SRR2934207.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934207.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1136548
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGC	4677	0.4115092367414311	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCG	3870	0.3405047565083041	No Hit
GAATCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTC	3172	0.27909072032153504	No Hit
CTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGCT	2703	0.23782541520463718	No Hit
GCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGC	2483	0.21846855566152948	No Hit
CCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGC	2418	0.2127494835237931	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1995	0.1755315217659087	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	1789	0.15740646237554418	No Hit
TCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGC	1753	0.1542389762684902	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC	1565	0.1376976599316527	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCGAT	20	7.033252E-4	45.000004	16
CGACATA	20	7.033252E-4	45.000004	15
ACGGGTA	55	1.8189894E-12	45.000004	5
TTATCCG	20	7.033252E-4	45.000004	1
TCGAAAC	25	3.8907772E-5	45.000004	33
TCGTTAG	140	0.0	45.0	1
CGTTAGG	360	0.0	44.375004	2
TTAGGGA	2045	0.0	41.809296	4
TTTAGGG	3940	0.0	41.744926	3
TTAGGGT	800	0.0	41.343754	4
CACGACC	895	0.0	41.22905	27
CGACCAA	885	0.0	41.18644	29
GCGTTAG	170	0.0	41.02941	1
CGTTTAT	390	0.0	40.961536	1
ACGACCA	900	0.0	40.75	28
ACACGTG	845	0.0	40.739647	42
TGTAGGG	1480	0.0	40.591217	3
TAGGGAG	1375	0.0	40.58182	5
ACACGAC	910	0.0	40.54945	26
CCGATGA	100	0.0	40.500004	18