##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934195.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1354209 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.34566599394923 33.0 31.0 34.0 31.0 34.0 2 32.55710233796999 34.0 31.0 34.0 31.0 34.0 3 32.49687751299836 34.0 31.0 34.0 31.0 34.0 4 36.052687583674306 37.0 35.0 37.0 35.0 37.0 5 35.17074986209662 37.0 35.0 37.0 35.0 37.0 6 26.023740796287722 37.0 0.0 37.0 0.0 37.0 7 31.04686425802812 37.0 19.0 37.0 17.0 37.0 8 34.76385476687867 37.0 32.0 37.0 32.0 37.0 9 37.295677402823344 39.0 37.0 39.0 35.0 39.0 10 37.495039539687006 39.0 37.0 39.0 35.0 39.0 11 37.52699398689567 39.0 37.0 39.0 35.0 39.0 12 37.145446530040786 39.0 37.0 39.0 34.0 39.0 13 37.11480281108751 39.0 37.0 39.0 34.0 39.0 14 38.053979112529895 40.0 37.0 41.0 33.0 41.0 15 38.25225796018192 40.0 38.0 41.0 33.0 41.0 16 38.40086796055853 40.0 38.0 41.0 34.0 41.0 17 38.386994917328124 40.0 37.0 41.0 34.0 41.0 18 38.286081395117 40.0 37.0 41.0 34.0 41.0 19 38.18367327347551 40.0 37.0 41.0 34.0 41.0 20 37.995598168377256 40.0 35.0 41.0 34.0 41.0 21 37.851138930549126 40.0 35.0 41.0 33.0 41.0 22 37.841600521042174 39.0 35.0 41.0 34.0 41.0 23 37.77464778331853 39.0 35.0 41.0 34.0 41.0 24 37.71015109189202 39.0 35.0 41.0 34.0 41.0 25 37.59220474830695 39.0 35.0 41.0 34.0 41.0 26 37.542017517237 39.0 35.0 41.0 33.0 41.0 27 37.510059377836065 39.0 35.0 41.0 33.0 41.0 28 37.393015406041464 39.0 35.0 41.0 33.0 41.0 29 37.300545927548846 39.0 35.0 41.0 33.0 41.0 30 36.97011465733871 39.0 35.0 41.0 33.0 41.0 31 36.860401164074375 39.0 35.0 41.0 32.0 41.0 32 36.625893787443445 39.0 35.0 41.0 31.0 41.0 33 36.300471345265024 39.0 35.0 41.0 30.0 41.0 34 35.92469995399529 39.0 35.0 41.0 29.0 41.0 35 35.74190394540282 39.0 35.0 41.0 28.0 41.0 36 35.619585307733146 39.0 35.0 41.0 27.0 41.0 37 35.533268498437096 39.0 35.0 41.0 27.0 41.0 38 35.433749148026635 38.0 35.0 41.0 26.0 41.0 39 35.35248990370024 38.0 35.0 41.0 25.0 41.0 40 35.22491579955531 38.0 35.0 40.0 24.0 41.0 41 35.06372650011926 38.0 35.0 40.0 23.0 41.0 42 34.995598906815715 38.0 34.0 40.0 23.0 41.0 43 34.900089277209055 38.0 34.0 40.0 23.0 41.0 44 34.73874121350545 38.0 34.0 40.0 23.0 41.0 45 34.68519482590944 38.0 34.0 40.0 23.0 41.0 46 34.633966396619726 37.0 34.0 40.0 23.0 41.0 47 34.56406138195803 37.0 34.0 40.0 23.0 41.0 48 34.50362979421936 37.0 34.0 40.0 23.0 41.0 49 34.464072384690986 37.0 34.0 40.0 23.0 41.0 50 34.34360944285557 37.0 34.0 40.0 23.0 41.0 51 33.34512398012419 35.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 9.0 10 12.0 11 19.0 12 11.0 13 17.0 14 19.0 15 46.0 16 121.0 17 223.0 18 406.0 19 719.0 20 1347.0 21 2171.0 22 3485.0 23 5717.0 24 10188.0 25 16742.0 26 23086.0 27 25568.0 28 24919.0 29 24141.0 30 26358.0 31 31784.0 32 42425.0 33 67855.0 34 98984.0 35 109576.0 36 126061.0 37 195797.0 38 258176.0 39 258068.0 40 152.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.732982132004736 4.052550234121912 50.367336208812674 23.84713142506068 2 27.653412434860495 3.74883049809889 48.201274692458846 20.39648237458177 3 19.5847908262314 3.8949674680939204 54.62738764843535 21.89285405723932 4 17.88328094112504 4.340245855698788 54.148879530412216 23.627593672763954 5 17.31091729563162 7.626001599457691 52.30610636910551 22.756974735805183 6 15.670107051422638 30.727014810860066 40.82818826340691 12.774689874310392 7 77.60648467112536 1.8401147828732491 15.973605255909536 4.579795290091854 8 79.21472977952443 1.9632863169569839 14.631197990856656 4.19078591266193 9 73.74784837495541 3.724978936043107 16.940590411081303 5.586582277920173 10 42.19511168512394 20.67590748547676 23.020818795326274 14.108162034073027 11 31.84530600520304 19.742373592259394 30.505778650119737 17.90654175241783 12 28.328197493887576 17.491022434498664 34.37179933082707 19.808980740786687 13 25.456114971913497 17.06287581902055 37.24550641739938 20.235502791666573 14 19.797461100908354 18.252943231066993 40.83498189718131 21.11461377084335 15 18.736472730575564 19.356761031716673 41.526160289881396 20.380605947826368 16 24.798240153477046 19.87292951088052 36.258066517059035 19.070763818583394 17 24.400443358447625 20.862880101963583 34.951695048548636 19.784981491040156 18 24.322464257732744 20.786525565846926 35.19109679525096 19.699913381169377 19 23.506046703278447 24.166062993230735 32.66416040655468 19.663729896936143 20 23.186007477427783 27.198755878893138 31.084271334779196 18.530965308899884 21 23.445125530844944 24.899701597020844 33.610986191939354 18.04418668019486 22 22.00709048603281 21.20758317216914 35.28716763808245 21.4981587037156 23 21.441372786623038 22.564980737832936 34.308145936114734 21.685500539429288 24 21.765621111660018 23.419206341118688 33.393073004240854 21.42209954298044 25 23.835981004409216 22.99246275870268 30.83445760587915 22.33709863100895 26 20.5930546909672 22.798622664596085 32.11845438924124 24.489868255195468 27 20.681224242343685 21.574808615213755 34.490171014961504 23.25379612748106 28 20.016703477823587 23.48573964580061 31.952231893304507 24.5453249830713 29 22.521708244443804 24.348604978995116 30.746140366811918 22.38354640974916 30 24.714870452049865 22.330452684925294 32.00303645892178 20.95164040410306 31 23.61851087978296 23.501173009483765 31.7309218887188 21.149394222014475 32 26.174763275092694 23.53440273990204 29.035769220260683 21.255064764744585 33 26.087332162169947 23.62995667581592 29.005567087502744 21.277144074511394 34 22.169251570473982 25.852656421571556 31.35114299196062 20.62694901599384 35 22.669469779037062 28.186934217687227 28.682057200919502 20.46153880235621 36 24.353995579707416 27.97773460374285 26.51444496381282 21.15382485273691 37 24.079001099534857 27.762110575250944 26.44392409148071 21.714964233733493 38 24.8312483523592 25.522426745059295 27.056680320393678 22.58964458218783 39 24.004197284171056 23.482490516604155 26.63687805944282 25.876434139781967 40 25.538746234886933 22.110767244937822 28.363199476594826 23.987287043580423 41 21.858147449913563 22.45207349825618 28.434458787380677 27.25532026444958 42 21.23113935884343 22.931024679351562 30.303224982259014 25.53461097954599 43 21.31133377491953 21.949861505868 31.802771950267644 24.936032768944823 44 23.30770213460404 22.47762346875556 29.917833953252416 24.296840443387985 45 22.456208753597117 22.099986043513226 29.040790601746114 26.40301460114355 46 21.966033308004896 23.063279006416295 29.940208638400716 25.030479047178094 47 20.556649675197846 23.795809952525794 31.765628496044556 23.881911876231808 48 21.21075845752022 24.10787404307607 30.620162766603976 24.061204732799737 49 23.7427900715473 22.096441538935274 29.823018455792273 24.33774993372515 50 21.275150290686298 22.605299477407108 30.2137262416658 25.905823990240794 51 20.532133518533698 22.436270915346153 30.134934858651803 26.896660707468346 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 343.0 1 947.0 2 1551.0 3 20210.0 4 38869.0 5 25392.5 6 11916.0 7 11528.0 8 11140.0 9 11095.0 10 11050.0 11 10732.5 12 10415.0 13 9860.0 14 9305.0 15 8805.5 16 8306.0 17 7765.5 18 7225.0 19 6771.0 20 6317.0 21 6221.5 22 6126.0 23 6391.0 24 6656.0 25 7289.0 26 8750.5 27 9579.0 28 10746.0 29 11913.0 30 13771.0 31 15629.0 32 18406.5 33 21184.0 34 23923.0 35 26662.0 36 28328.0 37 29994.0 38 32603.5 39 35213.0 40 38107.5 41 41002.0 42 45701.0 43 50400.0 44 59278.5 45 68157.0 46 83659.0 47 99161.0 48 113670.0 49 128179.0 50 129058.0 51 129937.0 52 117066.5 53 104196.0 54 94401.5 55 84607.0 56 79307.5 57 74008.0 58 70646.0 59 67284.0 60 61236.0 61 55188.0 62 50609.5 63 46031.0 64 41217.5 65 36404.0 66 31725.5 67 27047.0 68 23224.5 69 19402.0 70 16294.5 71 13187.0 72 11001.5 73 8816.0 74 7571.5 75 5062.0 76 3797.0 77 2922.5 78 2048.0 79 1484.5 80 921.0 81 636.5 82 352.0 83 294.0 84 236.0 85 159.5 86 83.0 87 75.5 88 68.0 89 51.0 90 34.0 91 23.5 92 13.0 93 8.0 94 3.0 95 4.0 96 5.0 97 3.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1354209.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.30709626022236 #Duplication Level Percentage of deduplicated Percentage of total 1 71.96599929974633 27.56808462638478 2 8.597697946369692 6.587056856957998 3 3.950324915137502 4.539764303499811 4 2.690493850700037 4.122600277052106 5 2.1206104824126926 4.061721494010979 6 1.7469795137813522 4.015302743943523 7 1.4974785290027408 4.015483791068691 8 1.241263553906431 3.8039361955039483 9 1.075045319801315 3.7063678094757453 >10 4.9605568767050325 27.92060923924501 >50 0.09585306239984655 2.560247007113829 >100 0.05285350235210344 3.409098445376447 >500 0.0023162880232833597 0.5828771986820057 >1k 0.002105716384803054 1.2448856638886512 >5k 2.1057163848030544E-4 0.5198787082072415 >10k+ 2.1057163848030544E-4 1.3420856395891518 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16638 1.2286138993316393 No Hit CGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6445 0.4759235834350532 No Hit CGTTTCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTT 2138 0.15787814140948703 No Hit CGCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCTG 1960 0.1447339369329254 TruSeq Adapter, Index 15 (95% over 21bp) CGTTTTCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCT 1819 0.13432195473519967 No Hit CGTTCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTC 1771 0.13077745015725048 No Hit CTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCTGCT 1577 0.11645174415470581 TruSeq Adapter, Index 15 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCTGC 1572 0.1160825249278361 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1386 0.10234756968828297 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12605144405331822 0.0 2 0.0 0.0 0.0 0.3709914791586823 0.0 3 0.0 0.0 0.0 0.6491612446823201 0.0 4 0.0 0.0 0.0 0.9502226022718797 0.0 5 0.0 0.0 0.0 1.6589019863255967 0.0 6 0.0 0.0 0.0 2.781771499081752 0.0 7 0.0 0.0 0.0 4.165974380616286 0.0 8 0.0 0.0 0.0 6.118627183839422 0.0 9 0.0 0.0 0.0 7.765861842595936 0.0 10 0.0 0.0 0.0 9.539517164632638 0.0 11 0.0 0.0 0.0 11.289985519221922 0.0 12 0.0 0.0 0.0 12.461148906852635 0.0 13 0.0 0.0 0.0 12.98019729598607 0.0 14 0.0 0.0 0.0 13.415211389083959 0.0 15 0.0 0.0 0.0 13.671597220222285 0.0 16 0.0 0.0 0.0 13.95980974871678 0.0 17 0.0 0.0 0.0 14.327256723297511 0.0 18 0.0 0.0 0.0 14.748978924228092 0.0 19 0.0 0.0 0.0 15.060378420170004 0.0 20 0.0 0.0 0.0 15.445917136867353 0.0 21 0.0 0.0 0.0 15.915120930373376 0.0 22 0.0 0.0 0.0 16.44989805857146 0.0 23 0.0 0.0 0.0 16.946128699484348 0.0 24 0.0 0.0 0.0 17.341857866843302 0.0 25 0.0 0.0 0.0 17.69313303928714 0.0 26 0.0 0.0 0.0 18.02092586890207 0.0 27 0.0 0.0 0.0 18.390588158844018 0.0 28 7.384384537394154E-5 0.0 0.0 18.726282279913956 0.0 29 7.384384537394154E-5 0.0 0.0 19.140472408616397 0.0 30 7.384384537394154E-5 0.0 0.0 19.667865152277084 0.0 31 7.384384537394154E-5 0.0 0.0 20.055102277418037 0.0 32 7.384384537394154E-5 0.0 0.0 20.47763676064773 0.0 33 7.384384537394154E-5 0.0 0.0 20.85534802973544 0.0 34 1.4768769074788307E-4 0.0 0.0 21.310373804929668 0.0 35 1.4768769074788307E-4 0.0 0.0 21.80054925052189 0.0 36 1.4768769074788307E-4 0.0 0.0 22.234086466712302 0.0 37 1.4768769074788307E-4 0.0 0.0 22.67316197130576 0.0 38 2.2153153612182463E-4 0.0 0.0 23.279419941825818 0.0 39 2.2153153612182463E-4 0.0 0.0 24.448958764858304 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTTAG 60 0.0 45.000004 1 CGTTTAT 3595 0.0 44.18637 1 TCGTTAG 225 0.0 44.0 1 CGTTTTT 8600 0.0 43.639534 1 CGTTAGG 375 0.0 42.6 2 GTTTATT 3810 0.0 41.811028 2 CACGACC 465 0.0 40.64516 27 TTTAGGG 4430 0.0 40.174946 3 TTAGGGA 2225 0.0 40.146065 4 CGTTATT 400 0.0 39.9375 1 TCAAGCG 485 0.0 39.896908 17 TAGGGAC 910 0.0 39.80769 5 ACGACCA 475 0.0 39.789474 28 GTTAGGG 1660 0.0 39.713856 3 TTGTTAG 720 0.0 39.6875 1 AGGGCGA 760 0.0 39.671055 6 TTAGGGG 4570 0.0 39.28884 4 TAGGGAT 1225 0.0 39.122448 5 TGTAGGG 1785 0.0 38.949577 3 CTTAGGG 2245 0.0 38.886414 3 >>END_MODULE