##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934228.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 625564 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.39845163724255 33.0 31.0 34.0 31.0 34.0 2 32.564915819964064 34.0 31.0 34.0 31.0 34.0 3 32.61787443011426 34.0 31.0 34.0 31.0 34.0 4 36.08366530043289 37.0 35.0 37.0 35.0 37.0 5 35.19474745989219 37.0 35.0 37.0 35.0 37.0 6 26.098627798274837 37.0 0.0 37.0 0.0 37.0 7 31.11786324021203 37.0 19.0 37.0 17.0 37.0 8 34.770925117174265 37.0 32.0 37.0 32.0 37.0 9 37.29162803486134 39.0 37.0 39.0 35.0 39.0 10 37.43608487700699 39.0 37.0 39.0 35.0 39.0 11 37.51055687347738 39.0 37.0 39.0 35.0 39.0 12 37.16368908696792 39.0 37.0 39.0 34.0 39.0 13 37.128116387771676 39.0 37.0 39.0 33.0 39.0 14 38.29671464470462 40.0 37.0 41.0 34.0 41.0 15 38.42618181353147 40.0 37.0 41.0 34.0 41.0 16 38.506152847670265 40.0 37.0 41.0 35.0 41.0 17 38.48136561566842 40.0 37.0 41.0 34.0 41.0 18 38.440335441297776 40.0 37.0 41.0 34.0 41.0 19 38.46449763733207 40.0 37.0 41.0 34.0 41.0 20 38.38865088144458 40.0 37.0 41.0 34.0 41.0 21 38.29477879161844 40.0 37.0 41.0 34.0 41.0 22 38.2750398040808 40.0 37.0 41.0 34.0 41.0 23 38.23219846410599 40.0 37.0 41.0 34.0 41.0 24 38.20039036773216 40.0 36.0 41.0 34.0 41.0 25 38.08937854480117 40.0 36.0 41.0 34.0 41.0 26 38.034244297945534 40.0 36.0 41.0 34.0 41.0 27 38.01480104353831 40.0 36.0 41.0 34.0 41.0 28 37.939181282810395 40.0 36.0 41.0 34.0 41.0 29 37.918598256932945 40.0 36.0 41.0 34.0 41.0 30 37.667352980670245 40.0 36.0 41.0 33.0 41.0 31 37.695263793952336 40.0 36.0 41.0 33.0 41.0 32 37.61203010403412 40.0 35.0 41.0 33.0 41.0 33 37.52077964844524 40.0 35.0 41.0 33.0 41.0 34 37.4578060757972 40.0 35.0 41.0 33.0 41.0 35 37.41571286071449 40.0 35.0 41.0 33.0 41.0 36 37.333681286007504 40.0 35.0 41.0 33.0 41.0 37 37.30237193956174 40.0 35.0 41.0 33.0 41.0 38 37.19617657026299 39.0 35.0 41.0 33.0 41.0 39 37.15361337928653 39.0 35.0 41.0 33.0 41.0 40 37.022454936665156 39.0 35.0 41.0 32.0 41.0 41 36.927743604171596 39.0 35.0 41.0 32.0 41.0 42 36.91461465173827 39.0 35.0 41.0 32.0 41.0 43 36.88440830994111 39.0 35.0 41.0 32.0 41.0 44 36.77304960004092 39.0 35.0 41.0 32.0 41.0 45 36.72219629006784 39.0 35.0 41.0 31.0 41.0 46 36.63624345390719 39.0 35.0 41.0 31.0 41.0 47 36.57059709318311 39.0 35.0 40.0 31.0 41.0 48 36.5275095753592 39.0 35.0 40.0 31.0 41.0 49 36.48303131254356 39.0 35.0 40.0 31.0 41.0 50 36.3754451982531 38.0 35.0 40.0 31.0 41.0 51 35.32888561362227 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 9.0 11 7.0 12 11.0 13 6.0 14 6.0 15 7.0 16 26.0 17 41.0 18 92.0 19 204.0 20 320.0 21 535.0 22 823.0 23 1248.0 24 1937.0 25 2783.0 26 3824.0 27 4747.0 28 5397.0 29 6276.0 30 8269.0 31 11288.0 32 15838.0 33 27392.0 34 42935.0 35 56985.0 36 55900.0 37 94375.0 38 135513.0 39 148674.0 40 91.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.006611633661787 4.438714504031562 52.175636705437014 17.37903715686964 2 20.60156914400445 5.534046076820277 51.35477744883018 22.509607330345098 3 20.726256626020678 5.731467923345972 51.18245295445391 22.359822496179447 4 19.96790096616813 4.392356337640913 51.164229399389995 24.475513296800965 5 19.16062944798614 8.256229578428426 48.04991975241542 24.533221221170017 6 16.568568523764153 32.007756200804394 38.19673126970222 13.22694400572923 7 83.11347839709447 2.2045705954946255 9.936473326470194 4.745477680940719 8 84.08236407465904 3.230045207205018 7.723270520682137 4.964320197453818 9 78.56414371671005 4.939542556796747 10.025672832835648 6.470640893657563 10 40.75809989065867 27.899943091354363 16.768867773720995 14.573089244265974 11 33.10356734083164 25.460384548982994 24.038787398251817 17.39726071193355 12 31.50820699400861 21.171135167624737 28.401090855611894 18.919566982754763 13 26.0336272547653 24.498852235742465 29.519281800103585 19.948238709388647 14 19.749857728385905 28.3070956768612 29.142821517862284 22.800225076890616 15 17.482303968898467 25.93052029848265 36.575794003491254 20.011381729127635 16 20.74927585346983 23.59486799112481 34.68549980497599 20.970356350429373 17 21.208541412229604 22.794470270028327 30.57944510873388 25.41754320900819 18 21.238594292510438 24.517715213791075 30.976207070739363 23.26748342295912 19 24.715616627555296 25.54095184505502 28.286314429858493 21.45711709753119 20 28.65877831844543 24.930622606160203 28.009284421737824 18.401314653656538 21 27.006029758745708 25.69729076481383 26.785908396263213 20.51077108017725 22 22.857613289767315 25.45015378122782 27.31535062759366 24.376882301411207 23 23.42957714958022 26.264778663733846 27.341247258473956 22.96439692821198 24 24.07251696069467 22.633175822138103 29.27054625905583 24.0237609581114 25 22.137942720489033 24.925667078028788 28.056601722605524 24.87978847887666 26 21.405323835770602 27.512133051134658 27.99857408674412 23.08396902635062 27 22.444705897398187 26.995958846736706 28.434180995070047 22.125154260795057 28 19.40472917239483 26.730758163832956 30.79972632696255 23.06478633680966 29 22.187178290310825 24.8044964224284 30.175809349642886 22.832515937617895 30 24.096495322620868 24.14301334475769 29.14633834427812 22.61415298834332 31 24.552723622203324 25.670914566695014 25.81958041063744 23.956781400464223 32 25.50610329238895 26.145366421341382 27.47312824906804 20.875402037201628 33 24.97698077255085 24.77764065707106 28.18176877186027 22.063609798517817 34 22.809496710168744 24.518034925283423 29.347756584458185 23.324711780089647 35 22.67841499830553 22.541418623833852 30.167656706587977 24.612509671272644 36 22.81077555613814 25.240742753739028 29.80206661508655 22.146415075036288 37 24.569828187044013 25.73293859621078 28.806165316418465 20.891067900326746 38 22.71662052164127 24.838066129125078 27.898184678146443 24.54712867108721 39 24.1391768068495 23.472738201047374 29.827483678728317 22.56060131337481 40 24.526986847069203 22.00670115287964 31.63785000415625 21.828461995894905 41 20.63386000473173 23.490642044618937 31.330127692770045 24.54537025787929 42 22.3582239387177 23.491601179095984 29.918441598301694 24.231733283884623 43 23.34916970925437 23.35236682417786 29.164561899342033 24.133901567225735 44 22.951288757025658 24.12367079947056 28.235480302574956 24.689560140928826 45 22.605360922303714 22.93754116285464 27.31678932930923 27.140308585532413 46 22.97222985977454 24.68364547832036 29.093106380801963 23.251018281103132 47 20.922079915084627 23.581599964192314 31.593090395227346 23.903229725495713 48 21.753969218177517 21.491166371466388 31.694758649794423 25.06010576056167 49 21.761002871009204 21.51530458913876 33.16766949504767 23.55602304480437 50 22.16543790883107 21.580206022085672 30.677596536885115 25.576759532198146 51 19.801331278654143 22.553088093304602 29.132910461599455 28.5126701664418 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 118.0 1 457.0 2 796.0 3 2019.5 4 3243.0 5 2208.5 6 1174.0 7 1154.0 8 1134.0 9 1217.0 10 1300.0 11 1314.5 12 1329.0 13 1324.0 14 1319.0 15 1379.0 16 1439.0 17 1361.0 18 1283.0 19 1240.5 20 1198.0 21 1453.5 22 1709.0 23 2105.5 24 2502.0 25 3004.0 26 4276.5 27 5047.0 28 5763.0 29 6479.0 30 7666.5 31 8854.0 32 10237.0 33 11620.0 34 13021.5 35 14423.0 36 16129.5 37 17836.0 38 20612.0 39 23388.0 40 26764.5 41 30141.0 42 33906.0 43 37671.0 44 40504.0 45 43337.0 46 50641.0 47 57945.0 48 61699.5 49 65454.0 50 63054.5 51 60655.0 52 53853.5 53 47052.0 54 41682.0 55 36312.0 56 33580.5 57 30849.0 58 30803.0 59 30757.0 60 28825.5 61 26894.0 62 22269.5 63 17645.0 64 14426.0 65 11207.0 66 9334.0 67 7461.0 68 6374.5 69 5288.0 70 4092.0 71 2896.0 72 2349.0 73 1802.0 74 1461.5 75 896.5 76 672.0 77 509.0 78 346.0 79 251.0 80 156.0 81 123.0 82 90.0 83 65.5 84 41.0 85 50.5 86 60.0 87 34.0 88 8.0 89 6.0 90 4.0 91 3.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 625564.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.800479484519084 #Duplication Level Percentage of deduplicated Percentage of total 1 70.30396474451366 21.65395823793746 2 11.48266852093511 7.073433924131899 3 4.287736886742634 3.961930560453967 4 2.1881988428343173 2.695902942670672 5 1.398410447840557 2.1535856154825113 6 1.0115870928800337 1.8694420500633473 7 0.871843693765144 1.879724266246446 8 0.6886333579123826 1.6968190090188664 9 0.6295164259207555 1.7450466985566009 >10 6.849886744679464 45.631305663070535 >50 0.23336876914091179 4.638076382623063 >100 0.047210233757232455 2.4658525012602053 >500 0.003218879574356758 0.6445949612957221 >1k 0.0037553595034162178 1.890327187188685 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGC 2348 0.3753412920180829 TruSeq Adapter, Index 14 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGCT 1967 0.3144362527255405 TruSeq Adapter, Index 21 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGC 1611 0.2575276070873644 TruSeq Adapter, Index 14 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGC 1544 0.24681727209366267 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCG 1435 0.2293929957606256 No Hit TCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGC 1389 0.2220396314365916 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1146 0.18319468511615117 No Hit GAATCTGTCTCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTC 978 0.15633891975880965 No Hit CCTGTATCTTATACACATCTGACGCTGCGTGTTTCGTATGCCGTCTTCTGC 696 0.11125959933755779 TruSeq Adapter, Index 21 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.33249995204327615 0.0 2 0.0 0.0 0.0 1.2681356344035142 0.0 3 0.0 0.0 0.0 1.7641680147834593 0.0 4 0.0 0.0 0.0 2.286256881789873 0.0 5 0.0 0.0 0.0 3.1991930481933104 0.0 6 0.0 0.0 0.0 3.712969416398642 0.0 7 0.0 0.0 0.0 4.373813071084653 0.0 8 0.0 0.0 0.0 5.415433113158685 0.0 9 0.0 0.0 0.0 5.866705884609728 0.0 10 0.0 0.0 0.0 7.01894610303662 0.0 11 0.0 0.0 0.0 8.627894188284492 0.0 12 0.0 0.0 0.0 10.320926396020232 0.0 13 0.0 0.0 0.0 10.855643866974443 0.0 14 0.0 0.0 0.0 11.046831339399326 0.0 15 0.0 0.0 0.0 11.373896196072664 0.0 16 0.0 0.0 0.0 12.052963405822586 0.0 17 0.0 0.0 0.0 12.936166403437538 0.0 18 0.0 0.0 0.0 13.956205919777993 0.0 19 0.0 0.0 0.0 14.656853655261491 0.0 20 0.0 0.0 0.0 15.37428624409333 0.0 21 0.0 0.0 0.0 16.319673126970223 0.0 22 1.59855746174652E-4 0.0 0.0 17.34738571912706 0.0 23 1.59855746174652E-4 0.0 0.0 18.275668037163264 0.0 24 1.59855746174652E-4 0.0 0.0 18.981591012270528 0.0 25 1.59855746174652E-4 0.0 0.0 19.631884187709012 0.0 26 1.59855746174652E-4 0.0 0.0 20.18434564648861 0.0 27 1.59855746174652E-4 0.0 0.0 20.7160258582655 0.0 28 1.59855746174652E-4 0.0 0.0 21.26337193316751 0.0 29 1.59855746174652E-4 0.0 0.0 21.87434059504703 0.0 30 1.59855746174652E-4 0.0 0.0 22.543816460026473 0.0 31 3.19711492349304E-4 0.0 0.0 23.21137405605182 0.0 32 3.19711492349304E-4 0.0 0.0 23.83273334143269 0.0 33 3.19711492349304E-4 0.0 0.0 24.431552966602936 0.0 34 4.79567238523956E-4 0.0 0.0 25.05946633757697 0.0 35 4.79567238523956E-4 0.0 0.0 25.69217538093624 0.0 36 6.39422984698608E-4 0.0 0.0 26.337193316750962 0.0 37 6.39422984698608E-4 0.0 0.0 26.97309947503373 0.0 38 6.39422984698608E-4 0.0 0.0 27.552256843424495 0.0 39 6.39422984698608E-4 0.0 0.0 28.19056083789988 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGC 30 2.163908E-6 45.000004 32 GACGATA 30 2.163908E-6 45.000004 9 GCGCTAG 45 3.8380676E-10 45.000004 1 TATCAGG 25 3.8887607E-5 45.0 2 GTACCGA 20 7.030819E-4 45.0 40 ACCGGGC 20 7.030819E-4 45.0 11 CTCGTCA 25 3.8887607E-5 45.0 45 ACGCACA 20 7.030819E-4 45.0 38 GCGCGAT 20 7.030819E-4 45.0 40 TTCGTCC 25 3.8887607E-5 45.0 16 CACCTAT 25 3.8887607E-5 45.0 10 CCCGTAA 20 7.030819E-4 45.0 16 TAACCGA 20 7.030819E-4 45.0 16 GTTAAAC 20 7.030819E-4 45.0 24 ATATACG 25 3.8887607E-5 45.0 20 CGTACCC 20 7.030819E-4 45.0 38 CATCGCG 25 3.8887607E-5 45.0 1 CTTTCGT 20 7.030819E-4 45.0 15 CGATGAA 20 7.030819E-4 45.0 19 TAGGCAC 20 7.030819E-4 45.0 5 >>END_MODULE