##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934223.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1771948 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.40469415581044 33.0 31.0 34.0 31.0 34.0 2 32.5796953409468 34.0 31.0 34.0 31.0 34.0 3 32.60968549867152 34.0 31.0 34.0 31.0 34.0 4 36.082051504897436 37.0 35.0 37.0 35.0 37.0 5 35.19276017129171 37.0 35.0 37.0 35.0 37.0 6 26.041384397284798 37.0 0.0 37.0 0.0 37.0 7 31.090511685444493 37.0 19.0 37.0 17.0 37.0 8 34.79845063173411 37.0 32.0 37.0 32.0 37.0 9 37.33275863625795 39.0 37.0 39.0 35.0 39.0 10 37.453165104167844 39.0 37.0 39.0 35.0 39.0 11 37.508555555806375 39.0 37.0 39.0 35.0 39.0 12 37.220894179738906 39.0 37.0 39.0 34.0 39.0 13 37.226390955039314 39.0 37.0 39.0 34.0 39.0 14 38.3129606512155 40.0 38.0 41.0 33.0 41.0 15 38.46750468975387 40.0 38.0 41.0 34.0 41.0 16 38.57996961536117 40.0 38.0 41.0 34.0 41.0 17 38.56823394365975 40.0 38.0 41.0 34.0 41.0 18 38.53010923571121 40.0 38.0 41.0 34.0 41.0 19 38.52316828710549 40.0 37.0 41.0 34.0 41.0 20 38.44241591739713 40.0 37.0 41.0 34.0 41.0 21 38.32922128640344 40.0 37.0 41.0 34.0 41.0 22 38.3451991819173 40.0 37.0 41.0 34.0 41.0 23 38.29582075771975 40.0 37.0 41.0 34.0 41.0 24 38.26808405212794 40.0 37.0 41.0 34.0 41.0 25 38.15241643659972 40.0 36.0 41.0 34.0 41.0 26 38.11156760807879 40.0 36.0 41.0 34.0 41.0 27 38.07622966362444 40.0 36.0 41.0 34.0 41.0 28 37.983767582344406 40.0 36.0 41.0 34.0 41.0 29 37.96243399919185 40.0 36.0 41.0 34.0 41.0 30 37.708690661351234 40.0 36.0 41.0 33.0 41.0 31 37.682224309065504 40.0 36.0 41.0 33.0 41.0 32 37.57472058999474 40.0 36.0 41.0 33.0 41.0 33 37.45440046773382 40.0 36.0 41.0 33.0 41.0 34 37.302350294703906 40.0 35.0 41.0 33.0 41.0 35 37.23190409650847 40.0 35.0 41.0 32.0 41.0 36 37.144539794621515 40.0 35.0 41.0 32.0 41.0 37 37.060618031680384 40.0 35.0 41.0 32.0 41.0 38 36.97740057834654 39.0 35.0 41.0 32.0 41.0 39 36.93228187283148 39.0 35.0 41.0 32.0 41.0 40 36.8804750478005 39.0 35.0 41.0 32.0 41.0 41 36.75810238223695 39.0 35.0 41.0 31.0 41.0 42 36.6547370464596 39.0 35.0 41.0 31.0 41.0 43 36.57768851004657 39.0 35.0 41.0 31.0 41.0 44 36.49028583231562 39.0 35.0 41.0 31.0 41.0 45 36.46454072015657 39.0 35.0 41.0 31.0 41.0 46 36.423203728326115 39.0 35.0 41.0 31.0 41.0 47 36.320334456767355 39.0 35.0 40.0 31.0 41.0 48 36.26101838202927 39.0 35.0 40.0 31.0 41.0 49 36.2303002119701 39.0 35.0 40.0 31.0 41.0 50 36.15442834665577 38.0 35.0 40.0 31.0 41.0 51 35.181597315496845 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 17.0 10 23.0 11 19.0 12 15.0 13 12.0 14 19.0 15 31.0 16 80.0 17 146.0 18 275.0 19 577.0 20 1033.0 21 1656.0 22 2698.0 23 4269.0 24 6884.0 25 10609.0 26 14190.0 27 16073.0 28 17562.0 29 19866.0 30 24559.0 31 32399.0 32 45436.0 33 74871.0 34 113543.0 35 136291.0 36 164991.0 37 277138.0 38 387896.0 39 418516.0 40 247.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.844408526661052 4.312146857582729 53.946109028030165 16.89733558772605 2 22.374245745360476 4.357069169072682 51.16086928058837 22.107815804978475 3 21.58449345014639 4.2353951696099434 51.72804168068137 22.45206969956229 4 19.00541099400208 4.701830979238668 51.16888305977376 25.123874966985486 5 18.274915516708166 7.85677683543761 49.596658592690076 24.271649055164147 6 16.407817836640803 31.277328680074135 39.14511035312548 13.169743130159576 7 83.04267393851286 2.263441139356234 10.377448999632044 4.316435922498854 8 84.71213602205032 2.341942314334281 8.842810285629149 4.103111377986261 9 79.32004776663875 4.485289636038981 11.066577574511216 5.128085022811053 10 40.72393772277742 24.90338316925779 18.929900877452386 15.442778230512408 11 30.996902843650037 23.73991787569387 26.09382442374155 19.169354856914538 12 27.3746182167874 21.92609489668997 30.424086937088447 20.27519994943418 13 25.7820771264168 21.85995300087813 32.11883192960516 20.239137943099912 14 21.14057523132733 23.518128071478394 34.14304482975798 21.19825186743629 15 19.82129272416572 23.558196967405365 35.16457593563694 21.45593437279198 16 24.2079338671338 24.199976523013092 30.774379383593647 20.81771022625946 17 24.36177585346748 24.017465523818984 29.85934124477693 21.7614173779366 18 24.329325691273105 22.91771541828541 31.497086821960917 21.255872068480564 19 24.527243463126457 25.357064654267507 29.0350506899751 21.080641192630935 20 25.09774553203593 27.501992157783413 28.75857530807902 18.64168700210164 21 24.97511213647353 26.097887748398936 30.456932144735628 18.470067970391906 22 23.821861589617754 22.76709023063882 31.558601042468513 21.852447137274908 23 22.450884563203886 24.047658283425925 30.966202168460928 22.535254984909265 24 22.403535543932442 24.44575122972006 30.827089734010254 22.323623492337248 25 22.65450227659051 25.76627530830476 28.171086284699097 23.408136130405634 26 21.612598112359958 26.12887059891148 28.57375047123279 23.684780817495774 27 21.642960177160955 25.335957940074994 30.443105553887584 22.577976328876467 28 19.076801350829708 26.465731500021445 30.213527710745463 24.243939438403384 29 20.928548693302513 25.83597261319181 30.113863386510214 23.121615306995466 30 24.208723958039403 24.54648782018434 29.919331718538018 21.325456503238243 31 24.20341906195893 25.85352391830911 28.897179826947518 21.045877192784438 32 24.74440559203769 25.933435969904306 27.850873727671466 21.471284710386534 33 25.403002796921804 24.21515755541359 28.32250156325129 22.059338084413312 34 22.41228297895875 25.328790686859886 29.924128699036316 22.334797635145048 35 22.745701341122874 26.839218758112544 28.7778196651369 21.637260235627682 36 25.545049854736146 27.092837938810842 26.973985692582403 20.38812651387061 37 23.954991907211724 26.972010465318398 28.021307623022796 21.05169000444708 38 23.32534589051146 26.210532137511937 29.153507890750745 21.31061408122586 39 23.642905999498858 24.07288475734051 29.262991916241333 23.0212173269193 40 26.495867824563703 23.39425310449291 28.626686561908137 21.483192509035256 41 23.57507105174644 24.34405524315612 27.97757044789125 24.103303257206193 42 22.958122924600495 24.565280696724734 29.81757929690939 22.659017081765377 43 22.107251454331617 23.91797050477779 30.892385103851804 23.082392937038783 44 22.693555341353132 24.078641133938465 28.639102276139027 24.58870124856937 45 23.03380234634425 23.581956129638115 27.802678182429734 25.581563341587906 46 23.64025355145862 24.26408675649624 28.347502296907134 23.748157395138005 47 21.560790722978325 25.727335113671508 30.548074774203304 22.16379938914686 48 21.82716422829564 25.24464600541325 30.85350134428324 22.074688422007867 49 24.41047931429139 23.199721436520708 30.308902970064583 22.080896279123316 50 22.795194892852386 23.5293022142862 29.34984548079289 24.325657412068526 51 22.065376636334697 22.980132599827986 28.155961687363284 26.798529076474026 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 366.0 1 1048.0 2 1730.0 3 9876.0 4 18022.0 5 11614.0 6 5206.0 7 5043.5 8 4881.0 9 5083.5 10 5286.0 11 5276.0 12 5266.0 13 5265.5 14 5265.0 15 5105.5 16 4946.0 17 5153.0 18 5360.0 19 5349.0 20 5338.0 21 5855.0 22 6372.0 23 7147.5 24 7923.0 25 9563.0 26 12537.0 27 13871.0 28 17126.0 29 20381.0 30 23344.5 31 26308.0 32 31214.5 33 36121.0 34 40901.0 35 45681.0 36 49885.5 37 54090.0 38 59247.5 39 64405.0 40 71405.5 41 78406.0 42 87309.0 43 96212.0 44 105517.0 45 114822.0 46 130927.5 47 147033.0 48 165627.5 49 184222.0 50 179805.0 51 175388.0 52 156192.0 53 136996.0 54 122586.0 55 108176.0 56 99235.5 57 90295.0 58 84683.0 59 79071.0 60 70746.0 61 62421.0 62 56247.5 63 50074.0 64 42854.0 65 35634.0 66 29888.5 67 24143.0 68 20234.0 69 16325.0 70 13346.5 71 10368.0 72 8356.0 73 6344.0 74 5134.0 75 3025.0 76 2126.0 77 1594.0 78 1062.0 79 816.5 80 571.0 81 385.0 82 199.0 83 125.5 84 52.0 85 49.5 86 47.0 87 28.0 88 9.0 89 7.0 90 5.0 91 3.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1771948.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.841029927802495 #Duplication Level Percentage of deduplicated Percentage of total 1 73.87699333289386 26.47827529020314 2 10.881870111984552 7.800348647081957 3 3.9102048597092773 4.204373082020369 4 1.8454339622370408 2.645690154812837 5 1.0899646536584615 1.9532727886009904 6 0.793977589188951 1.7074184721675398 7 0.6001934078990444 1.5058084926485595 8 0.5147711539377786 1.475994266740268 9 0.42291517188080247 1.364194379907142 >10 5.914042089563509 43.710787796889015 >50 0.10534342727420917 2.4842844818034724 >100 0.04059939437434355 2.5098884547689573 >500 0.0023990495088532376 0.6606247996830359 >1k 0.001107253619470725 0.9728804744230853 >5k 1.8454226991178752E-4 0.5261584182497548 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7955 0.448940939576105 No Hit CTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGCT 3790 0.21388889515945161 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 3367 0.19001686279732816 No Hit GCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 2374 0.1339768435642581 No Hit TCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 2268 0.12799472670755574 No Hit CGCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTG 1843 0.1040098242160605 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1287012937174229E-4 0.0 0.0 0.22675608990783025 0.0 2 1.1287012937174229E-4 0.0 0.0 0.7215223020088626 0.0 3 1.6930519405761342E-4 0.0 0.0 1.0693316056678863 0.0 4 1.6930519405761342E-4 0.0 0.0 1.4700770000022574 0.0 5 1.6930519405761342E-4 0.0 0.0 2.18189247088515 0.0 6 1.6930519405761342E-4 0.0 0.0 2.90031084433629 0.0 7 1.6930519405761342E-4 0.0 0.0 3.6550733994451305 0.0 8 1.6930519405761342E-4 0.0 0.0 4.744947368658674 0.0 9 1.6930519405761342E-4 0.0 0.0 5.329276028416184 0.0 10 1.6930519405761342E-4 0.0 0.0 6.305884822805184 0.0 11 1.6930519405761342E-4 0.0 0.0 8.057911405978054 0.0 12 1.6930519405761342E-4 0.0 0.0 9.46116928939224 0.0 13 1.6930519405761342E-4 0.0 0.0 9.974446202710238 0.0 14 1.6930519405761342E-4 0.0 0.0 10.204983441952022 0.0 15 1.6930519405761342E-4 0.0 0.0 10.478580635549125 0.0 16 1.6930519405761342E-4 0.0 0.0 11.058338055067079 0.0 17 1.6930519405761342E-4 0.0 0.0 11.843124064588803 0.0 18 1.6930519405761342E-4 0.0 0.0 12.645461379227832 0.0 19 1.6930519405761342E-4 0.0 0.0 13.241810707763433 0.0 20 1.6930519405761342E-4 0.0 0.0 13.908534561962314 0.0 21 1.6930519405761342E-4 0.0 0.0 14.855909992844033 0.0 22 1.6930519405761342E-4 0.0 0.0 15.885906358425869 0.0 23 1.6930519405761342E-4 0.0 0.0 16.878881321573772 0.0 24 1.6930519405761342E-4 0.0 0.0 17.64323783767921 0.0 25 1.6930519405761342E-4 0.0 0.0 18.326102120378252 0.0 26 1.6930519405761342E-4 0.0 0.0 18.92216927359042 0.0 27 1.6930519405761342E-4 0.0 0.0 19.54938858250919 0.0 28 1.6930519405761342E-4 0.0 0.0 20.180727651150033 0.0 29 1.6930519405761342E-4 0.0 0.0 20.856537550763342 0.0 30 1.6930519405761342E-4 0.0 0.0 21.68133602114735 0.0 31 1.6930519405761342E-4 0.0 0.0 22.351445979227382 0.0 32 1.6930519405761342E-4 0.0 0.0 23.020314365884325 0.0 33 2.2574025874348458E-4 0.0 0.0 23.67529972662855 0.0 34 2.2574025874348458E-4 0.0 0.0 24.358051139198217 0.0 35 2.2574025874348458E-4 0.0 0.0 25.059538993243596 0.0 36 2.2574025874348458E-4 0.0 0.0 25.70267299040378 0.0 37 3.3861038811522685E-4 0.0 0.0 26.33305266294496 0.0 38 3.3861038811522685E-4 0.0 0.0 27.05846898441715 0.0 39 3.3861038811522685E-4 0.0 0.0 28.136999505628832 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAGCGTA 20 7.034321E-4 45.000004 9 GCGATCG 30 2.1661708E-6 45.000004 9 CGTTTAT 1615 0.0 42.910217 1 TAGGGCG 710 0.0 42.78169 5 TTAGGGA 3265 0.0 41.69219 4 TTTAGGG 6100 0.0 41.64344 3 CGTTTTT 4045 0.0 41.050674 1 TCGAGGG 840 0.0 40.982143 3 CTAGGGA 2035 0.0 40.687958 4 TGTTAGG 1550 0.0 40.35484 2 TTAGGGG 5785 0.0 40.0605 4 TGTAGGG 2190 0.0 39.760273 3 GTTAGGG 2475 0.0 39.727272 3 GCTAGGG 1965 0.0 39.61832 3 TAGGGAG 2130 0.0 39.61268 5 TTTTAGG 3575 0.0 39.524475 2 TAGGGAC 1390 0.0 39.496403 5 TAGGGGA 3190 0.0 39.4279 5 TTCGTAG 355 0.0 39.295773 1 TAGGGAA 1605 0.0 39.25234 5 >>END_MODULE