##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934211.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 846879 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.41443819010744 33.0 31.0 34.0 31.0 34.0 2 32.5882516864865 34.0 31.0 34.0 31.0 34.0 3 32.660065959836054 34.0 31.0 34.0 31.0 34.0 4 36.089559429387194 37.0 35.0 37.0 35.0 37.0 5 35.18127028772705 37.0 35.0 37.0 35.0 37.0 6 26.136477584164915 37.0 0.0 37.0 0.0 37.0 7 31.120572124234986 37.0 19.0 37.0 17.0 37.0 8 34.791841573589615 37.0 32.0 37.0 32.0 37.0 9 37.31788012218983 39.0 37.0 39.0 35.0 39.0 10 37.41892053055986 39.0 37.0 39.0 35.0 39.0 11 37.42743768590318 39.0 37.0 39.0 35.0 39.0 12 36.992328301917986 39.0 35.0 39.0 34.0 39.0 13 36.91869912939156 39.0 35.0 39.0 33.0 39.0 14 37.71502776665852 40.0 37.0 41.0 33.0 41.0 15 37.992124022440045 40.0 37.0 41.0 33.0 41.0 16 38.216819640113876 40.0 37.0 41.0 33.0 41.0 17 38.24525463495966 40.0 37.0 41.0 34.0 41.0 18 38.250595421541924 40.0 37.0 41.0 34.0 41.0 19 38.25834859525387 40.0 37.0 41.0 34.0 41.0 20 38.1511727177082 40.0 36.0 41.0 34.0 41.0 21 38.061720741688006 40.0 36.0 41.0 34.0 41.0 22 38.11902881049123 40.0 36.0 41.0 34.0 41.0 23 38.08952046278158 40.0 36.0 41.0 34.0 41.0 24 38.04427314882055 40.0 36.0 41.0 34.0 41.0 25 37.92353571171324 40.0 35.0 41.0 34.0 41.0 26 37.86653347172383 40.0 35.0 41.0 34.0 41.0 27 37.814737406406344 40.0 35.0 41.0 34.0 41.0 28 37.73578634019736 40.0 35.0 41.0 34.0 41.0 29 37.68855763338092 40.0 35.0 41.0 33.0 41.0 30 37.4576486133202 40.0 35.0 41.0 33.0 41.0 31 37.42887590789239 40.0 35.0 41.0 33.0 41.0 32 37.398933023489775 39.0 35.0 41.0 33.0 41.0 33 37.34108060301413 39.0 35.0 41.0 33.0 41.0 34 37.212909990683436 39.0 35.0 41.0 32.0 41.0 35 37.174383825788574 39.0 35.0 41.0 32.0 41.0 36 37.07504023597232 39.0 35.0 41.0 32.0 41.0 37 36.98328096457699 39.0 35.0 41.0 32.0 41.0 38 36.90748265100445 39.0 35.0 41.0 32.0 41.0 39 36.869628364854954 39.0 35.0 41.0 32.0 41.0 40 36.74166557442091 39.0 35.0 41.0 31.0 41.0 41 36.614934364885656 39.0 35.0 41.0 31.0 41.0 42 36.61297304573617 39.0 35.0 41.0 31.0 41.0 43 36.558750423614235 39.0 35.0 41.0 31.0 41.0 44 36.44323923488479 38.0 35.0 41.0 31.0 41.0 45 36.39061188198078 38.0 35.0 40.0 31.0 41.0 46 36.35248601039818 38.0 35.0 40.0 31.0 41.0 47 36.255995248435724 38.0 35.0 40.0 31.0 41.0 48 36.18140844205607 38.0 35.0 40.0 31.0 41.0 49 36.14843560886502 38.0 35.0 40.0 31.0 41.0 50 36.0417969981544 38.0 35.0 40.0 31.0 41.0 51 35.03217106576028 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 8.0 10 15.0 11 10.0 12 11.0 13 17.0 14 12.0 15 36.0 16 50.0 17 119.0 18 186.0 19 365.0 20 591.0 21 982.0 22 1356.0 23 2079.0 24 2963.0 25 4200.0 26 5599.0 27 6697.0 28 8143.0 29 10014.0 30 13065.0 31 17732.0 32 25714.0 33 44199.0 34 64483.0 35 69603.0 36 78205.0 37 127749.0 38 173332.0 39 189223.0 40 118.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.72409990093036 4.55472387436694 53.24030941846474 16.480866806237962 2 21.042911679236347 4.526266444202773 51.976964832048026 22.453857044512855 3 22.688483242588376 4.213943196135457 50.86440920131447 22.233164359961695 4 19.416233015578378 5.194012367764462 50.219688999254906 25.170065617402248 5 18.284076001412245 8.701124954096159 48.535032749660814 24.479766294830785 6 17.07800051719313 31.265859703688488 38.66089488581013 12.995244893308252 7 86.9626003242494 2.1252150543347987 7.2518033863161095 3.6603812350997016 8 88.58809818167649 2.415221064638514 5.671884649400917 3.324796104284083 9 84.03620824226365 4.31289475828306 7.294076249381552 4.356820750071734 10 46.54950707243892 25.570949332785435 14.603384899141435 13.276158695634205 11 35.387109610699994 24.533020655843394 22.383953315644856 17.695916417811752 12 32.51161027726511 21.08648342915576 27.195738706474003 19.206167587105124 13 29.203227379590235 22.158655486793272 28.873900521798273 19.764216611818217 14 21.761432270725805 23.49190380207798 33.19317163372808 21.553492293468135 15 20.296287899451986 23.71861859840662 34.497844438225535 21.48724906391586 16 27.36423975562034 22.816482638015582 29.259551836803134 20.55972576956094 17 27.484445829923754 23.311122368130512 26.67866365797239 22.525768143973345 18 27.775042243342913 22.42787930743353 28.661001158370915 21.136077290852647 19 27.465907172098962 24.661256212516783 26.284746699351384 21.588089916032867 20 26.504730900164013 29.173234901325927 26.217440744191318 18.10459345431874 21 26.848227432726517 24.90698198916256 29.739785730901346 18.505004847209577 22 24.979719652984663 21.53070273321218 31.000296382363953 22.4892812314392 23 24.024447412204104 23.677998864064406 30.814909804116052 21.482643919615434 24 23.43652398984979 26.090976396864253 28.39921641698519 22.073283196300768 25 25.913265059117062 25.108663693396576 25.664823428140267 23.313247819346092 26 22.99383973389351 25.7178416279067 25.7353175601237 25.553001078076086 27 22.15995437364724 24.42001749954834 30.54993688590696 22.870091240897462 28 20.681348811341408 25.951759342243697 27.645743961061736 25.72114788535316 29 22.184278982003335 26.656228339585702 27.737138363331717 23.42235431507925 30 26.16217901258621 23.031153210789263 28.593813283833935 22.212854492790587 31 25.578152250793796 24.61012730271975 28.674226188156748 21.137494258329703 32 27.993137154186137 24.104387994034568 25.71642466042965 22.18605019134965 33 26.94481738241236 23.35457603742683 26.178592219195423 23.52201436096538 34 22.441104337219368 25.03120280465096 29.923755341672187 22.60393751645749 35 23.52307708657317 27.147679892877257 26.72282581100724 22.606417209542332 36 26.884596264637565 26.38133664903723 25.31010923638442 21.423957849940784 37 24.047355053083145 27.853211615827057 26.487136887323924 21.612296443765874 38 25.20360051435919 26.013987830610986 26.41876820655607 22.36364344847375 39 23.313247819346092 24.693019900127407 25.72882312585387 26.264909154672626 40 25.461488595183017 24.051724036137394 27.42375238965661 23.06303497902298 41 22.625428189859473 23.60313574902672 27.43556045196539 26.335875609148413 42 23.433453893649506 22.9871091383775 29.86849361006708 23.71094335790591 43 23.13896081966845 22.662741666755227 29.561602070661806 24.636695442914515 44 24.222704778368577 23.2394474299162 27.499560149679 25.038287642036227 45 22.882843948190946 23.32422931729326 25.72008515974537 28.072841574770425 46 22.567686765169523 23.768566701972773 28.191040278481346 25.472706254376366 47 21.23243107929232 25.06225800852306 30.858953876527817 22.846357035656805 48 22.245090502893568 26.40861327297052 28.583540269625296 22.76275595451062 49 25.105475516573208 23.726057677661153 28.449046439928257 22.719420365837387 50 22.366713544674035 25.358876533719695 26.415461949109613 25.858947972496658 51 21.692827428711777 24.95008141658962 25.52383516417339 27.833255990525213 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 128.0 1 569.0 2 1010.0 3 1937.0 4 2864.0 5 2037.0 6 1210.0 7 1178.0 8 1146.0 9 1213.5 10 1281.0 11 1299.0 12 1317.0 13 1347.5 14 1378.0 15 1374.0 16 1370.0 17 1351.0 18 1332.0 19 1445.5 20 1559.0 21 1606.5 22 1654.0 23 2018.5 24 2383.0 25 3436.0 26 5418.0 27 6347.0 28 7781.0 29 9215.0 30 10767.0 31 12319.0 32 14842.5 33 17366.0 34 19254.0 35 21142.0 36 22522.5 37 23903.0 38 26502.0 39 29101.0 40 32201.5 41 35302.0 42 39221.0 43 43140.0 44 46691.5 45 50243.0 46 55423.0 47 60603.0 48 68580.0 49 76557.0 50 77882.5 51 79208.0 52 72873.5 53 66539.0 54 62215.5 55 57892.0 56 55668.0 57 53444.0 58 50249.0 59 47054.0 60 41639.5 61 36225.0 62 32844.0 63 29463.0 64 25367.5 65 21272.0 66 18730.5 67 16189.0 68 13849.5 69 11510.0 70 9604.0 71 7698.0 72 6471.0 73 5244.0 74 4346.0 75 2696.0 76 1944.0 77 1289.0 78 634.0 79 505.5 80 377.0 81 312.5 82 248.0 83 164.5 84 81.0 85 56.5 86 32.0 87 22.0 88 12.0 89 8.0 90 4.0 91 2.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 846879.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.271125159191822 #Duplication Level Percentage of deduplicated Percentage of total 1 70.9585221537502 22.18952827381208 2 9.274411294919462 5.800425527624976 3 3.5697727390739438 3.348924303403569 4 2.1641142025368136 2.706971443452532 5 1.5704694701258823 2.455517367949806 6 1.2723960731624073 2.38735541135555 7 1.1356960592814254 2.4860145528813273 8 0.9615774022711875 2.4055685837338276 9 0.8503684674035323 2.393278089804539 >10 8.092925431140777 48.439508086032085 >50 0.10861627853269139 2.229987037882451 >100 0.037935831467595105 2.1149786967229423 >500 0.0015972981670566333 0.412581308022235 >1k 0.0015972981670566333 0.6293613173220535 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGTGACATGTCGTATGCCGTCTTCTGC 1411 0.16661175917693083 RNA PCR Primer, Index 41 (95% over 24bp) CTGTCTCTTATACACATCTGACGCGTGACATGTCGTATGCCGTCTTCTGCT 1307 0.1543313743757963 RNA PCR Primer, Index 41 (96% over 25bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1215 0.14346795705171578 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1107 0.13071524975822993 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 976 0.11524668813372395 No Hit GCTGTCTCTTATACACATCTGACGCGTGACATGTCGTATGCCGTCTTCTGC 959 0.11323931754123079 Illumina PCR Primer Index 3 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.16118005051489057 0.0 2 0.0 0.0 0.0 0.5620637658980799 0.0 3 0.0 0.0 0.0 0.7801586767413055 0.0 4 0.0 0.0 0.0 1.036865951334252 0.0 5 0.0 0.0 0.0 1.5019855256772219 0.0 6 0.0 0.0 0.0 1.8375706564928402 0.0 7 0.0 0.0 0.0 2.262188577116684 0.0 8 0.0 0.0 0.0 2.954141028411379 0.0 9 0.0 0.0 0.0 3.307910575182523 0.0 10 0.0 0.0 0.0 3.9666823713895374 0.0 11 0.0 0.0 0.0 5.266277709094215 0.0 12 0.0 0.0 0.0 6.337150879877763 0.0 13 0.0 0.0 0.0 6.6993041508881435 0.0 14 0.0 0.0 0.0 6.8353330286853256 0.0 15 1.1808062308783191E-4 0.0 0.0 7.017531430109851 0.0 16 1.1808062308783191E-4 0.0 0.0 7.425263821632134 0.0 17 1.1808062308783191E-4 0.0 0.0 7.954619254934885 0.0 18 2.3616124617566382E-4 0.0 0.0 8.521406245756477 0.0 19 2.3616124617566382E-4 0.0 0.0 8.93728620027182 0.0 20 2.3616124617566382E-4 0.0 0.0 9.446804088895817 0.0 21 2.3616124617566382E-4 0.0 0.0 10.178431629548022 0.0 22 2.3616124617566382E-4 0.0 0.0 10.956582935696835 0.0 23 2.3616124617566382E-4 0.0 0.0 11.65998920743105 0.0 24 2.3616124617566382E-4 0.0 0.0 12.183322528956321 0.0 25 3.5424186926349575E-4 0.0 0.0 12.67406559850935 0.0 26 3.5424186926349575E-4 0.0 0.0 13.093606052340418 0.0 27 3.5424186926349575E-4 0.0 0.0 13.611271503957472 0.0 28 3.5424186926349575E-4 0.0 0.0 14.045690116297605 0.0 29 3.5424186926349575E-4 0.0 0.0 14.60539226973393 0.0 30 4.7232249235132763E-4 0.0 0.0 15.346230098986986 0.0 31 4.7232249235132763E-4 0.0 0.0 15.855157584495542 0.0 32 4.7232249235132763E-4 0.0 0.0 16.31708898201514 0.0 33 4.7232249235132763E-4 0.0 0.0 16.790001877481906 0.0 34 4.7232249235132763E-4 0.0 0.0 17.33872253297106 0.0 35 4.7232249235132763E-4 0.0 0.0 17.96242438412099 0.0 36 4.7232249235132763E-4 0.0 0.0 18.477019739537763 0.0 37 4.7232249235132763E-4 0.0 0.0 19.020426766987963 0.0 38 4.7232249235132763E-4 0.0 0.0 19.689825819272883 0.0 39 4.7232249235132763E-4 0.0 0.0 21.236681981723482 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAA 20 7.0322334E-4 45.0 44 TATCTCG 25 3.8899336E-5 45.0 1 ACGTATC 25 3.8899336E-5 45.0 30 TATCGCG 25 3.8899336E-5 45.0 1 CGCCAAT 20 7.0322334E-4 45.0 42 CGTTAGG 285 0.0 42.63158 2 GTTAGGG 1370 0.0 41.551094 3 CGTTTAT 230 0.0 41.08696 1 TCGTTAG 170 0.0 41.029415 1 TCGTTTG 225 0.0 41.0 1 TCGTTCA 55 6.002665E-11 40.909092 16 GCGATGT 165 0.0 40.90909 9 TTTAGGG 3140 0.0 40.270702 3 CCCGATC 45 1.9272193E-8 40.000004 41 TTAGGGA 1660 0.0 39.98494 4 TTAGGGG 3360 0.0 39.776787 4 TAGGGAG 1055 0.0 39.668243 5 TGTAGGG 1220 0.0 39.65164 3 TTTTAGG 1715 0.0 39.620995 2 TCGTAGG 245 0.0 39.489796 2 >>END_MODULE