##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934222.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1422685 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.21085904469366 33.0 31.0 34.0 30.0 34.0 2 32.374755479955155 34.0 31.0 34.0 30.0 34.0 3 32.41849320123569 34.0 31.0 34.0 30.0 34.0 4 35.949672626055666 37.0 35.0 37.0 35.0 37.0 5 35.05451593290152 37.0 35.0 37.0 35.0 37.0 6 25.916735609077204 36.0 0.0 37.0 0.0 37.0 7 31.027725743927856 37.0 19.0 37.0 17.0 37.0 8 34.7538632937017 37.0 32.0 37.0 32.0 37.0 9 37.28623553351585 39.0 37.0 39.0 35.0 39.0 10 37.22393432137121 39.0 37.0 39.0 34.0 39.0 11 37.27386807339643 39.0 37.0 39.0 34.0 39.0 12 37.029118181466735 39.0 37.0 39.0 34.0 39.0 13 37.00585653183944 39.0 37.0 39.0 33.0 39.0 14 37.723668978023944 40.0 37.0 41.0 32.0 41.0 15 37.93951155737215 40.0 37.0 41.0 33.0 41.0 16 38.16089085075052 40.0 37.0 41.0 33.0 41.0 17 38.239306663105324 40.0 37.0 41.0 34.0 41.0 18 38.23383320974074 40.0 37.0 41.0 34.0 41.0 19 38.254828018851676 40.0 37.0 41.0 34.0 41.0 20 38.11188913919806 40.0 37.0 41.0 33.0 41.0 21 38.028371705612976 40.0 37.0 41.0 33.0 41.0 22 38.115637685081374 40.0 37.0 41.0 34.0 41.0 23 38.071734783174065 40.0 36.0 41.0 34.0 41.0 24 38.00373659664648 40.0 36.0 41.0 34.0 41.0 25 37.871225886264355 40.0 36.0 41.0 34.0 41.0 26 37.85060501797657 40.0 36.0 41.0 34.0 41.0 27 37.840290015006836 40.0 36.0 41.0 34.0 41.0 28 37.79219995993491 40.0 36.0 41.0 34.0 41.0 29 37.78018113637242 40.0 36.0 41.0 34.0 41.0 30 37.488193802563465 39.0 36.0 41.0 33.0 41.0 31 37.44789394700865 39.0 35.0 41.0 32.0 41.0 32 37.407030368633954 39.0 35.0 41.0 33.0 41.0 33 37.30561297827699 39.0 35.0 41.0 32.0 41.0 34 37.198117643751075 39.0 35.0 41.0 32.0 41.0 35 37.21503003124374 39.0 35.0 41.0 32.0 41.0 36 37.15695955183333 39.0 35.0 41.0 32.0 41.0 37 37.07879326765939 39.0 35.0 41.0 32.0 41.0 38 37.01039302445728 39.0 35.0 41.0 31.0 41.0 39 36.86197717695765 39.0 35.0 41.0 31.0 41.0 40 36.73354537371238 39.0 35.0 41.0 31.0 41.0 41 36.66456102369815 39.0 35.0 41.0 31.0 41.0 42 36.706689815384294 39.0 35.0 41.0 31.0 41.0 43 36.6828208633675 39.0 35.0 41.0 31.0 41.0 44 36.59136773073449 39.0 35.0 41.0 31.0 41.0 45 36.57579857804082 39.0 35.0 40.0 31.0 41.0 46 36.51621476293066 39.0 35.0 40.0 31.0 41.0 47 36.41332761644355 39.0 35.0 40.0 31.0 41.0 48 36.3737032442178 39.0 35.0 40.0 31.0 41.0 49 36.35573721519521 39.0 35.0 40.0 31.0 41.0 50 36.22589118462625 39.0 35.0 40.0 30.0 41.0 51 35.202177572688264 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 7.0 10 7.0 11 6.0 12 4.0 13 1.0 14 9.0 15 27.0 16 67.0 17 115.0 18 241.0 19 407.0 20 760.0 21 1202.0 22 2066.0 23 3382.0 24 5334.0 25 8042.0 26 10368.0 27 12071.0 28 14197.0 29 17187.0 30 22518.0 31 30890.0 32 44180.0 33 68971.0 34 98206.0 35 106086.0 36 137766.0 37 230250.0 38 312280.0 39 295902.0 40 136.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.502110446093127 4.1222055479603705 58.0881923967709 14.287491609175609 2 21.060389334251784 3.749037910711085 54.494072827084 20.69649992795313 3 20.072398317266295 3.867967961987369 54.48535691316068 21.574276807585658 4 18.4331036033978 4.146385180134745 53.32339906585084 24.097112150616613 5 17.16789029194797 7.30056196557917 52.49559811202058 23.03594963045228 6 15.387805452366477 30.7226828145373 40.99628519313833 12.893226539957897 7 83.85510495998763 1.1728527397139916 10.53768051255197 4.4343617877464085 8 86.08230212590982 1.2588872448925799 8.037337850613453 4.621472778584156 9 81.06741829709317 4.185044475762379 10.115310135412969 4.63222709173148 10 37.3715896350914 36.06841992429807 15.552494051740196 11.00749638887034 11 26.085254290303194 22.674590650776523 32.288946604483776 18.951208454436504 12 26.29457680371973 19.997891311147583 33.559009900294164 20.148521984838528 13 26.36268745365278 21.667762013376116 34.435662145872065 17.533888387099044 14 20.120476423101387 24.469576891581763 35.906121172290426 19.503825513026428 15 17.016697301229716 25.0243026390241 38.25224838948889 19.706751670257294 16 23.04937494947933 25.660775224311777 31.034206447667618 20.25564337854128 17 23.607685467970775 24.473231952259283 29.272326621845313 22.64675595792463 18 22.824729297068572 23.789595026305893 32.49363000242499 20.892045674200542 19 22.494227464266512 26.044345726566316 30.79494055254677 20.666486256620402 20 20.34048296003683 31.856876258623657 29.898255762870914 17.9043850184686 21 20.975690332013063 27.33640967607025 34.233087436783265 17.45481255513343 22 19.79377023023368 23.09499291831994 35.109739682361166 22.001497169085216 23 18.461008585878112 25.94080910391267 32.4804858419116 23.117696468297623 24 19.721442202595796 28.318918102039454 29.556296720637388 22.403342974727362 25 21.630719379202002 27.11809009021674 27.291213445000125 23.959977085581137 26 17.97158190323227 27.044988876666302 27.157171123614855 27.826258096486573 27 18.196508714156685 25.48983084800922 31.917465918316424 24.39619451951767 28 16.08001771298636 25.091288654902527 30.522357373557746 28.306336258553372 29 18.889986188088017 25.18821805248527 28.81804475340641 27.103751006020303 30 22.588696724854763 24.695979784702867 29.0864105546906 23.628912935751764 31 20.718149133504607 27.045410614436786 28.19752791376868 24.038912338289922 32 22.64991899120325 27.35356034540323 25.682424429863254 24.31409623353026 33 22.522273026003646 27.24580634504476 25.470290331310164 24.76163029764143 34 17.985077511887734 26.18464382488042 29.386687847274693 26.44359081595715 35 17.543377486934915 27.933379490189324 26.435507508689554 28.087735514186203 36 20.25255063489107 27.682867254522257 25.01439180141774 27.050190309168933 37 17.81181357784752 29.109114104668286 27.1153487947086 25.963723522775595 38 21.358065910584564 26.867085827150778 27.356442220168205 24.418406042096457 39 20.264499871721426 27.931903407992632 26.94616165911639 24.85743506116955 40 20.815781427371487 27.95341203428728 29.193531948393353 22.03727458994788 41 18.07617287031212 26.764462969666507 28.151699076042835 27.007665083978534 42 17.62610837957805 25.748988707971193 30.900515574424414 25.72438733802634 43 18.566724187012586 25.183157199239464 29.942678808028482 26.30743980571947 44 20.550367790480674 23.874153449287792 27.252272990858835 28.3232057693727 45 19.95023494308297 23.057809704888996 25.33955162246035 31.652403729567684 46 20.5266801857052 23.755574846153575 28.2269792680741 27.490765700067126 47 16.010009243086138 25.71250839082439 31.665758758966323 26.61172360712315 48 16.865012283112566 28.220723491145268 28.900424197907476 26.013840027834696 49 21.349349996661243 24.065411528201956 29.749733778032383 24.83550469710442 50 19.615445442947667 24.80724826648204 27.459767973936604 28.117538316633688 51 17.351838249507093 25.16368697216882 25.560120476423105 31.92435430190098 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 129.0 1 440.0 2 751.0 3 6135.5 4 11520.0 5 7034.0 6 2548.0 7 2566.5 8 2585.0 9 3101.0 10 3617.0 11 4053.0 12 4489.0 13 4619.5 14 4750.0 15 4737.5 16 4725.0 17 4545.0 18 4365.0 19 4534.5 20 4704.0 21 4914.5 22 5125.0 23 5663.0 24 6201.0 25 7171.5 26 9396.5 27 10651.0 28 12573.0 29 14495.0 30 16883.5 31 19272.0 32 23233.5 33 27195.0 34 31214.5 35 35234.0 36 38196.0 37 41158.0 38 46008.0 39 50858.0 40 58145.5 41 65433.0 42 75463.0 43 85493.0 44 98715.0 45 111937.0 46 133713.0 47 155489.0 48 178132.0 49 200775.0 50 187255.0 51 173735.0 52 145916.0 53 118097.0 54 100866.0 55 83635.0 56 73661.5 57 63688.0 58 53433.0 59 43178.0 60 33897.0 61 24616.0 62 19023.5 63 13431.0 64 11068.5 65 8706.0 66 6742.0 67 4778.0 68 3822.0 69 2866.0 70 2245.0 71 1624.0 72 1361.5 73 1099.0 74 925.0 75 567.5 76 384.0 77 308.0 78 232.0 79 189.0 80 146.0 81 100.5 82 55.0 83 33.0 84 11.0 85 8.0 86 5.0 87 4.5 88 4.0 89 3.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1422685.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.00126252313578 #Duplication Level Percentage of deduplicated Percentage of total 1 70.46008767624173 26.071122015117844 2 12.862649604195006 9.518685494958559 3 5.022406878380495 5.575061862148787 4 2.5669424489554986 3.799204457423339 5 1.5542059011057274 2.875379028090991 6 1.0720791583343952 2.380096942986804 7 0.7820155513390636 2.0254893898590023 8 0.6205800166079175 1.8369795288897213 9 0.5063851047760548 1.6863199379661982 >10 4.313676793908406 30.67395530191353 >50 0.14777427760996728 3.7398211561770096 >100 0.08323984123362153 5.541470813716716 >500 0.004692440722557162 1.1952278766122462 >1k 0.0030602874277546703 2.589672980937479 >5k 2.0401916185031136E-4 0.4915132132016885 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6511 0.4576557706027687 No Hit CTGTCTCTTATACACATCTGACGCCCCGAATATCGTATGCCGTCTTCTGCT 4876 0.3427322281460759 RNA PCR Primer, Index 46 (96% over 27bp) CCTGTCTCTTATACACATCTGACGCCCCGAATATCGTATGCCGTCTTCTGC 4176 0.2935294882563603 RNA PCR Primer, Index 46 (96% over 26bp) TCTGTCTCTTATACACATCTGACGCCCCGAATATCGTATGCCGTCTTCTGC 4075 0.2864302357865585 RNA PCR Primer, Index 40 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCCCCGAATATCGTATGCCGTCTTCTGC 3302 0.23209635302262974 RNA PCR Primer, Index 40 (95% over 23bp) CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2387 0.1677813430239301 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 2093 0.14711619227024958 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1978 0.13903288500265343 No Hit CGCTGTCTCTTATACACATCTGACGCCCCGAATATCGTATGCCGTCTTCTG 1855 0.13038726070774628 RNA PCR Primer, Index 46 (96% over 25bp) TCCTGTCTCTTATACACATCTGACGCCCCGAATATCGTATGCCGTCTTCTG 1617 0.11365832914524297 RNA PCR Primer, Index 46 (96% over 25bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCCGAATATCGTATGCC 1507 0.10592647001971625 No Hit TCTGTATCTTATACACATCTGACGCCCCGAATATCGTATGCCGTCTTCTGC 1449 0.10184967157171124 TruSeq Adapter, Index 8 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.02896284138794E-5 0.0 0.0 0.3646625922112063 0.0 2 7.02896284138794E-5 0.0 0.0 1.258254638236855 0.0 3 7.02896284138794E-5 0.0 0.0 1.8430643466403316 0.0 4 7.02896284138794E-5 0.0 0.0 2.5377367442547016 0.0 5 7.02896284138794E-5 0.0 0.0 3.7205706112034638 0.0 6 7.02896284138794E-5 0.0 0.0 4.593427216847018 0.0 7 7.02896284138794E-5 0.0 0.0 5.666117236071232 0.0 8 7.02896284138794E-5 0.0 0.0 7.405644960057919 0.0 9 7.02896284138794E-5 0.0 0.0 8.216084375669949 0.0 10 7.02896284138794E-5 0.0 0.0 9.65146887750978 0.0 11 7.02896284138794E-5 0.0 0.0 12.605320221974647 0.0 12 7.02896284138794E-5 0.0 0.0 15.50350218073572 0.0 13 7.02896284138794E-5 0.0 0.0 16.369821850936784 0.0 14 7.02896284138794E-5 0.0 0.0 16.6960360164056 0.0 15 7.02896284138794E-5 0.0 0.0 17.044250835567958 0.0 16 7.02896284138794E-5 0.0 0.0 17.815679507410284 0.0 17 7.02896284138794E-5 0.0 0.0 19.044904529112205 0.0 18 7.02896284138794E-5 0.0 0.0 20.407047238144777 0.0 19 7.02896284138794E-5 0.0 0.0 21.441429409883426 0.0 20 7.02896284138794E-5 0.0 0.0 22.525998376309584 0.0 21 7.02896284138794E-5 0.0 0.0 23.9638430151439 0.0 22 7.02896284138794E-5 0.0 0.0 25.67876936918573 0.0 23 7.02896284138794E-5 0.0 0.0 27.21832310033493 0.0 24 1.405792568277588E-4 0.0 0.0 28.308093499263716 0.0 25 1.405792568277588E-4 0.0 0.0 29.21792244945297 0.0 26 1.405792568277588E-4 0.0 0.0 30.024285066616994 0.0 27 1.405792568277588E-4 0.0 0.0 30.957169014926002 0.0 28 1.405792568277588E-4 0.0 0.0 31.8621479807547 0.0 29 1.405792568277588E-4 0.0 0.0 32.8704527003518 0.0 30 1.405792568277588E-4 0.0 0.0 34.1532384189051 0.0 31 1.405792568277588E-4 0.0 0.0 35.102429561006126 0.0 32 1.405792568277588E-4 0.0 0.0 35.95651883586317 0.0 33 1.405792568277588E-4 0.0 0.0 36.77939951570446 0.0 34 1.405792568277588E-4 0.0 0.0 37.71572765580575 0.0 35 1.405792568277588E-4 0.0 0.0 38.760653271806476 0.0 36 1.405792568277588E-4 0.0 0.0 39.65354242154799 0.0 37 2.1086888524163817E-4 0.0 0.0 40.558802545890345 0.0 38 2.1086888524163817E-4 0.0 0.0 41.63690486650243 0.0 39 2.1086888524163817E-4 0.0 0.0 43.750654572164606 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGACA 35 1.2121927E-7 45.000004 29 ACACGAT 20 7.033854E-4 45.0 44 TCGATAG 40 6.8175723E-9 45.0 1 GCGATCG 25 3.891276E-5 45.0 9 CGTCGTA 20 7.033854E-4 45.0 18 ATTGCGA 20 7.033854E-4 45.0 13 TACGTAC 90 0.0 45.0 24 CGTTTAT 920 0.0 43.04348 1 CGTTTTT 2650 0.0 42.962265 1 TTAGGGA 5140 0.0 42.723736 4 TAGGGAC 2185 0.0 42.322655 5 TTCTTCG 300 0.0 42.0 1 TAGGGAT 3265 0.0 41.761105 5 CTTTAGG 1620 0.0 41.666664 2 TAGGGAA 1980 0.0 41.590908 5 TCGTTAG 190 0.0 41.44737 1 TGTAGGG 1885 0.0 41.419098 3 GTAGGGA 1485 0.0 41.21212 4 GTTAGGG 2020 0.0 41.101486 3 TTTAGGG 6170 0.0 41.098057 3 >>END_MODULE