##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934217.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 536830 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19131568653019 33.0 31.0 34.0 30.0 34.0 2 32.407367322988655 34.0 31.0 34.0 31.0 34.0 3 32.284548180988395 33.0 31.0 34.0 30.0 34.0 4 35.935702177598124 37.0 35.0 37.0 35.0 37.0 5 35.12464094778608 37.0 35.0 37.0 35.0 37.0 6 25.94729802730846 36.0 0.0 37.0 0.0 37.0 7 31.040683270309035 37.0 19.0 37.0 17.0 37.0 8 34.777160367341615 37.0 32.0 37.0 32.0 37.0 9 37.365855112419204 39.0 37.0 39.0 35.0 39.0 10 37.36921371756422 39.0 37.0 39.0 34.0 39.0 11 37.39297356705102 39.0 37.0 39.0 34.0 39.0 12 37.29029860477246 39.0 37.0 39.0 34.0 39.0 13 37.371814168358696 39.0 37.0 39.0 34.0 39.0 14 38.58788256990108 40.0 38.0 41.0 34.0 41.0 15 38.68765158430043 40.0 38.0 41.0 35.0 41.0 16 38.71865022446585 40.0 38.0 41.0 35.0 41.0 17 38.717538140565914 40.0 38.0 41.0 35.0 41.0 18 38.569301268558014 40.0 38.0 41.0 35.0 41.0 19 38.45496525902055 40.0 37.0 41.0 35.0 41.0 20 38.26179796211091 40.0 37.0 41.0 34.0 41.0 21 38.11667380735056 40.0 36.0 41.0 34.0 41.0 22 38.066082372445656 40.0 36.0 41.0 34.0 41.0 23 37.96163217405883 40.0 35.0 41.0 34.0 41.0 24 37.89073077138014 39.0 35.0 41.0 34.0 41.0 25 37.78087662761023 39.0 35.0 41.0 34.0 41.0 26 37.73880930648436 39.0 35.0 41.0 34.0 41.0 27 37.712473222435406 39.0 35.0 41.0 34.0 41.0 28 37.64908816571354 39.0 35.0 41.0 33.0 41.0 29 37.60994914591211 39.0 35.0 41.0 33.0 41.0 30 37.303623120913514 39.0 35.0 41.0 33.0 41.0 31 37.19283758359257 39.0 35.0 41.0 33.0 41.0 32 36.86624257213643 39.0 35.0 41.0 32.0 41.0 33 36.427319635638845 39.0 35.0 41.0 30.0 41.0 34 36.090363802321036 39.0 35.0 41.0 29.0 41.0 35 35.87536650336233 39.0 35.0 41.0 27.0 41.0 36 35.7036119441909 39.0 35.0 41.0 25.0 41.0 37 35.57870648063633 39.0 35.0 41.0 24.0 41.0 38 35.47080081217518 39.0 35.0 41.0 24.0 41.0 39 35.36297151798521 39.0 35.0 41.0 23.0 41.0 40 35.319659855075166 39.0 35.0 41.0 23.0 41.0 41 35.21310657005011 39.0 35.0 41.0 23.0 41.0 42 35.10988394836354 39.0 35.0 40.0 22.0 41.0 43 35.02332582009202 39.0 35.0 40.0 22.0 41.0 44 34.918611105936705 39.0 35.0 40.0 21.0 41.0 45 34.90065011269862 39.0 35.0 40.0 21.0 41.0 46 34.82281727921316 39.0 35.0 40.0 21.0 41.0 47 34.71545927016001 38.0 35.0 40.0 20.0 41.0 48 34.63204552651678 38.0 34.0 40.0 20.0 41.0 49 34.58819924370844 38.0 34.0 40.0 20.0 41.0 50 34.49946538010171 38.0 34.0 40.0 20.0 41.0 51 33.54198722128048 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 1.0 12 0.0 13 6.0 14 6.0 15 11.0 16 21.0 17 48.0 18 127.0 19 239.0 20 498.0 21 846.0 22 1443.0 23 2670.0 24 4877.0 25 8369.0 26 11107.0 27 10849.0 28 9241.0 29 8568.0 30 8919.0 31 10593.0 32 13601.0 33 19593.0 34 29176.0 35 41680.0 36 50561.0 37 81620.0 38 111133.0 39 110975.0 40 47.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.271035523350037 3.79244826108824 53.09390309781495 22.842613117746772 2 30.00502952517557 3.532589460350576 47.89672708306168 18.56565393141218 3 16.809604530298234 3.406851330961384 59.6790417823147 20.104502356425684 4 14.69254698880465 3.533148296481195 60.39695993144944 21.37734478326472 5 14.639084998975468 6.80140826704916 57.718830914814745 20.84067581916063 6 12.85304472551832 30.442225658029543 44.93750349272582 11.767226123726319 7 74.03181640370322 0.9135107948512565 20.030549708473817 5.0241230929717045 8 76.0829312817838 0.9310209936106403 18.227185514967495 4.75886220963806 9 71.9708287539817 2.705139429614589 19.968332619264945 5.355699197138759 10 33.50408881768902 23.49551999701954 27.954473483225602 15.04591770206583 11 21.213419518283256 23.502598588007377 35.31024719184844 19.973734701860923 12 19.556284112288807 19.801799452340592 39.778328334854606 20.863588100515994 13 19.065625989605646 21.60013412067135 41.36896224130544 17.965277648417562 14 17.516532235530804 24.111729970381685 39.9698228489466 18.40191494514092 15 15.307453011195351 24.994504778048917 40.9237561239126 18.774286086843134 16 16.548441778589126 25.049829554980164 39.03936069146658 19.362367974964144 17 16.91131270607082 25.51683028146713 35.59208688039044 21.979770132071604 18 17.472943017342548 24.46640463461431 37.95242441741333 20.10822793062981 19 17.685859583108247 27.535718942682042 35.16886165080193 19.609559823407782 20 18.51200566287279 27.452824916640278 35.28863886146452 18.74653055902241 21 18.395954026414323 27.463815360542444 36.57526591285882 17.564964700184415 22 18.026749622785612 24.59177020658309 35.92571205036976 21.455768120261535 23 17.159622226775703 25.436544157368257 35.04088817689026 22.36294543896578 24 17.67393774565505 25.226421772255648 36.10360821861669 20.996032263472607 25 17.59719091705009 26.274239517165583 33.922098243391765 22.206471322392563 26 17.020099472831248 27.06871821619507 34.18773168414582 21.72345062682786 27 17.144347372538792 25.53843861185105 36.1695508820297 21.147663133580462 28 16.514539053331596 23.559227315910064 36.99867742115754 22.927556209600805 29 16.59724680066315 21.626026861390013 37.53795428720451 24.238772050742323 30 18.33019764171153 22.945811523201012 37.247918335413445 21.47607249967401 31 17.58042583313153 24.707821843041557 36.368682823240135 21.34306950058678 32 18.532868878415886 25.21952945997802 34.270066874056965 21.97753478754913 33 19.277424883110108 24.798725853622187 34.48335599724307 21.440493266024628 34 17.20488795335581 24.25050760948531 34.063483784438276 24.481120652720602 35 18.40340517482257 23.861371383864537 32.110537786636364 25.624685654676526 36 18.87003334388913 25.464485963899186 33.181267812901666 22.48421287931002 37 17.624015051319788 26.720004470689044 35.12862544939739 20.52735502859378 38 19.81949592981018 26.011400257064622 33.82560587150494 20.343497941620253 39 19.29363113089805 25.77259095058026 33.34649702885457 21.58728088966712 40 20.307359871840248 23.988599742935378 32.40057373842743 23.303466646796938 41 19.27872883408155 25.12713521971574 30.791498239666186 24.80263770653652 42 19.175902986047724 26.499823035225305 31.35368738706853 22.97058659165844 43 19.01141888493564 25.78004209898851 33.321163124266526 21.887375891809324 44 18.984222193245532 24.355009965910995 31.50084756813144 25.159920272712032 45 19.713689622413057 23.065588733863606 30.54914963768791 26.671572006035433 46 20.092207961552074 23.197287781979398 31.873404988543857 24.83709926792467 47 17.702624667026807 24.03964010953188 33.961030493824865 24.296704729616454 48 17.828549075126205 23.787232457202467 34.66330123130227 23.720917236369054 49 19.600059609187266 22.090419685934094 34.88981614291303 23.419704561965613 50 18.882327738762736 21.416463312408023 34.19182981577036 25.509379133058886 51 17.664437531434533 21.733137119758585 32.09414526013822 28.508280088668663 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 49.0 1 188.5 2 328.0 3 8925.5 4 17523.0 5 11178.5 6 4834.0 7 4876.5 8 4919.0 9 5203.0 10 5487.0 11 5818.5 12 6150.0 13 6180.5 14 6211.0 15 6007.0 16 5803.0 17 5472.5 18 5142.0 19 4835.5 20 4529.0 21 4313.0 22 4097.0 23 4055.0 24 4013.0 25 4136.5 26 4558.0 27 4856.0 28 5325.5 29 5795.0 30 6545.5 31 7296.0 32 8516.5 33 9737.0 34 10938.5 35 12140.0 36 13602.0 37 15064.0 38 16754.5 39 18445.0 40 21255.5 41 24066.0 42 27855.5 43 31645.0 44 37112.5 45 42580.0 46 52096.0 47 61612.0 48 66411.5 49 71211.0 50 64425.0 51 57639.0 52 46550.0 53 35461.0 54 29093.0 55 22725.0 56 18890.0 57 15055.0 58 12701.0 59 10347.0 60 8827.5 61 7308.0 62 5860.5 63 4413.0 64 3604.5 65 2796.0 66 2097.0 67 1398.0 68 1120.0 69 842.0 70 681.0 71 520.0 72 385.0 73 250.0 74 215.0 75 118.0 76 56.0 77 40.0 78 24.0 79 19.5 80 15.0 81 9.5 82 4.0 83 3.0 84 2.0 85 2.5 86 3.0 87 1.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 536830.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.06898330025747 #Duplication Level Percentage of deduplicated Percentage of total 1 79.79225478172386 43.9407834606464 2 9.697808384714415 10.6809689597387 3 3.582040860865164 5.917780450434707 4 1.9570349807036203 4.310877066815494 5 1.2467188393894757 3.43277694732277 6 0.8913222502268826 2.945052606773526 7 0.6108565699688397 2.3547475175326618 8 0.4294257374994289 1.8918431013645438 9 0.31801351133271233 1.5761412670353636 >10 1.3911278786590764 12.116912877986518 >50 0.05225239417123574 1.960311304201396 >100 0.02422296391305624 2.3854551074356003 >500 0.0031143810745357997 1.090776884083829 >1k 0.0034604234161508883 3.6067669610507744 >5k 3.4604234161508883E-4 1.788805487577726 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9387 1.7485982527056982 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3416 0.6363280740644152 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTT 2330 0.4340293947804706 No Hit CGTTCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTC 2263 0.42154872119665443 No Hit CTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGCT 2133 0.3973324888698471 Illumina Single End Adapter 2 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTG 1945 0.3623120913510795 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCT 1769 0.3295270383547864 No Hit CCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 1673 0.31164428217499024 No Hit TCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 1346 0.25073114393755935 No Hit GCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 1043 0.1942886947450776 No Hit CGTCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCT 1009 0.18795521859806644 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCC 852 0.15870946109569137 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTC 807 0.1503269191364119 No Hit CGTTCAGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTC 654 0.1218262764748617 No Hit CGTTTATGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTT 650 0.12108116163403684 No Hit TCCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTG 577 0.10748281578898347 No Hit CTGTCACTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGCT 575 0.10711025836857106 Illumina Single End Adapter 2 (95% over 21bp) CGTTTACTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCT 538 0.10021794609094126 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGT 537 0.10003166738073506 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.41875454054356126 0.0 2 0.0 0.0 0.0 1.2426652757856305 0.0 3 0.0 0.0 0.0 2.041242106439655 0.0 4 0.0 0.0 0.0 2.855838906171414 0.0 5 0.0 0.0 0.0 4.404932660246261 0.0 6 0.0 0.0 0.0 6.066352476575452 0.0 7 0.0 0.0 0.0 7.763165247843824 0.0 8 0.0 0.0 0.0 9.707914982396662 0.0 9 0.0 0.0 0.0 10.686064489689473 0.0 10 0.0 0.0 0.0 12.104763146619973 0.0 11 0.0 0.0 0.0 14.810647691075387 0.0 12 0.0 0.0 0.0 16.934224987426187 0.0 13 0.0 0.0 0.0 17.836186502244658 0.0 14 0.0 0.0 0.0 18.172978410297485 0.0 15 0.0 0.0 0.0 18.512378220293204 0.0 16 0.0 0.0 0.0 19.218374531974742 0.0 17 0.0 0.0 0.0 20.329154480934374 0.0 18 0.0 0.0 0.0 21.539220982433918 0.0 19 0.0 0.0 0.0 22.428888102378778 0.0 20 0.0 0.0 0.0 23.277387627368068 0.0 21 0.0 0.0 0.0 24.57984836912989 0.0 22 0.0 0.0 0.0 25.92291786971667 0.0 23 0.0 0.0 0.0 27.36266602090047 0.0 24 0.0 0.0 0.0 28.37937522120597 0.0 25 0.0 0.0 0.0 29.254512601754744 0.0 26 0.0 0.0 0.0 30.0 0.0 27 0.0 0.0 0.0 30.753497382784122 0.0 28 0.0 0.0 0.0 31.570329527038353 0.0 29 1.8627871020621053E-4 0.0 0.0 32.399456066166195 0.0 30 1.8627871020621053E-4 0.0 0.0 33.309613844233745 0.0 31 1.8627871020621053E-4 0.0 0.0 34.127004824618595 0.0 32 1.8627871020621053E-4 0.0 0.0 34.92632677011344 0.0 33 1.8627871020621053E-4 0.0 0.0 35.699383417469214 0.0 34 1.8627871020621053E-4 0.0 0.0 36.43872361827767 0.0 35 1.8627871020621053E-4 0.0 0.0 37.26300691094015 0.0 36 1.8627871020621053E-4 0.0 0.0 38.04854423187974 0.0 37 1.8627871020621053E-4 0.0 0.0 38.8001788275618 0.0 38 1.8627871020621053E-4 0.0 0.0 39.55758806326025 0.0 39 1.8627871020621053E-4 0.0 0.0 40.36529255071438 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAGTTG 20 7.029925E-4 45.0 45 GACACCG 20 7.029925E-4 45.0 32 ACACCGC 20 7.029925E-4 45.0 33 CAACCCG 20 7.029925E-4 45.0 23 GGATACG 25 3.8880185E-5 45.0 9 TTCTTCG 50 2.1827873E-11 45.0 1 CGAGGGT 50 2.1827873E-11 45.0 4 TCGTCAC 20 7.029925E-4 45.0 25 CGCAGTC 20 7.029925E-4 45.0 3 TAGGGCG 205 0.0 45.0 5 GCGATAC 20 7.029925E-4 45.0 9 ACGTCCG 20 7.029925E-4 45.0 14 ATACGTC 20 7.029925E-4 45.0 12 GGCGATA 45 3.8380676E-10 45.0 8 AGGGCGC 20 7.029925E-4 45.0 6 CGTTTAT 1850 0.0 45.0 1 TCGCGAG 25 3.8880185E-5 45.0 1 CGTTAGG 120 0.0 44.999996 2 CTTTGCG 60 0.0 44.999996 1 GTCGTAG 30 2.1633314E-6 44.999996 1 >>END_MODULE