SRR2934209.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934209.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	926910
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20503	2.2119731149734063	No Hit
CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7667	0.8271568976491785	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTT	4424	0.47728474177644	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCT	3981	0.4294915363951193	No Hit
CGCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTG	3546	0.3825614137294883	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTC	3480	0.3754409813250478	No Hit
CTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGCT	2452	0.26453485235891294	No Hit
CCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGC	2351	0.25363843307332967	No Hit
CGTCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCT	1897	0.20465848895793554	No Hit
CGTTTTTCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTC	1638	0.17671618603747938	No Hit
TCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGC	1511	0.16301474792590434	No Hit
CGTTTTTTCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGT	1339	0.1444584695385744	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCC	1283	0.13841689052874606	No Hit
GCTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTGC	1239	0.13366993559245233	No Hit
CGTTTATGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTT	1204	0.12989394871130963	No Hit
CGTTTACTGTCTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCT	1172	0.12644161784855057	No Hit
CGCTGACTCTTATACACATCTGACGCGCAGCTATTCGTATGCCGTCTTCTG	1032	0.11133767032397968	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAACGG	20	7.0325786E-4	45.0	43
CGTTGTA	20	7.0325786E-4	45.0	19
GCCGATA	20	7.0325786E-4	45.0	9
TCGTGTA	20	7.0325786E-4	45.0	31
CCGTAGG	25	3.8902195E-5	45.0	2
GTGCCGA	20	7.0325786E-4	45.0	21
CGTTTAT	3450	0.0	44.673912	1
CGTTTTT	8445	0.0	44.014206	1
TAGGGCG	360	0.0	42.500004	5
GTTTATT	3475	0.0	42.151077	2
CGTTTCT	575	0.0	41.869564	1
TACGAAT	140	0.0	41.785713	12
TTAGGGA	2235	0.0	41.677853	4
CGTTTTC	570	0.0	41.44737	1
TAGGGGT	975	0.0	41.076923	5
CGTAGGG	280	0.0	40.98214	3
TAGGGAT	1570	0.0	40.700634	5
AGGGCGA	560	0.0	40.580357	6
CTTAGGG	1600	0.0	40.5	3
AGGGATT	985	0.0	40.20305	6