.0 4 13288.0 5 8810.5 6 4333.0 7 4429.0 8 4525.0 9 4825.0 10 5125.0 11 5427.0 12 5729.0 13 5734.5 14 5740.0 15 5755.5 16 5771.0 17 5475.0 18 5179.0 19 5160.5 20 5142.0 21 5165.5 22 5189.0 23 5636.5 24 6084.0 25 6737.5 26 8393.5 27 9396.0 28 10765.5 29 12135.0 30 14096.5 31 16058.0 32 19172.5 33 22287.0 34 25942.5 35 29598.0 36 33512.0 37 37426.0 38 41454.0 39 45482.0 40 51824.5 41 58167.0 42 65889.0 43 73611.0 44 82866.0 45 92121.0 46 106502.0 47 120883.0 48 129391.0 49 137899.0 50 129486.5 51 121074.0 52 103025.0 53 84976.0 54 72089.0 55 59202.0 56 50411.5 57 41621.0 58 36616.5 59 31612.0 60 26830.0 61 22048.0 62 18803.0 63 15558.0 64 12355.0 65 9152.0 66 7316.0 67 5480.0 68 4527.0 69 3574.0 70 2737.0 71 1900.0 72 1524.5 73 1149.0 74 893.0 75 523.0 76 409.0 77 273.5 78 138.0 79 125.5 80 113.0 81 67.0 82 21.0 83 16.5 84 12.0 85 9.0 86 6.0 87 4.0 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1128005.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.97974475521145 #Duplication Level Percentage of deduplicated Percentage of total 1 73.80341214810797 30.982484040412437 2 11.172997065992126 9.380791299621517 3 4.171850838364125 5.253997000540226 4 2.2366243488864255 3.755716771181726 5 1.463437511392156 3.0717366596722284 6 1.0299270357245003 2.594164444572364 7 0.8158572616179862 2.397463571958618 8 0.6498819304357233 2.1825502048572596 9 0.5494110475860663 2.0757721989020754 >10 3.9690605189294508 30.530849606017668 >50 0.09475468027870028 2.6720931147860525 >100 0.03820144010353724 2.5889917711715893 >500 0.003056115054175015 0.9072284329832718 >1k 0.001309763594646435 1.0289253379329473 >5k 2.1829393244107248E-4 0.5772355453900636 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6299 0.5584195105518149 No Hit CTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGCT 2523 0.22366922132437358 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2430 0.21542457701871887 No Hit CCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGC 1773 0.1571801543432875 No Hit TCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGC 1619 0.1435277325898378 No Hit GCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTGC 1548 0.13723343424896164 No Hit CGCTGTCTCTTATACACATCTGACGCTCCATCCTTCGTATGCCGTCTTCTG 1335 0.1183505392263332 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7730417861622954E-4 0.0 0.0 0.23670107845266644 0.0 2 1.7730417861622954E-4 0.0 0.0 0.7103691916259236 0.0 3 1.7730417861622954E-4 0.0 0.0 1.0688782407879398 0.0 4 1.7730417861622954E-4 0.0 0.0 1.5515002149813166 0.0 5 1.7730417861622954E-4 0.0 0.0 2.430928940917815 0.0 6 1.7730417861622954E-4 0.0 0.0 3.2734783977021378 0.0 7 1.7730417861622954E-4 0.0 0.0 4.127729930275132 0.0 8 1.7730417861622954E-4 0.0 0.0 5.4173518734402775 0.0 9 1.7730417861622954E-4 0.0 0.0 6.016374040895209 0.0 10 1.7730417861622954E-4 0.0 0.0 7.141280402125877 0.0 11 1.7730417861622954E-4 0.0 0.0 9.33577422085895 0.0 12 2.659562679243443E-4 0.0 0.0 11.509168842336692 0.0 13 2.659562679243443E-4 0.0 0.0 12.327427626650591 0.0 14 2.659562679243443E-4 0.0 0.0 12.626805732244094 0.0 15 2.659562679243443E-4 0.0 0.0 12.925474621123133 0.0 16 2.659562679243443E-4 0.0 0.0 13.57032991875036 0.0 17 3.5460835723245907E-4 0.0 0.0 14.562612754376088 0.0 18 3.5460835723245907E-4 0.0 0.0 15.651260411079738 0.0 19 3.5460835723245907E-4 0.0 0.0 16.519341669584797 0.0 20 3.5460835723245907E-4 0.0 0.0 17.380419413034517 0.0 21 3.5460835723245907E-4 0.0 0.0 18.67775408796947 0.0 22 3.5460835723245907E-4 0.0 0.0 20.118705147583565 0.0 23 3.5460835723245907E-4 0.0 0.0 21.51949681074109 0.0 24 4.4326044654057384E-4 0.0 0.0 22.53181501855045 0.0 25 4.4326044654057384E-4 0.0 0.0 23.399984929144818 0.0 26 4.4326044654057384E-4 0.0 0.0 24.12161293611287 0.0 27 4.4326044654057384E-4 0.0 0.0 24.84634376620671 0.0 28 4.4326044654057384E-4 0.0 0.0 25.624886414510573 0.0 29 4.4326044654057384E-4 0.0 0.0 26.475414559332627 0.0 30 4.4326044654057384E-4 0.0 0.0 27.408655103479152 0.0 31 4.4326044654057384E-4 0.0 0.0 28.275761189001823 0.0 32 4.4326044654057384E-4 0.0 0.0 29.073807296953472 0.0 33 4.4326044654057384E-4 0.0 0.0 29.886303695462342 0.0 34 4.4326044654057384E-4 0.0 0.0 30.72539572076365 0.0 35 4.4326044654057384E-4 0.0 0.0 31.56767922128005 0.0 36 4.4326044654057384E-4 0.0 0.0 32.35260482001409 0.0 37 4.4326044654057384E-4 0.0 0.0 33.14284954410663 0.0 38 4.4326044654057384E-4 0.0 0.0 33.932739659841936 0.0 39 4.4326044654057384E-4 0.0 0.0 34.78424297764638 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGCTAG 30 2.165465E-6 45.000004 1 TATTGCG 20 7.03323E-4 45.000004 1 CCCGTAG 20 7.03323E-4 45.000004 1 GCGATCG 30 2.165465E-6 45.000004 9 TCCCGCA 30 2.165465E-6 45.000004 17 TACGGAC 25 3.89076E-5 45.0 4 CCGTCGG 25 3.89076E-5 45.0 2 CGTTTAT 1660 0.0 44.32229 1 GCTACGA 140 0.0 43.392857 10 CGTTTTT 3735 0.0 43.07229 1 CGGTAGT 115 0.0 43.043476 12 TAGGGCG 570 0.0 42.236843 5 TTAGGGA 2730 0.0 42.115387 4 CCGTAGG 150 0.0 42.0 2 CGAATAT 140 0.0 41.785713 14 TACGGTT 65 0.0 41.53846 33 AGGGCGA 845 0.0 41.53846 6 TCCGTAG 125 0.0 41.399998 1 TTTAGGG 4405 0.0 40.913734 3 CGTTAGG 275 0.0 40.909092 2 >>END_MODULE