##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934221.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 76127 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.3221984315683 33.0 31.0 34.0 31.0 34.0 2 32.49477846230641 34.0 31.0 34.0 31.0 34.0 3 32.559315354604806 34.0 31.0 34.0 31.0 34.0 4 36.02855754200218 37.0 35.0 37.0 35.0 37.0 5 35.14261694274042 37.0 35.0 37.0 35.0 37.0 6 26.216979521063486 37.0 0.0 37.0 0.0 37.0 7 31.087170123609233 37.0 19.0 37.0 17.0 37.0 8 34.673243395904215 37.0 32.0 37.0 32.0 37.0 9 37.1431029726641 39.0 37.0 39.0 34.0 39.0 10 37.29675410826645 39.0 37.0 39.0 34.0 39.0 11 37.370880239599614 39.0 37.0 39.0 35.0 39.0 12 37.03114532294718 39.0 37.0 39.0 34.0 39.0 13 36.98871622420429 39.0 37.0 39.0 33.0 39.0 14 37.95641493819539 40.0 37.0 41.0 33.0 41.0 15 38.154518107898646 40.0 37.0 41.0 33.0 41.0 16 38.28917466864581 40.0 37.0 41.0 33.0 41.0 17 38.31674701485675 40.0 37.0 41.0 34.0 41.0 18 38.31770593876023 40.0 37.0 41.0 34.0 41.0 19 38.30761753385789 40.0 37.0 41.0 34.0 41.0 20 38.212237445321634 40.0 37.0 41.0 34.0 41.0 21 38.10908087800649 40.0 37.0 41.0 34.0 41.0 22 38.141710562612474 40.0 37.0 41.0 34.0 41.0 23 38.081928881999815 40.0 36.0 41.0 34.0 41.0 24 38.01800937906393 40.0 36.0 41.0 34.0 41.0 25 37.887017746660185 40.0 36.0 41.0 34.0 41.0 26 37.78943081955154 40.0 36.0 41.0 34.0 41.0 27 37.76361868982096 40.0 36.0 41.0 33.0 41.0 28 37.679062619044494 40.0 36.0 41.0 33.0 41.0 29 37.65570691082008 40.0 36.0 41.0 33.0 41.0 30 37.36511356023487 40.0 35.0 41.0 33.0 41.0 31 37.3504275749734 40.0 35.0 41.0 33.0 41.0 32 37.28481353527658 39.0 35.0 41.0 33.0 41.0 33 37.22717301351689 39.0 35.0 41.0 32.0 41.0 34 37.11932691423542 39.0 35.0 41.0 32.0 41.0 35 37.078671167916774 39.0 35.0 41.0 32.0 41.0 36 37.02091242266213 39.0 35.0 41.0 32.0 41.0 37 36.89141828786107 39.0 35.0 41.0 31.0 41.0 38 36.81111826290278 39.0 35.0 41.0 31.0 41.0 39 36.74602966096129 39.0 35.0 41.0 31.0 41.0 40 36.54699383924232 39.0 35.0 41.0 31.0 41.0 41 36.417184441788066 39.0 35.0 41.0 31.0 41.0 42 36.45552826198327 39.0 35.0 41.0 31.0 41.0 43 36.42322697597436 39.0 35.0 40.0 31.0 41.0 44 36.30558146255599 38.0 35.0 40.0 30.0 41.0 45 36.24159627990069 38.0 35.0 40.0 30.0 41.0 46 36.15411089363826 38.0 35.0 40.0 30.0 41.0 47 36.031368633993196 38.0 35.0 40.0 30.0 41.0 48 36.01071893020873 38.0 35.0 40.0 30.0 41.0 49 35.97152127366112 38.0 35.0 40.0 30.0 41.0 50 35.82370249714293 38.0 35.0 40.0 30.0 41.0 51 34.78878715830126 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 4.0 12 0.0 13 1.0 14 2.0 15 2.0 16 7.0 17 11.0 18 27.0 19 28.0 20 62.0 21 114.0 22 144.0 23 202.0 24 313.0 25 432.0 26 587.0 27 636.0 28 818.0 29 984.0 30 1155.0 31 1628.0 32 2297.0 33 3695.0 34 5514.0 35 6062.0 36 7408.0 37 11964.0 38 15964.0 39 16057.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.795407674018417 4.5581725274869624 53.08234923220409 17.56407056629054 2 21.641467547650635 4.546350177992039 51.73854217294783 22.073640101409488 3 22.04868180803132 4.392659634558041 50.175364850841355 23.383293706569287 4 20.250371090414703 4.853731264860037 49.65780866184139 25.238088982883866 5 18.310192178859012 8.114072536682123 48.24306750561561 25.33266777884325 6 16.85604319098349 30.895740013398665 38.91917453728638 13.329042258331473 7 82.6290278087932 2.5785857842815294 9.731107228709918 5.061279178215351 8 83.83096667411036 2.9069843813627227 8.136403641283644 5.125645303243265 9 78.29416632732145 5.266199902794015 10.139635083478924 6.299998686405611 10 43.07932796511093 23.61579991330277 17.084608614552 16.2202635070343 11 31.43694090138847 24.25420678602861 24.0256413624601 20.28321095012282 12 29.195948874906406 19.610650623300536 30.77751651844943 20.415883983343626 13 27.439673177716184 21.123911358650677 30.66586099544183 20.770554468191314 14 20.43427430478017 24.237130058980387 33.160376738870575 22.16821889736887 15 18.597869349902137 23.20333127536879 35.04669828050495 23.152101094224125 16 23.89034114046265 22.391529943384082 30.149618400830192 23.56851051532308 17 24.77964454135852 22.20894032340694 27.51586165223902 25.49555348299552 18 25.138255809371184 22.315341468861245 29.153913854480013 23.392488867287557 19 26.13396035572136 24.315945722279874 27.023263756617233 22.526830165381533 20 25.98683778422898 27.409460506784715 26.83016538153349 19.77353632745281 21 26.472867707909153 24.3120049391149 28.761149132370907 20.45397822060504 22 23.619740696467744 22.365258055617588 30.108896974792128 23.906104273122544 23 24.472263454490523 22.953748341587087 28.834710418117094 23.7392777858053 24 24.92019914090927 24.283105862571755 26.81965662642689 23.97703837009208 25 24.04140449512 24.55370630656666 26.097179712848266 25.30770948546508 26 22.05130899680797 25.08833922261484 25.951370735744216 26.908981044832974 27 22.253602532609982 23.85224690320123 29.791007132817526 24.10314343137126 28 19.33873658491731 23.941571321607313 29.562441709249015 27.157250384226362 29 21.02013740197302 24.078185137993092 27.954602177939496 26.947075282094396 30 24.800662051571713 22.790862637434813 28.600890616995283 23.807584693998187 31 24.486712992762094 25.25122492676711 27.200598999041077 23.061463081429718 32 25.473222378394 24.049286061449944 25.478476755947298 24.999014804208755 33 25.830520052018336 23.15866906616575 26.374348128784792 24.636462753031118 34 22.08020807335111 23.341258686142893 29.54930576536577 25.029227475140225 35 21.825370762016107 23.86932363024945 27.24526120824412 27.060044399490323 36 24.87685052609455 23.952080076713912 26.658084516662946 24.51298488052859 37 22.798744203764763 25.919844470424426 28.10435193820852 23.1770593876023 38 23.678852443942358 24.58129178872148 26.476808491074127 25.263047276262036 39 24.185899877835723 23.230916757523612 25.14482378131281 27.43835958332786 40 25.74119563361225 23.688047604660632 26.298159654261955 24.272597107465156 41 20.33969550882079 23.93763053844234 26.786816766718776 28.935857186018097 42 21.05954523362276 22.838152035414506 29.391674438766795 26.71062829219594 43 21.533752807808003 21.47464106033339 30.04453084976421 26.947075282094396 44 23.1455331222825 21.556083912409527 27.70764643293444 27.590736532373533 45 23.752413729688545 21.47464106033339 25.529706937091966 29.243238272886096 46 23.353081035637814 22.254916126998307 28.510252604200875 25.881750233163004 47 20.01655128929289 23.941571321607313 30.79984762305095 25.24202976604884 48 20.761359307473036 23.694615576602256 29.79888869914748 25.745136416777225 49 23.536984250003286 21.054290856069464 30.0918202477439 25.316904646183353 50 22.826329685919582 21.109461820379103 28.076766456053697 27.987442037647615 51 21.65328989714556 22.62797693328254 26.059085475586848 29.659647693985054 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 13.0 1 53.0 2 93.0 3 225.0 4 357.0 5 255.5 6 154.0 7 161.0 8 168.0 9 173.5 10 179.0 11 157.0 12 135.0 13 162.0 14 189.0 15 171.0 16 153.0 17 166.0 18 179.0 19 189.0 20 199.0 21 195.5 22 192.0 23 233.5 24 275.0 25 327.5 26 422.5 27 465.0 28 543.0 29 621.0 30 722.0 31 823.0 32 989.0 33 1155.0 34 1257.5 35 1360.0 36 1521.5 37 1683.0 38 1847.0 39 2011.0 40 2284.0 41 2557.0 42 2943.0 43 3329.0 44 3980.0 45 4631.0 46 5396.0 47 6161.0 48 6937.5 49 7714.0 50 7449.5 51 7185.0 52 6462.0 53 5739.0 54 5438.0 55 5137.0 56 5170.0 57 5203.0 58 4997.5 59 4792.0 60 4199.5 61 3607.0 62 3201.5 63 2796.0 64 2394.0 65 1992.0 66 1808.5 67 1625.0 68 1359.0 69 1093.0 70 937.0 71 781.0 72 635.0 73 489.0 74 372.0 75 199.0 76 143.0 77 106.0 78 69.0 79 48.5 80 28.0 81 19.5 82 11.0 83 6.5 84 2.0 85 2.5 86 3.0 87 1.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 76127.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.98184612555336 #Duplication Level Percentage of deduplicated Percentage of total 1 75.58232132191918 49.87061095275001 2 13.545689826796735 17.875392436323512 3 5.6997810073661155 11.282462201321476 4 2.6518017121242283 6.99883090099439 5 1.2104320127413895 3.99332694050731 6 0.5454907425841131 2.159549174405927 7 0.25084610790364326 1.15859025050245 8 0.11347800119450527 0.5989990410760965 9 0.06768863229145929 0.40195988282738054 >10 0.300617161059128 3.2485189223271633 >50 0.019908421262193908 0.8840490233425723 >100 0.011945052757316344 1.527710273621711 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTCTGCT 289 0.3796287782258594 RNA PCR Primer, Index 21 (96% over 27bp) CCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTCTGC 255 0.33496656902281713 RNA PCR Primer, Index 21 (96% over 26bp) TCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTCTGC 187 0.24564215061673259 TruSeq Adapter, Index 21 (96% over 25bp) GCTGTCTCTTATACACATCTGACGCCTTCGATCTCGTATGCCGTCTTCTGC 165 0.21674307407358756 TruSeq Adapter, Index 21 (96% over 25bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 141 0.185216808753793 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 126 0.1655128929289214 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.40195988282738054 0.0 2 0.0 0.0 0.0 1.2807545286166537 0.0 3 0.0 0.0 0.0 1.7969971232282895 0.0 4 0.0 0.0 0.0 2.489261365875445 0.0 5 0.0 0.0 0.0 3.496788261720546 0.0 6 0.0 0.0 0.0 4.066888226253497 0.0 7 0.0 0.0 0.0 4.7630932520656275 0.0 8 0.0 0.0 0.0 5.771933742299053 0.0 9 0.0 0.0 0.0 6.25533647720257 0.0 10 0.0 0.0 0.0 7.1814205209715345 0.0 11 0.0 0.0 0.0 9.00206234318967 0.0 12 0.0 0.0 0.0 10.548162938247927 0.0 13 0.0 0.0 0.0 11.061778344082914 0.0 14 0.0 0.0 0.0 11.261444691108279 0.0 15 0.0 0.0 0.0 11.526790757549884 0.0 16 0.0 0.0 0.0 12.137612148120903 0.0 17 0.0 0.0 0.0 13.13331669447108 0.0 18 0.0 0.0 0.0 14.290593350585207 0.0 19 0.0 0.0 0.0 14.876456447778056 0.0 20 0.0 0.0 0.0 15.567407096036886 0.0 21 0.0 0.0 0.0 16.211068346316026 0.0 22 0.0 0.0 0.0 16.887569456303282 0.0 23 0.0 0.0 0.0 17.497077252485976 0.0 24 0.0 0.0 0.0 17.98442077055447 0.0 25 0.0 0.0 0.0 18.453373967186412 0.0 26 0.0 0.0 0.0 18.838257122965572 0.0 27 0.0 0.0 0.0 19.263861704782798 0.0 28 0.0 0.0 0.0 19.63823610545536 0.0 29 0.0 0.0 0.0 20.125579623523848 0.0 30 0.0 0.0 0.0 20.62080470792229 0.0 31 0.0 0.0 0.0 20.999119891759822 0.0 32 0.0 0.0 0.0 21.424724473577047 0.0 33 0.0 0.0 0.0 21.809607629356208 0.0 34 0.0 0.0 0.0 22.249661749445007 0.0 35 0.0 0.0 0.0 22.681834303203857 0.0 36 0.0 0.0 0.0 23.054895109488093 0.0 37 0.0 0.0 0.0 23.473931719363694 0.0 38 0.0 0.0 0.0 23.90479067873422 0.0 39 0.0 0.0 0.0 24.5931141382164 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTCAGG 30 2.1387987E-6 45.000004 2 TTGCTAG 30 2.1387987E-6 45.000004 1 TAGGGCG 30 2.1387987E-6 45.000004 5 TAGGGAG 35 1.1920565E-7 45.000004 5 CTAGGGA 85 0.0 45.000004 4 GGGTGAG 20 6.9917954E-4 45.0 7 CTTTTAG 20 6.9917954E-4 45.0 1 TATGGGA 40 6.672053E-9 45.0 4 TCTTAGG 80 0.0 45.0 2 GTTAGGG 40 6.672053E-9 45.0 3 CAACATA 20 6.9917954E-4 45.0 20 TTTTTAG 55 1.8189894E-12 45.0 1 ATTTTGC 20 6.9917954E-4 45.0 33 GTGCTAG 20 6.9917954E-4 45.0 1 TGTCTCG 20 6.9917954E-4 45.0 1 GGGAATC 25 3.8564554E-5 45.0 7 CGAGGGT 20 6.9917954E-4 45.0 4 TAGGGTT 20 6.9917954E-4 45.0 5 CGGGAAT 20 6.9917954E-4 45.0 6 GCGATGG 20 6.9917954E-4 45.0 9 >>END_MODULE